ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MXH:R41:R76

Extra

PDB:
ATOM 1 O3' A A 40 -10.737 -1.817 8.227 1.00 33.84 O
ATOM 2 P A A 41 -10.518 -0.560 7.283 1.00 35.95 P
ATOM 3 OP1 A A 41 -10.304 0.622 8.148 1.00 35.34 O
ATOM 4 OP2 A A 41 -11.596 -0.553 6.268 1.00 39.76 O
ATOM 5 O5' A A 41 -9.127 -0.869 6.566 1.00 36.17 O
ATOM 6 C5' A A 41 -8.901 -2.096 5.900 1.00 37.21 C
ATOM 7 C4' A A 41 -7.435 -2.233 5.513 1.00 36.15 C
ATOM 8 O4' A A 41 -7.064 -1.194 4.575 1.00 38.44 O
ATOM 9 C3' A A 41 -6.441 -2.125 6.655 1.00 37.52 C
ATOM 10 O3' A A 41 -5.349 -3.014 6.402 1.00 39.66 O
ATOM 11 C2' A A 41 -6.019 -0.652 6.631 1.00 36.97 C
ATOM 12 O2' A A 41 -4.671 -0.488 7.022 1.00 38.45 O
ATOM 13 C1' A A 41 -6.197 -0.244 5.166 1.00 35.34 C
ATOM 14 N9 A A 41 -6.794 1.078 4.939 1.00 34.94 N
ATOM 15 C8 A A 41 -8.096 1.328 4.596 1.00 35.72 C
ATOM 16 N7 A A 41 -8.379 2.602 4.441 1.00 35.14 N
ATOM 17 C5 A A 41 -7.183 3.238 4.695 1.00 31.49 C
ATOM 18 C6 A A 41 -6.821 4.603 4.684 1.00 34.49 C
ATOM 19 N6 A A 41 -7.684 5.587 4.409 1.00 30.79 N
ATOM 20 N1 A A 41 -5.536 4.918 4.974 1.00 33.00 N
ATOM 21 C2 A A 41 -4.684 3.924 5.260 1.00 28.53 C
ATOM 22 N3 A A 41 -4.914 2.606 5.293 1.00 31.05 N
ATOM 23 C4 A A 41 -6.192 2.322 4.999 1.00 30.95 C
ATOM 24 P G A 42 -5.153 -4.370 7.245 1.00 37.23 P
ATOM 25 OP1 G A 42 -5.194 -4.010 8.677 1.00 37.78 O
ATOM 26 OP2 G A 42 -3.982 -5.083 6.699 1.00 36.64 O
ATOM 27 O5' G A 42 -6.469 -5.199 6.911 1.00 36.78 O
TER

ATOM 1 O3' A B 75 -10.341 -1.852 0.297 1.00 46.15 O
ATOM 2 P G B 76 -9.530 -1.307 1.557 1.00 47.53 P
ATOM 3 OP1 G B 76 -8.474 -2.286 1.884 1.00 43.71 O
ATOM 4 OP2 G B 76 -10.527 -0.916 2.582 1.00 49.08 O
ATOM 5 O5' G B 76 -8.827 0.017 0.995 1.00 47.09 O
ATOM 6 C5' G B 76 -9.512 1.264 0.955 1.00 46.26 C
ATOM 7 C4' G B 76 -8.644 2.356 0.334 1.00 47.02 C
ATOM 8 O4' G B 76 -7.495 2.640 1.184 1.00 45.55 O
ATOM 9 C3' G B 76 -8.064 2.040 -1.045 1.00 47.78 C
ATOM 10 O3' G B 76 -7.994 3.226 -1.803 1.00 50.99 O
ATOM 11 C2' G B 76 -6.657 1.572 -0.710 1.00 46.76 C
ATOM 12 O2' G B 76 -5.777 1.708 -1.810 1.00 49.56 O
ATOM 13 C1' G B 76 -6.324 2.575 0.394 1.00 45.27 C
ATOM 14 N9 G B 76 -5.197 2.207 1.246 1.00 42.26 N
ATOM 15 C8 G B 76 -4.846 0.942 1.654 1.00 41.52 C
ATOM 16 N7 G B 76 -3.785 0.919 2.412 1.00 41.96 N
ATOM 17 C5 G B 76 -3.407 2.252 2.514 1.00 40.21 C
ATOM 18 C6 G B 76 -2.324 2.840 3.211 1.00 40.16 C
ATOM 19 O6 G B 76 -1.466 2.273 3.904 1.00 39.17 O
ATOM 20 N1 G B 76 -2.296 4.230 3.061 1.00 40.74 N
ATOM 21 C2 G B 76 -3.208 4.957 2.323 1.00 41.81 C
ATOM 22 N2 G B 76 -3.027 6.284 2.285 1.00 41.92 N
ATOM 23 N3 G B 76 -4.225 4.414 1.666 1.00 41.59 N
ATOM 24 C4 G B 76 -4.267 3.061 1.805 1.00 41.26 C
ATOM 25 P C B 77 -8.645 3.361 -3.255 1.00 54.43 P
ATOM 26 OP1 C B 77 -8.969 2.028 -3.796 1.00 54.07 O
ATOM 27 OP2 C B 77 -7.793 4.284 -4.037 1.00 57.73 O
ATOM 28 O5' C B 77 -10.004 4.113 -2.910 1.00 57.65 O
TER

Atoms:
OP1: (-10.304,0.622,8.148)
OP2: (-11.596,-0.553,6.268)
C3': (-6.441,-2.125,6.655)
C1': (-6.197,-0.244,5.166)
C5': (-8.901,-2.096,5.900)
O4': (-7.064,-1.194,4.575)
C8: (-8.096,1.328,4.596)
O2': (-4.671,-0.488,7.022)
C6: (-6.821,4.603,4.684)
C5: (-7.183,3.238,4.695)
C4: (-6.192,2.322,4.999)
P: (-10.518,-0.560,7.283)
C4': (-7.435,-2.233,5.513)
C2': (-6.019,-0.652,6.631)
C2: (-4.684,3.924,5.260)
N1: (-5.536,4.918,4.974)
N3: (-4.914,2.606,5.293)
N6: (-7.684,5.587,4.409)
N7: (-8.379,2.602,4.441)
N9: (-6.794,1.078,4.939)
O5': (-9.127,-0.869,6.566)
O3': (-5.349,-3.014,6.402)
OP1: (-8.474,-2.286,1.884)
OP2: (-10.527,-0.916,2.582)
C3': (-8.064,2.040,-1.045)
C1': (-6.324,2.575,0.394)
C5': (-9.512,1.264,0.955)
O6: (-1.466,2.273,3.904)
O4': (-7.495,2.640,1.184)
C8: (-4.846,0.942,1.654)
C2: (-3.208,4.957,2.323)
C6: (-2.324,2.840,3.211)
C5: (-3.407,2.252,2.514)
C4: (-4.267,3.061,1.805)
P: (-9.530,-1.307,1.557)
C4': (-8.644,2.356,0.334)
C2': (-6.657,1.572,-0.710)
O2': (-5.777,1.708,-1.810)
N1: (-2.296,4.230,3.061)
N2: (-3.027,6.284,2.285)
N3: (-4.225,4.414,1.666)
N7: (-3.785,0.919,2.412)
N9: (-5.197,2.207,1.246)
O5': (-8.827,0.017,0.995)
O3': (-7.994,3.226,-1.803)
Image (generated by PyMOL):
PyMOL image
show in jmol