Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIL:A140:A141
Extra
PDB:
ATOM 1 O3' U A 139 43.063 18.603 22.158 1.00 18.56 O
ATOM 2 P G A 140 43.876 17.260 21.819 1.00 17.36 P
ATOM 3 OP1 G A 140 44.662 16.917 23.025 1.00 16.42 O
ATOM 4 OP2 G A 140 44.549 17.389 20.507 1.00 18.29 O
ATOM 5 O5' G A 140 42.709 16.185 21.625 1.00 17.33 O
ATOM 6 C5' G A 140 41.871 15.849 22.719 1.00 17.08 C
ATOM 7 C4' G A 140 40.549 15.286 22.237 1.00 16.89 C
ATOM 8 O4' G A 140 39.884 16.238 21.366 1.00 16.37 O
ATOM 9 C3' G A 140 40.667 14.048 21.368 1.00 16.90 C
ATOM 10 O3' G A 140 40.924 12.891 22.155 1.00 16.85 O
ATOM 11 C2' G A 140 39.297 14.038 20.696 1.00 16.56 C
ATOM 12 O2' G A 140 38.261 13.568 21.536 1.00 17.02 O
ATOM 13 C1' G A 140 39.124 15.529 20.403 1.00 16.87 C
ATOM 14 N9 G A 140 39.579 15.880 19.056 1.00 17.19 N
ATOM 15 C8 G A 140 40.746 16.514 18.694 1.00 16.92 C
ATOM 16 N7 G A 140 40.870 16.682 17.406 1.00 17.02 N
ATOM 17 C5 G A 140 39.715 16.116 16.875 1.00 17.24 C
ATOM 18 C6 G A 140 39.283 15.988 15.528 1.00 17.53 C
ATOM 19 O6 G A 140 39.857 16.370 14.501 1.00 17.19 O
ATOM 20 N1 G A 140 38.047 15.344 15.429 1.00 16.87 N
ATOM 21 C2 G A 140 37.319 14.879 16.501 1.00 17.31 C
ATOM 22 N2 G A 140 36.150 14.285 16.225 1.00 17.00 N
ATOM 23 N3 G A 140 37.712 14.990 17.766 1.00 17.14 N
ATOM 24 C4 G A 140 38.913 15.614 17.879 1.00 17.28 C
ATOM 25 P U A 141 41.956 11.787 21.625 1.00 17.23 P
ATOM 26 OP1 U A 141 42.180 10.822 22.723 1.00 16.52 O
ATOM 27 OP2 U A 141 43.106 12.470 20.990 1.00 16.91 O
ATOM 28 O5' U A 141 41.138 11.089 20.444 1.00 16.79 O
TER
ATOM 1 O3' G B 140 40.924 12.891 22.155 1.00 16.85 O
ATOM 2 P U B 141 41.956 11.787 21.625 1.00 17.23 P
ATOM 3 OP1 U B 141 42.180 10.822 22.723 1.00 16.52 O
ATOM 4 OP2 U B 141 43.106 12.470 20.990 1.00 16.91 O
ATOM 5 O5' U B 141 41.138 11.089 20.444 1.00 16.79 O
ATOM 6 C5' U B 141 39.949 10.349 20.708 1.00 16.60 C
ATOM 7 C4' U B 141 39.272 10.004 19.398 1.00 16.38 C
ATOM 8 O4' U B 141 38.906 11.222 18.702 1.00 16.37 O
ATOM 9 C3' U B 141 40.148 9.284 18.381 1.00 16.36 C
ATOM 10 O3' U B 141 40.288 7.910 18.694 1.00 16.74 O
ATOM 11 C2' U B 141 39.348 9.535 17.106 1.00 16.36 C
ATOM 12 O2' U B 141 38.181 8.742 16.999 1.00 16.37 O
ATOM 13 C1' U B 141 38.975 11.001 17.300 1.00 16.01 C
ATOM 14 N1 U B 141 39.938 11.965 16.646 1.00 16.29 N
ATOM 15 C2 U B 141 39.828 12.212 15.282 1.00 16.20 C
ATOM 16 O2 U B 141 38.995 11.691 14.559 1.00 17.17 O
ATOM 17 N3 U B 141 40.742 13.109 14.779 1.00 16.11 N
ATOM 18 C4 U B 141 41.739 13.766 15.483 1.00 15.75 C
ATOM 19 O4 U B 141 42.482 14.540 14.892 1.00 15.63 O
ATOM 20 C5 U B 141 41.798 13.462 16.894 1.00 15.56 C
ATOM 21 C6 U B 141 40.912 12.597 17.409 1.00 15.67 C
