Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0636:0637
Extra
PDB:
ATOM 1 O3' U A 635 47.525 104.908 46.607 1.00 31.08 O
ATOM 2 P G A 636 46.987 103.405 46.389 1.00 35.07 P
ATOM 3 OP1 G A 636 46.801 103.245 44.919 1.00 36.58 O
ATOM 4 OP2 G A 636 45.838 103.163 47.310 1.00 30.20 O
ATOM 5 O5' G A 636 48.215 102.481 46.821 1.00 33.26 O
ATOM 6 C5' G A 636 49.412 102.457 46.029 1.00 33.29 C
ATOM 7 C4' G A 636 50.485 101.641 46.699 1.00 34.89 C
ATOM 8 O4' G A 636 50.905 102.274 47.935 1.00 36.30 O
ATOM 9 C3' G A 636 50.110 100.246 47.146 1.00 36.77 C
ATOM 10 O3' G A 636 50.088 99.334 46.066 1.00 39.99 O
ATOM 11 C2' G A 636 51.226 99.936 48.133 1.00 35.78 C
ATOM 12 O2' G A 636 52.446 99.640 47.486 1.00 37.92 O
ATOM 13 C1' G A 636 51.371 101.281 48.840 1.00 33.69 C
ATOM 14 N9 G A 636 50.580 101.356 50.066 1.00 32.32 N
ATOM 15 C8 G A 636 49.325 101.899 50.220 1.00 31.07 C
ATOM 16 N7 G A 636 48.881 101.822 51.446 1.00 28.44 N
ATOM 17 C5 G A 636 49.900 101.190 52.141 1.00 26.73 C
ATOM 18 C6 G A 636 49.993 100.841 53.507 1.00 26.14 C
ATOM 19 O6 G A 636 49.169 101.025 54.403 1.00 23.84 O
ATOM 20 N1 G A 636 51.199 100.212 53.792 1.00 25.91 N
ATOM 21 C2 G A 636 52.184 99.952 52.877 1.00 28.01 C
ATOM 22 N2 G A 636 53.265 99.329 53.336 1.00 30.53 N
ATOM 23 N3 G A 636 52.113 100.278 51.599 1.00 29.30 N
ATOM 24 C4 G A 636 50.952 100.891 51.303 1.00 29.13 C
ATOM 25 P U A 637 49.061 98.099 46.098 1.00 42.08 P
ATOM 26 OP1 U A 637 49.128 97.480 44.754 1.00 44.48 O
ATOM 27 OP2 U A 637 47.746 98.534 46.646 1.00 39.81 O
ATOM 28 O5' U A 637 49.707 97.092 47.145 1.00 39.90 O
TER
ATOM 1 O3' G B 636 50.088 99.334 46.066 1.00 39.99 O
ATOM 2 P U B 637 49.061 98.099 46.098 1.00 42.08 P
ATOM 3 OP1 U B 637 49.128 97.480 44.754 1.00 44.48 O
ATOM 4 OP2 U B 637 47.746 98.534 46.646 1.00 39.81 O
ATOM 5 O5' U B 637 49.707 97.092 47.145 1.00 39.90 O
ATOM 6 C5' U B 637 50.994 96.518 46.910 1.00 37.43 C
ATOM 7 C4' U B 637 51.500 95.855 48.165 1.00 37.40 C
ATOM 8 O4' U B 637 51.650 96.857 49.210 1.00 36.71 O
ATOM 9 C3' U B 637 50.576 94.837 48.808 1.00 38.37 C
ATOM 10 O3' U B 637 50.585 93.566 48.165 1.00 39.14 O
ATOM 11 C2' U B 637 51.126 94.785 50.227 1.00 37.49 C
ATOM 12 O2' U B 637 52.338 94.054 50.310 1.00 34.12 O
ATOM 13 C1' U B 637 51.410 96.266 50.477 1.00 33.80 C
ATOM 14 N1 U B 637 50.296 96.970 51.134 1.00 31.08 N
ATOM 15 C2 U B 637 50.208 96.886 52.519 1.00 31.28 C
ATOM 16 O2 U B 637 51.017 96.275 53.201 1.00 32.95 O
ATOM 17 N3 U B 637 49.144 97.549 53.078 1.00 28.13 N
ATOM 18 C4 U B 637 48.188 98.284 52.418 1.00 29.95 C
ATOM 19 O4 U B 637 47.279 98.818 53.064 1.00 30.06 O
ATOM 20 C5 U B 637 48.353 98.336 50.997 1.00 29.18 C
ATOM 21 C6 U B 637 49.371 97.688 50.419 1.00 29.56 C
