Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1311:A438
Extra
PDB:
ATOM 1 O3' G A1310 37.546 115.954 55.442 1.00 45.51 O
ATOM 2 P A A1311 38.813 116.594 54.690 1.00 45.69 P
ATOM 3 OP1 A A1311 38.208 117.544 53.736 1.00 45.63 O
ATOM 4 OP2 A A1311 39.734 115.550 54.176 1.00 45.68 O
ATOM 5 O5' A A1311 39.562 117.429 55.822 1.00 46.56 O
ATOM 6 C5' A A1311 39.809 116.905 57.153 1.00 47.38 C
ATOM 7 C4' A A1311 39.905 118.058 58.111 1.00 48.73 C
ATOM 8 O4' A A1311 40.932 118.957 57.618 1.00 48.42 O
ATOM 9 C3' A A1311 38.646 118.914 58.097 1.00 50.37 C
ATOM 10 O3' A A1311 37.586 118.479 58.933 1.00 50.45 O
ATOM 11 C2' A A1311 39.175 120.281 58.502 1.00 51.31 C
ATOM 12 O2' A A1311 39.418 120.443 59.891 1.00 52.85 O
ATOM 13 C1' A A1311 40.498 120.303 57.739 1.00 50.15 C
ATOM 14 N9 A A1311 40.398 120.903 56.398 1.00 48.87 N
ATOM 15 C8 A A1311 39.361 120.797 55.503 1.00 49.11 C
ATOM 16 N7 A A1311 39.537 121.483 54.400 1.00 48.93 N
ATOM 17 C5 A A1311 40.774 122.083 54.574 1.00 48.34 C
ATOM 18 C6 A A1311 41.528 122.952 53.759 1.00 48.05 C
ATOM 19 N6 A A1311 41.113 123.417 52.575 1.00 48.66 N
ATOM 20 N1 A A1311 42.733 123.339 54.211 1.00 47.11 N
ATOM 21 C2 A A1311 43.138 122.893 55.401 1.00 45.97 C
ATOM 22 N3 A A1311 42.520 122.094 56.263 1.00 47.11 N
ATOM 23 C4 A A1311 41.326 121.718 55.788 1.00 48.22 C
ATOM 24 P C A1312 37.871 117.488 60.157 1.00 52.77 P
ATOM 25 OP1 C A1312 38.668 118.269 61.107 1.00 54.04 O
ATOM 26 OP2 C A1312 38.356 116.152 59.704 1.00 52.59 O
ATOM 27 O5' C A1312 36.430 117.373 60.811 1.00 48.90 O
TER
ATOM 1 O3' A B 437 32.545 120.126 47.659 1.00 35.17 O
ATOM 2 P C B 438 33.747 121.100 47.222 1.00 34.90 P
ATOM 3 OP1 C B 438 33.140 122.371 46.828 1.00 34.38 O
ATOM 4 OP2 C B 438 34.701 120.450 46.309 1.00 33.48 O
ATOM 5 O5' C B 438 34.511 121.323 48.590 1.00 36.34 O
ATOM 6 C5' C B 438 35.237 120.240 49.198 1.00 36.94 C
ATOM 7 C4' C B 438 36.583 120.729 49.685 1.00 39.21 C
ATOM 8 O4' C B 438 37.462 121.092 48.584 1.00 39.38 O
ATOM 9 C3' C B 438 36.501 121.993 50.512 1.00 38.23 C
ATOM 10 O3' C B 438 36.127 121.692 51.833 1.00 37.28 O
ATOM 11 C2' C B 438 37.900 122.560 50.394 1.00 37.99 C
ATOM 12 O2' C B 438 38.803 121.858 51.212 1.00 37.41 O
ATOM 13 C1' C B 438 38.202 122.258 48.930 1.00 38.29 C
ATOM 14 N1 C B 438 37.789 123.357 48.036 1.00 40.40 N
ATOM 15 C2 C B 438 38.660 124.424 47.844 1.00 41.42 C
ATOM 16 O2 C B 438 39.733 124.449 48.465 1.00 42.60 O
ATOM 17 N3 C B 438 38.313 125.412 46.994 1.00 43.45 N
ATOM 18 C4 C B 438 37.138 125.372 46.356 1.00 43.57 C
ATOM 19 N4 C B 438 36.843 126.375 45.514 1.00 44.37 N
ATOM 20 C5 C B 438 36.218 124.309 46.550 1.00 43.40 C
ATOM 21 C6 C B 438 36.578 123.332 47.392 1.00 41.25 C