ATOM 22 P C B 142 41.731 7.209 18.721 1.00 17.67 P
ATOM 23 OP1 C B 142 41.680 6.181 19.784 1.00 17.17 O
ATOM 24 OP2 C B 142 42.789 8.244 18.731 1.00 17.04 O
ATOM 25 O5' C B 142 41.811 6.478 17.301 1.00 17.54 O
TER
ATOM 2 P G A 140 43.876 17.260 21.819 1.00 17.36 P
ATOM 3 OP1 G A 140 44.662 16.917 23.025 1.00 16.42 O
ATOM 4 OP2 G A 140 44.549 17.389 20.507 1.00 18.29 O
ATOM 5 O5' G A 140 42.709 16.185 21.625 1.00 17.33 O
ATOM 6 C5' G A 140 41.871 15.849 22.719 1.00 17.08 C
ATOM 7 C4' G A 140 40.549 15.286 22.237 1.00 16.89 C
ATOM 8 O4' G A 140 39.884 16.238 21.366 1.00 16.37 O
ATOM 9 C3' G A 140 40.667 14.048 21.368 1.00 16.90 C
ATOM 10 O3' G A 140 40.924 12.891 22.155 1.00 16.85 O
ATOM 11 C2' G A 140 39.297 14.038 20.696 1.00 16.56 C
ATOM 12 O2' G A 140 38.261 13.568 21.536 1.00 17.02 O
ATOM 13 C1' G A 140 39.124 15.529 20.403 1.00 16.87 C
ATOM 14 N9 G A 140 39.579 15.880 19.056 1.00 17.19 N
ATOM 15 C8 G A 140 40.746 16.514 18.694 1.00 16.92 C
ATOM 16 N7 G A 140 40.870 16.682 17.406 1.00 17.02 N
ATOM 17 C5 G A 140 39.715 16.116 16.875 1.00 17.24 C
ATOM 18 C6 G A 140 39.283 15.988 15.528 1.00 17.53 C
ATOM 19 O6 G A 140 39.857 16.370 14.501 1.00 17.19 O
ATOM 20 N1 G A 140 38.047 15.344 15.429 1.00 16.87 N
ATOM 21 C2 G A 140 37.319 14.879 16.501 1.00 17.31 C
ATOM 22 N2 G A 140 36.150 14.285 16.225 1.00 17.00 N
ATOM 23 N3 G A 140 37.712 14.990 17.766 1.00 17.14 N
ATOM 24 C4 G A 140 38.913 15.614 17.879 1.00 17.28 C
ATOM 25 P U A 141 41.956 11.787 21.625 1.00 17.23 P
ATOM 26 OP1 U A 141 42.180 10.822 22.723 1.00 16.52 O
ATOM 27 OP2 U A 141 43.106 12.470 20.990 1.00 16.91 O
ATOM 28 O5' U A 141 41.138 11.089 20.444 1.00 16.79 O
TER
ATOM 1 O3' G B 140 40.924 12.891 22.155 1.00 16.85 O
ATOM 2 P U B 141 41.956 11.787 21.625 1.00 17.23 P
ATOM 3 OP1 U B 141 42.180 10.822 22.723 1.00 16.52 O
ATOM 4 OP2 U B 141 43.106 12.470 20.990 1.00 16.91 O
ATOM 5 O5' U B 141 41.138 11.089 20.444 1.00 16.79 O
ATOM 6 C5' U B 141 39.949 10.349 20.708 1.00 16.60 C
ATOM 7 C4' U B 141 39.272 10.004 19.398 1.00 16.38 C
ATOM 8 O4' U B 141 38.906 11.222 18.702 1.00 16.37 O
ATOM 9 C3' U B 141 40.148 9.284 18.381 1.00 16.36 C
ATOM 10 O3' U B 141 40.288 7.910 18.694 1.00 16.74 O
ATOM 11 C2' U B 141 39.348 9.535 17.106 1.00 16.36 C
ATOM 12 O2' U B 141 38.181 8.742 16.999 1.00 16.37 O
ATOM 13 C1' U B 141 38.975 11.001 17.300 1.00 16.01 C
ATOM 14 N1 U B 141 39.938 11.965 16.646 1.00 16.29 N
ATOM 15 C2 U B 141 39.828 12.212 15.282 1.00 16.20 C
ATOM 16 O2 U B 141 38.995 11.691 14.559 1.00 17.17 O
ATOM 17 N3 U B 141 40.742 13.109 14.779 1.00 16.11 N
ATOM 18 C4 U B 141 41.739 13.766 15.483 1.00 15.75 C
ATOM 19 O4 U B 141 42.482 14.540 14.892 1.00 15.63 O
