Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5O:B85:B86
Extra
PDB:
ATOM 1 O3' G A 84 107.582 30.859 32.395 1.00113.39 O
ATOM 2 P G A 85 108.275 32.067 33.191 1.00106.09 P
ATOM 3 OP1 G A 85 109.680 32.149 32.721 1.00116.18 O
ATOM 4 OP2 G A 85 107.995 31.890 34.637 1.00105.75 O
ATOM 5 O5' G A 85 107.496 33.356 32.675 1.00103.26 O
ATOM 6 C5' G A 85 107.491 33.693 31.291 1.00107.69 C
ATOM 7 C4' G A 85 106.474 34.774 31.021 1.00114.13 C
ATOM 8 O4' G A 85 105.144 34.262 31.300 1.00116.71 O
ATOM 9 C3' G A 85 106.587 36.005 31.903 1.00118.79 C
ATOM 10 O3' G A 85 107.557 36.917 31.407 1.00120.49 O
ATOM 11 C2' G A 85 105.180 36.579 31.828 1.00118.66 C
ATOM 12 O2' G A 85 104.945 37.313 30.642 1.00119.95 O
ATOM 13 C1' G A 85 104.338 35.301 31.833 1.00118.97 C
ATOM 14 N9 G A 85 103.925 34.916 33.178 1.00116.64 N
ATOM 15 C8 G A 85 104.267 33.772 33.859 1.00115.96 C
ATOM 16 N7 G A 85 103.747 33.714 35.055 1.00115.72 N
ATOM 17 C5 G A 85 103.015 34.889 35.170 1.00115.38 C
ATOM 18 C6 G A 85 102.231 35.384 36.246 1.00114.99 C
ATOM 19 O6 G A 85 102.019 34.866 37.350 1.00114.79 O
ATOM 20 N1 G A 85 101.664 36.617 35.938 1.00115.33 N
ATOM 21 C2 G A 85 101.827 37.289 34.751 1.00115.59 C
ATOM 22 N2 G A 85 101.198 38.469 34.644 1.00115.41 N
ATOM 23 N3 G A 85 102.553 36.837 33.742 1.00115.49 N
ATOM 24 C4 G A 85 103.114 35.641 34.019 1.00115.60 C
ATOM 25 P U A 86 108.502 37.707 32.438 1.00121.56 P
ATOM 26 OP1 U A 86 109.488 38.491 31.653 1.00122.88 O
ATOM 27 OP2 U A 86 108.978 36.722 33.444 1.00113.83 O
ATOM 28 O5' U A 86 107.514 38.720 33.173 1.00122.94 O
TER
ATOM 1 O3' G B 85 107.557 36.917 31.407 1.00120.49 O
ATOM 2 P U B 86 108.502 37.707 32.438 1.00121.56 P
ATOM 3 OP1 U B 86 109.488 38.491 31.653 1.00122.88 O
ATOM 4 OP2 U B 86 108.978 36.722 33.444 1.00113.83 O
ATOM 5 O5' U B 86 107.514 38.720 33.173 1.00122.94 O
ATOM 6 C5' U B 86 106.948 39.825 32.475 1.00122.75 C
ATOM 7 C4' U B 86 106.068 40.636 33.398 1.00124.15 C
ATOM 8 O4' U B 86 104.938 39.828 33.825 1.00120.10 O
ATOM 9 C3' U B 86 106.705 41.083 34.703 1.00127.13 C
ATOM 10 O3' U B 86 107.486 42.261 34.532 1.00135.57 O
ATOM 11 C2' U B 86 105.483 41.337 35.575 1.00123.03 C
ATOM 12 O2' U B 86 104.859 42.574 35.294 1.00120.32 O
ATOM 13 C1' U B 86 104.567 40.188 35.148 1.00117.28 C
ATOM 14 N1 U B 86 104.710 39.005 36.010 1.00111.03 N
ATOM 15 C2 U B 86 103.923 38.937 37.146 1.00109.64 C
ATOM 16 O2 U B 86 103.123 39.806 37.450 1.00109.16 O
ATOM 17 N3 U B 86 104.109 37.813 37.913 1.00108.01 N
ATOM 18 C4 U B 86 104.983 36.773 37.664 1.00107.76 C
ATOM 19 O4 U B 86 105.036 35.825 38.448 1.00106.29 O
ATOM 20 C5 U B 86 105.758 36.918 36.470 1.00108.73 C
ATOM 21 C6 U B 86 105.599 38.001 35.703 1.00110.37 C