ATOM 22 P C B 439 35.148 122.691 52.606 1.00 37.78 P
ATOM 23 OP1 C B 439 34.814 122.059 53.886 1.00 36.80 O
ATOM 24 OP2 C B 439 34.053 123.084 51.671 1.00 39.54 O
ATOM 25 O5' C B 439 36.062 123.960 52.922 1.00 36.79 O
TER
ATOM 2 P A A1311 38.813 116.594 54.690 1.00 45.69 P
ATOM 3 OP1 A A1311 38.208 117.544 53.736 1.00 45.63 O
ATOM 4 OP2 A A1311 39.734 115.550 54.176 1.00 45.68 O
ATOM 5 O5' A A1311 39.562 117.429 55.822 1.00 46.56 O
ATOM 6 C5' A A1311 39.809 116.905 57.153 1.00 47.38 C
ATOM 7 C4' A A1311 39.905 118.058 58.111 1.00 48.73 C
ATOM 8 O4' A A1311 40.932 118.957 57.618 1.00 48.42 O
ATOM 9 C3' A A1311 38.646 118.914 58.097 1.00 50.37 C
ATOM 10 O3' A A1311 37.586 118.479 58.933 1.00 50.45 O
ATOM 11 C2' A A1311 39.175 120.281 58.502 1.00 51.31 C
ATOM 12 O2' A A1311 39.418 120.443 59.891 1.00 52.85 O
ATOM 13 C1' A A1311 40.498 120.303 57.739 1.00 50.15 C
ATOM 14 N9 A A1311 40.398 120.903 56.398 1.00 48.87 N
ATOM 15 C8 A A1311 39.361 120.797 55.503 1.00 49.11 C
ATOM 16 N7 A A1311 39.537 121.483 54.400 1.00 48.93 N
ATOM 17 C5 A A1311 40.774 122.083 54.574 1.00 48.34 C
ATOM 18 C6 A A1311 41.528 122.952 53.759 1.00 48.05 C
ATOM 19 N6 A A1311 41.113 123.417 52.575 1.00 48.66 N
ATOM 20 N1 A A1311 42.733 123.339 54.211 1.00 47.11 N
ATOM 21 C2 A A1311 43.138 122.893 55.401 1.00 45.97 C
ATOM 22 N3 A A1311 42.520 122.094 56.263 1.00 47.11 N
ATOM 23 C4 A A1311 41.326 121.718 55.788 1.00 48.22 C
ATOM 24 P C A1312 37.871 117.488 60.157 1.00 52.77 P
ATOM 25 OP1 C A1312 38.668 118.269 61.107 1.00 54.04 O
ATOM 26 OP2 C A1312 38.356 116.152 59.704 1.00 52.59 O
ATOM 27 O5' C A1312 36.430 117.373 60.811 1.00 48.90 O
TER
ATOM 1 O3' A B 437 32.545 120.126 47.659 1.00 35.17 O
ATOM 2 P C B 438 33.747 121.100 47.222 1.00 34.90 P
ATOM 3 OP1 C B 438 33.140 122.371 46.828 1.00 34.38 O
ATOM 4 OP2 C B 438 34.701 120.450 46.309 1.00 33.48 O
ATOM 5 O5' C B 438 34.511 121.323 48.590 1.00 36.34 O
ATOM 6 C5' C B 438 35.237 120.240 49.198 1.00 36.94 C
ATOM 7 C4' C B 438 36.583 120.729 49.685 1.00 39.21 C
ATOM 8 O4' C B 438 37.462 121.092 48.584 1.00 39.38 O
ATOM 9 C3' C B 438 36.501 121.993 50.512 1.00 38.23 C
ATOM 10 O3' C B 438 36.127 121.692 51.833 1.00 37.28 O
ATOM 11 C2' C B 438 37.900 122.560 50.394 1.00 37.99 C
ATOM 12 O2' C B 438 38.803 121.858 51.212 1.00 37.41 O
ATOM 13 C1' C B 438 38.202 122.258 48.930 1.00 38.29 C
ATOM 14 N1 C B 438 37.789 123.357 48.036 1.00 40.40 N
ATOM 15 C2 C B 438 38.660 124.424 47.844 1.00 41.42 C
ATOM 16 O2 C B 438 39.733 124.449 48.465 1.00 42.60 O
ATOM 17 N3 C B 438 38.313 125.412 46.994 1.00 43.45 N
ATOM 18 C4 C B 438 37.138 125.372 46.356 1.00 43.57 C
ATOM 19 N4 C B 438 36.843 126.375 45.514 1.00 44.37 N