ATOM 20 C5 U B 141 41.798 13.462 16.894 1.00 15.56 C
ATOM 21 C6 U B 141 40.912 12.597 17.409 1.00 15.67 C
ATOM 22 P C B 142 41.731 7.209 18.721 1.00 17.67 P
ATOM 23 OP1 C B 142 41.680 6.181 19.784 1.00 17.17 O
ATOM 24 OP2 C B 142 42.789 8.244 18.731 1.00 17.04 O
ATOM 25 O5' C B 142 41.811 6.478 17.301 1.00 17.54 O
TER
Atoms:
OP1: (44.662,16.917,23.025)
OP2: (44.549,17.389,20.507)
C3': (40.667,14.048,21.368)
C1': (39.124,15.529,20.403)
C5': (41.871,15.849,22.719)
O6: (39.857,16.370,14.501)
O4': (39.884,16.238,21.366)
C8: (40.746,16.514,18.694)
C2: (37.319,14.879,16.501)
C6: (39.283,15.988,15.528)
C5: (39.715,16.116,16.875)
C4: (38.913,15.614,17.879)
P: (43.876,17.260,21.819)
C4': (40.549,15.286,22.237)
C2': (39.297,14.038,20.696)
O2': (38.261,13.568,21.536)
N1: (38.047,15.344,15.429)
N2: (36.150,14.285,16.225)
N3: (37.712,14.990,17.766)
N7: (40.870,16.682,17.406)
N9: (39.579,15.880,19.056)
O5': (42.709,16.185,21.625)
O3': (40.924,12.891,22.155)
OP2: (44.549,17.389,20.507)
C3': (40.667,14.048,21.368)
C1': (39.124,15.529,20.403)
C5': (41.871,15.849,22.719)
O6: (39.857,16.370,14.501)
O4': (39.884,16.238,21.366)
C8: (40.746,16.514,18.694)
C2: (37.319,14.879,16.501)
C6: (39.283,15.988,15.528)
C5: (39.715,16.116,16.875)
C4: (38.913,15.614,17.879)
P: (43.876,17.260,21.819)
C4': (40.549,15.286,22.237)
C2': (39.297,14.038,20.696)
O2': (38.261,13.568,21.536)
N1: (38.047,15.344,15.429)
N2: (36.150,14.285,16.225)
N3: (37.712,14.990,17.766)
N7: (40.870,16.682,17.406)
N9: (39.579,15.880,19.056)
O5': (42.709,16.185,21.625)
O3': (40.924,12.891,22.155)
C4: (41.739,13.766,15.483)
N3: (40.742,13.109,14.779)
OP1: (42.180,10.822,22.723)
OP2: (43.106,12.470,20.990)
C2: (39.828,12.212,15.282)
C1': (38.975,11.001,17.300)
C3': (40.148,9.284,18.381)
O5': (41.138,11.089,20.444)
O4': (38.906,11.222,18.702)
C5': (39.949,10.349,20.708)
P: (41.956,11.787,21.625)
C4': (39.272,10.004,19.398)
C2': (39.348,9.535,17.106)
O2': (38.181,8.742,16.999)
N1: (39.938,11.965,16.646)
O4: (42.482,14.540,14.892)
O2: (38.995,11.691,14.559)
C6: (40.912,12.597,17.409)
C5: (41.798,13.462,16.894)
O3': (40.288,7.910,18.694)
N3: (40.742,13.109,14.779)
OP1: (42.180,10.822,22.723)
OP2: (43.106,12.470,20.990)
C2: (39.828,12.212,15.282)
C1': (38.975,11.001,17.300)
C3': (40.148,9.284,18.381)
O5': (41.138,11.089,20.444)
O4': (38.906,11.222,18.702)
C5': (39.949,10.349,20.708)
P: (41.956,11.787,21.625)
C4': (39.272,10.004,19.398)
C2': (39.348,9.535,17.106)
O2': (38.181,8.742,16.999)
N1: (39.938,11.965,16.646)
O4: (42.482,14.540,14.892)
O2: (38.995,11.691,14.559)
C6: (40.912,12.597,17.409)
C5: (41.798,13.462,16.894)
O3': (40.288,7.910,18.694)
Image (generated by PyMOL):