ATOM 22 P G B 87 108.684 42.574 35.558 1.00138.01 P
ATOM 23 OP1 G B 87 109.552 43.614 34.947 1.00136.23 O
ATOM 24 OP2 G B 87 109.272 41.271 35.958 1.00133.17 O
ATOM 25 O5' G B 87 107.956 43.203 36.830 1.00142.81 O
TER
ATOM 2 P G A 85 108.275 32.067 33.191 1.00106.09 P
ATOM 3 OP1 G A 85 109.680 32.149 32.721 1.00116.18 O
ATOM 4 OP2 G A 85 107.995 31.890 34.637 1.00105.75 O
ATOM 5 O5' G A 85 107.496 33.356 32.675 1.00103.26 O
ATOM 6 C5' G A 85 107.491 33.693 31.291 1.00107.69 C
ATOM 7 C4' G A 85 106.474 34.774 31.021 1.00114.13 C
ATOM 8 O4' G A 85 105.144 34.262 31.300 1.00116.71 O
ATOM 9 C3' G A 85 106.587 36.005 31.903 1.00118.79 C
ATOM 10 O3' G A 85 107.557 36.917 31.407 1.00120.49 O
ATOM 11 C2' G A 85 105.180 36.579 31.828 1.00118.66 C
ATOM 12 O2' G A 85 104.945 37.313 30.642 1.00119.95 O
ATOM 13 C1' G A 85 104.338 35.301 31.833 1.00118.97 C
ATOM 14 N9 G A 85 103.925 34.916 33.178 1.00116.64 N
ATOM 15 C8 G A 85 104.267 33.772 33.859 1.00115.96 C
ATOM 16 N7 G A 85 103.747 33.714 35.055 1.00115.72 N
ATOM 17 C5 G A 85 103.015 34.889 35.170 1.00115.38 C
ATOM 18 C6 G A 85 102.231 35.384 36.246 1.00114.99 C
ATOM 19 O6 G A 85 102.019 34.866 37.350 1.00114.79 O
ATOM 20 N1 G A 85 101.664 36.617 35.938 1.00115.33 N
ATOM 21 C2 G A 85 101.827 37.289 34.751 1.00115.59 C
ATOM 22 N2 G A 85 101.198 38.469 34.644 1.00115.41 N
ATOM 23 N3 G A 85 102.553 36.837 33.742 1.00115.49 N
ATOM 24 C4 G A 85 103.114 35.641 34.019 1.00115.60 C
ATOM 25 P U A 86 108.502 37.707 32.438 1.00121.56 P
ATOM 26 OP1 U A 86 109.488 38.491 31.653 1.00122.88 O
ATOM 27 OP2 U A 86 108.978 36.722 33.444 1.00113.83 O
ATOM 28 O5' U A 86 107.514 38.720 33.173 1.00122.94 O
TER
ATOM 1 O3' G B 85 107.557 36.917 31.407 1.00120.49 O
ATOM 2 P U B 86 108.502 37.707 32.438 1.00121.56 P
ATOM 3 OP1 U B 86 109.488 38.491 31.653 1.00122.88 O
ATOM 4 OP2 U B 86 108.978 36.722 33.444 1.00113.83 O
ATOM 5 O5' U B 86 107.514 38.720 33.173 1.00122.94 O
ATOM 6 C5' U B 86 106.948 39.825 32.475 1.00122.75 C
ATOM 7 C4' U B 86 106.068 40.636 33.398 1.00124.15 C
ATOM 8 O4' U B 86 104.938 39.828 33.825 1.00120.10 O
ATOM 9 C3' U B 86 106.705 41.083 34.703 1.00127.13 C
ATOM 10 O3' U B 86 107.486 42.261 34.532 1.00135.57 O
ATOM 11 C2' U B 86 105.483 41.337 35.575 1.00123.03 C
ATOM 12 O2' U B 86 104.859 42.574 35.294 1.00120.32 O
ATOM 13 C1' U B 86 104.567 40.188 35.148 1.00117.28 C
ATOM 14 N1 U B 86 104.710 39.005 36.010 1.00111.03 N
ATOM 15 C2 U B 86 103.923 38.937 37.146 1.00109.64 C
ATOM 16 O2 U B 86 103.123 39.806 37.450 1.00109.16 O
ATOM 17 N3 U B 86 104.109 37.813 37.913 1.00108.01 N
ATOM 18 C4 U B 86 104.983 36.773 37.664 1.00107.76 C
ATOM 19 O4 U B 86 105.036 35.825 38.448 1.00106.29 O
ATOM 20 C5 U B 86 105.758 36.918 36.470 1.00108.73 C