ATOM 20 C5 C B 438 36.218 124.309 46.550 1.00 43.40 C
ATOM 21 C6 C B 438 36.578 123.332 47.392 1.00 41.25 C
ATOM 22 P C B 439 35.148 122.691 52.606 1.00 37.78 P
ATOM 23 OP1 C B 439 34.814 122.059 53.886 1.00 36.80 O
ATOM 24 OP2 C B 439 34.053 123.084 51.671 1.00 39.54 O
ATOM 25 O5' C B 439 36.062 123.960 52.922 1.00 36.79 O
TER
Atoms:
OP1: (38.208,117.544,53.736)
OP2: (39.734,115.550,54.176)
C3': (38.646,118.914,58.097)
C1': (40.498,120.303,57.739)
C5': (39.809,116.905,57.153)
O4': (40.932,118.957,57.618)
C8: (39.361,120.797,55.503)
O2': (39.418,120.443,59.891)
C6: (41.528,122.952,53.759)
C5: (40.774,122.083,54.574)
C4: (41.326,121.718,55.788)
P: (38.813,116.594,54.690)
C4': (39.905,118.058,58.111)
C2': (39.175,120.281,58.502)
C2: (43.138,122.893,55.401)
N1: (42.733,123.339,54.211)
N3: (42.520,122.094,56.263)
N6: (41.113,123.417,52.575)
N7: (39.537,121.483,54.400)
N9: (40.398,120.903,56.398)
O5': (39.562,117.429,55.822)
O3': (37.586,118.479,58.933)
OP2: (39.734,115.550,54.176)
C3': (38.646,118.914,58.097)
C1': (40.498,120.303,57.739)
C5': (39.809,116.905,57.153)
O4': (40.932,118.957,57.618)
C8: (39.361,120.797,55.503)
O2': (39.418,120.443,59.891)
C6: (41.528,122.952,53.759)
C5: (40.774,122.083,54.574)
C4: (41.326,121.718,55.788)
P: (38.813,116.594,54.690)
C4': (39.905,118.058,58.111)
C2': (39.175,120.281,58.502)
C2: (43.138,122.893,55.401)
N1: (42.733,123.339,54.211)
N3: (42.520,122.094,56.263)
N6: (41.113,123.417,52.575)
N7: (39.537,121.483,54.400)
N9: (40.398,120.903,56.398)
O5': (39.562,117.429,55.822)
O3': (37.586,118.479,58.933)
C2: (38.660,124.424,47.844)
OP1: (33.140,122.371,46.828)
OP2: (34.701,120.450,46.309)
C4: (37.138,125.372,46.356)
O5': (34.511,121.323,48.590)
C3': (36.501,121.993,50.512)
C1': (38.202,122.258,48.930)
O4': (37.462,121.092,48.584)
C5': (35.237,120.240,49.198)
P: (33.747,121.100,47.222)
O2: (39.733,124.449,48.465)
C4': (36.583,120.729,49.685)
C2': (37.900,122.560,50.394)
O2': (38.803,121.858,51.212)
N1: (37.789,123.357,48.036)
N3: (38.313,125.412,46.994)
N4: (36.843,126.375,45.514)
C6: (36.578,123.332,47.392)
C5: (36.218,124.309,46.550)
O3': (36.127,121.692,51.833)
OP1: (33.140,122.371,46.828)
OP2: (34.701,120.450,46.309)
C4: (37.138,125.372,46.356)
O5': (34.511,121.323,48.590)
C3': (36.501,121.993,50.512)
C1': (38.202,122.258,48.930)
O4': (37.462,121.092,48.584)
C5': (35.237,120.240,49.198)
P: (33.747,121.100,47.222)
O2: (39.733,124.449,48.465)
C4': (36.583,120.729,49.685)
C2': (37.900,122.560,50.394)
O2': (38.803,121.858,51.212)
N1: (37.789,123.357,48.036)
N3: (38.313,125.412,46.994)
N4: (36.843,126.375,45.514)
C6: (36.578,123.332,47.392)
C5: (36.218,124.309,46.550)
O3': (36.127,121.692,51.833)
Image (generated by PyMOL):