ATOM 22 P C B 638 49.326 92.578 48.353 1.00 38.02 P
ATOM 23 OP1 C B 638 49.598 91.372 47.542 1.00 37.16 O
ATOM 24 OP2 C B 638 48.065 93.335 48.155 1.00 37.83 O
ATOM 25 O5' C B 638 49.389 92.179 49.887 1.00 35.89 O
TER
ATOM 2 P G A 636 46.987 103.405 46.389 1.00 35.07 P
ATOM 3 OP1 G A 636 46.801 103.245 44.919 1.00 36.58 O
ATOM 4 OP2 G A 636 45.838 103.163 47.310 1.00 30.20 O
ATOM 5 O5' G A 636 48.215 102.481 46.821 1.00 33.26 O
ATOM 6 C5' G A 636 49.412 102.457 46.029 1.00 33.29 C
ATOM 7 C4' G A 636 50.485 101.641 46.699 1.00 34.89 C
ATOM 8 O4' G A 636 50.905 102.274 47.935 1.00 36.30 O
ATOM 9 C3' G A 636 50.110 100.246 47.146 1.00 36.77 C
ATOM 10 O3' G A 636 50.088 99.334 46.066 1.00 39.99 O
ATOM 11 C2' G A 636 51.226 99.936 48.133 1.00 35.78 C
ATOM 12 O2' G A 636 52.446 99.640 47.486 1.00 37.92 O
ATOM 13 C1' G A 636 51.371 101.281 48.840 1.00 33.69 C
ATOM 14 N9 G A 636 50.580 101.356 50.066 1.00 32.32 N
ATOM 15 C8 G A 636 49.325 101.899 50.220 1.00 31.07 C
ATOM 16 N7 G A 636 48.881 101.822 51.446 1.00 28.44 N
ATOM 17 C5 G A 636 49.900 101.190 52.141 1.00 26.73 C
ATOM 18 C6 G A 636 49.993 100.841 53.507 1.00 26.14 C
ATOM 19 O6 G A 636 49.169 101.025 54.403 1.00 23.84 O
ATOM 20 N1 G A 636 51.199 100.212 53.792 1.00 25.91 N
ATOM 21 C2 G A 636 52.184 99.952 52.877 1.00 28.01 C
ATOM 22 N2 G A 636 53.265 99.329 53.336 1.00 30.53 N
ATOM 23 N3 G A 636 52.113 100.278 51.599 1.00 29.30 N
ATOM 24 C4 G A 636 50.952 100.891 51.303 1.00 29.13 C
ATOM 25 P U A 637 49.061 98.099 46.098 1.00 42.08 P
ATOM 26 OP1 U A 637 49.128 97.480 44.754 1.00 44.48 O
ATOM 27 OP2 U A 637 47.746 98.534 46.646 1.00 39.81 O
ATOM 28 O5' U A 637 49.707 97.092 47.145 1.00 39.90 O
TER
ATOM 1 O3' G B 636 50.088 99.334 46.066 1.00 39.99 O
ATOM 2 P U B 637 49.061 98.099 46.098 1.00 42.08 P
ATOM 3 OP1 U B 637 49.128 97.480 44.754 1.00 44.48 O
ATOM 4 OP2 U B 637 47.746 98.534 46.646 1.00 39.81 O
ATOM 5 O5' U B 637 49.707 97.092 47.145 1.00 39.90 O
ATOM 6 C5' U B 637 50.994 96.518 46.910 1.00 37.43 C
ATOM 7 C4' U B 637 51.500 95.855 48.165 1.00 37.40 C
ATOM 8 O4' U B 637 51.650 96.857 49.210 1.00 36.71 O
ATOM 9 C3' U B 637 50.576 94.837 48.808 1.00 38.37 C
ATOM 10 O3' U B 637 50.585 93.566 48.165 1.00 39.14 O
ATOM 11 C2' U B 637 51.126 94.785 50.227 1.00 37.49 C
ATOM 12 O2' U B 637 52.338 94.054 50.310 1.00 34.12 O
ATOM 13 C1' U B 637 51.410 96.266 50.477 1.00 33.80 C
ATOM 14 N1 U B 637 50.296 96.970 51.134 1.00 31.08 N
ATOM 15 C2 U B 637 50.208 96.886 52.519 1.00 31.28 C
ATOM 16 O2 U B 637 51.017 96.275 53.201 1.00 32.95 O
ATOM 17 N3 U B 637 49.144 97.549 53.078 1.00 28.13 N
ATOM 18 C4 U B 637 48.188 98.284 52.418 1.00 29.95 C
ATOM 19 O4 U B 637 47.279 98.818 53.064 1.00 30.06 O