ATOM 21 C6 U B 86 105.599 38.001 35.703 1.00110.37 C
ATOM 22 P G B 87 108.684 42.574 35.558 1.00138.01 P
ATOM 23 OP1 G B 87 109.552 43.614 34.947 1.00136.23 O
ATOM 24 OP2 G B 87 109.272 41.271 35.958 1.00133.17 O
ATOM 25 O5' G B 87 107.956 43.203 36.830 1.00142.81 O
TER
Atoms:
OP1: (109.680,32.149,32.721)
OP2: (107.995,31.890,34.637)
C3': (106.587,36.005,31.903)
C1': (104.338,35.301,31.833)
C5': (107.491,33.693,31.291)
O6: (102.019,34.866,37.350)
O4': (105.144,34.262,31.300)
C8: (104.267,33.772,33.859)
C2: (101.827,37.289,34.751)
C6: (102.231,35.384,36.246)
C5: (103.015,34.889,35.170)
C4: (103.114,35.641,34.019)
P: (108.275,32.067,33.191)
C4': (106.474,34.774,31.021)
C2': (105.180,36.579,31.828)
O2': (104.945,37.313,30.642)
N1: (101.664,36.617,35.938)
N2: (101.198,38.469,34.644)
N3: (102.553,36.837,33.742)
N7: (103.747,33.714,35.055)
N9: (103.925,34.916,33.178)
O5': (107.496,33.356,32.675)
O3': (107.557,36.917,31.407)
OP2: (107.995,31.890,34.637)
C3': (106.587,36.005,31.903)
C1': (104.338,35.301,31.833)
C5': (107.491,33.693,31.291)
O6: (102.019,34.866,37.350)
O4': (105.144,34.262,31.300)
C8: (104.267,33.772,33.859)
C2: (101.827,37.289,34.751)
C6: (102.231,35.384,36.246)
C5: (103.015,34.889,35.170)
C4: (103.114,35.641,34.019)
P: (108.275,32.067,33.191)
C4': (106.474,34.774,31.021)
C2': (105.180,36.579,31.828)
O2': (104.945,37.313,30.642)
N1: (101.664,36.617,35.938)
N2: (101.198,38.469,34.644)
N3: (102.553,36.837,33.742)
N7: (103.747,33.714,35.055)
N9: (103.925,34.916,33.178)
O5': (107.496,33.356,32.675)
O3': (107.557,36.917,31.407)
C4: (104.983,36.773,37.664)
N3: (104.109,37.813,37.913)
OP1: (109.488,38.491,31.653)
OP2: (108.978,36.722,33.444)
C2: (103.923,38.937,37.146)
C1': (104.567,40.188,35.148)
C3': (106.705,41.083,34.703)
O5': (107.514,38.720,33.173)
O4': (104.938,39.828,33.825)
C5': (106.948,39.825,32.475)
P: (108.502,37.707,32.438)
C4': (106.068,40.636,33.398)
C2': (105.483,41.337,35.575)
O2': (104.859,42.574,35.294)
N1: (104.710,39.005,36.010)
O4: (105.036,35.825,38.448)
O2: (103.123,39.806,37.450)
C6: (105.599,38.001,35.703)
C5: (105.758,36.918,36.470)
O3': (107.486,42.261,34.532)
N3: (104.109,37.813,37.913)
OP1: (109.488,38.491,31.653)
OP2: (108.978,36.722,33.444)
C2: (103.923,38.937,37.146)
C1': (104.567,40.188,35.148)
C3': (106.705,41.083,34.703)
O5': (107.514,38.720,33.173)
O4': (104.938,39.828,33.825)
C5': (106.948,39.825,32.475)
P: (108.502,37.707,32.438)
C4': (106.068,40.636,33.398)
C2': (105.483,41.337,35.575)
O2': (104.859,42.574,35.294)
N1: (104.710,39.005,36.010)
O4: (105.036,35.825,38.448)
O2: (103.123,39.806,37.450)
C6: (105.599,38.001,35.703)
C5: (105.758,36.918,36.470)
O3': (107.486,42.261,34.532)
Image (generated by PyMOL):