ATOM 20 C5 U B 637 48.353 98.336 50.997 1.00 29.18 C
ATOM 21 C6 U B 637 49.371 97.688 50.419 1.00 29.56 C
ATOM 22 P C B 638 49.326 92.578 48.353 1.00 38.02 P
ATOM 23 OP1 C B 638 49.598 91.372 47.542 1.00 37.16 O
ATOM 24 OP2 C B 638 48.065 93.335 48.155 1.00 37.83 O
ATOM 25 O5' C B 638 49.389 92.179 49.887 1.00 35.89 O
TER
Atoms:
OP1: (46.801,103.245,44.919)
OP2: (45.838,103.163,47.310)
C3': (50.110,100.246,47.146)
C1': (51.371,101.281,48.840)
C5': (49.412,102.457,46.029)
O6: (49.169,101.025,54.403)
O4': (50.905,102.274,47.935)
C8: (49.325,101.899,50.220)
C2: (52.184,99.952,52.877)
C6: (49.993,100.841,53.507)
C5: (49.900,101.190,52.141)
C4: (50.952,100.891,51.303)
P: (46.987,103.405,46.389)
C4': (50.485,101.641,46.699)
C2': (51.226,99.936,48.133)
O2': (52.446,99.640,47.486)
N1: (51.199,100.212,53.792)
N2: (53.265,99.329,53.336)
N3: (52.113,100.278,51.599)
N7: (48.881,101.822,51.446)
N9: (50.580,101.356,50.066)
O5': (48.215,102.481,46.821)
O3': (50.088,99.334,46.066)
OP2: (45.838,103.163,47.310)
C3': (50.110,100.246,47.146)
C1': (51.371,101.281,48.840)
C5': (49.412,102.457,46.029)
O6: (49.169,101.025,54.403)
O4': (50.905,102.274,47.935)
C8: (49.325,101.899,50.220)
C2: (52.184,99.952,52.877)
C6: (49.993,100.841,53.507)
C5: (49.900,101.190,52.141)
C4: (50.952,100.891,51.303)
P: (46.987,103.405,46.389)
C4': (50.485,101.641,46.699)
C2': (51.226,99.936,48.133)
O2': (52.446,99.640,47.486)
N1: (51.199,100.212,53.792)
N2: (53.265,99.329,53.336)
N3: (52.113,100.278,51.599)
N7: (48.881,101.822,51.446)
N9: (50.580,101.356,50.066)
O5': (48.215,102.481,46.821)
O3': (50.088,99.334,46.066)
C4: (48.188,98.284,52.418)
N3: (49.144,97.549,53.078)
OP1: (49.128,97.480,44.754)
OP2: (47.746,98.534,46.646)
C2: (50.208,96.886,52.519)
C1': (51.410,96.266,50.477)
C3': (50.576,94.837,48.808)
O5': (49.707,97.092,47.145)
O4': (51.650,96.857,49.210)
C5': (50.994,96.518,46.910)
P: (49.061,98.099,46.098)
C4': (51.500,95.855,48.165)
C2': (51.126,94.785,50.227)
O2': (52.338,94.054,50.310)
N1: (50.296,96.970,51.134)
O4: (47.279,98.818,53.064)
O2: (51.017,96.275,53.201)
C6: (49.371,97.688,50.419)
C5: (48.353,98.336,50.997)
O3': (50.585,93.566,48.165)
N3: (49.144,97.549,53.078)
OP1: (49.128,97.480,44.754)
OP2: (47.746,98.534,46.646)
C2: (50.208,96.886,52.519)
C1': (51.410,96.266,50.477)
C3': (50.576,94.837,48.808)
O5': (49.707,97.092,47.145)
O4': (51.650,96.857,49.210)
C5': (50.994,96.518,46.910)
P: (49.061,98.099,46.098)
C4': (51.500,95.855,48.165)
C2': (51.126,94.785,50.227)
O2': (52.338,94.054,50.310)
N1: (50.296,96.970,51.134)
O4: (47.279,98.818,53.064)
O2: (51.017,96.275,53.201)
C6: (49.371,97.688,50.419)
C5: (48.353,98.336,50.997)
O3': (50.585,93.566,48.165)
Image (generated by PyMOL):