Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01311:0438
Extra
PDB:
ATOM 1 O3' G A1310 37.252 116.018 55.089 1.00 39.12 O
ATOM 2 P A A1311 38.463 116.722 54.307 1.00 37.60 P
ATOM 3 OP1 A A1311 37.830 117.650 53.334 1.00 33.65 O
ATOM 4 OP2 A A1311 39.406 115.687 53.815 1.00 35.31 O
ATOM 5 O5' A A1311 39.183 117.576 55.452 1.00 38.34 O
ATOM 6 C5' A A1311 39.437 117.027 56.771 1.00 41.46 C
ATOM 7 C4' A A1311 39.665 118.148 57.760 1.00 44.55 C
ATOM 8 O4' A A1311 40.701 118.997 57.195 1.00 49.70 O
ATOM 9 C3' A A1311 38.472 119.081 57.920 1.00 47.20 C
ATOM 10 O3' A A1311 37.525 118.809 58.952 1.00 47.54 O
ATOM 11 C2' A A1311 39.121 120.415 58.256 1.00 50.20 C
ATOM 12 O2' A A1311 39.485 120.540 59.619 1.00 54.69 O
ATOM 13 C1' A A1311 40.370 120.367 57.384 1.00 49.67 C
ATOM 14 N9 A A1311 40.183 120.993 56.072 1.00 46.16 N
ATOM 15 C8 A A1311 39.116 120.887 55.212 1.00 45.93 C
ATOM 16 N7 A A1311 39.264 121.568 54.100 1.00 46.27 N
ATOM 17 C5 A A1311 40.508 122.168 54.242 1.00 44.43 C
ATOM 18 C6 A A1311 41.249 123.016 53.411 1.00 42.90 C
ATOM 19 N6 A A1311 40.822 123.458 52.228 1.00 42.86 N
ATOM 20 N1 A A1311 42.463 123.409 53.843 1.00 43.01 N
ATOM 21 C2 A A1311 42.888 122.988 55.034 1.00 40.59 C
ATOM 22 N3 A A1311 42.283 122.208 55.909 1.00 41.79 N
ATOM 23 C4 A A1311 41.083 121.822 55.449 1.00 43.90 C
ATOM 24 P C A1312 37.746 117.626 60.033 1.00 50.21 P
ATOM 25 OP1 C A1312 38.602 118.126 61.158 1.00 41.95 O
ATOM 26 OP2 C A1312 38.074 116.328 59.374 1.00 48.70 O
ATOM 27 O5' C A1312 36.267 117.508 60.611 1.00 44.21 O
TER
ATOM 1 O3' A B 437 32.242 120.298 47.336 1.00 28.72 O
ATOM 2 P C B 438 33.469 121.259 46.952 1.00 28.89 P
ATOM 3 OP1 C B 438 32.947 122.604 46.651 1.00 29.97 O
ATOM 4 OP2 C B 438 34.336 120.570 45.962 1.00 23.23 O
ATOM 5 O5' C B 438 34.247 121.425 48.329 1.00 31.42 O
ATOM 6 C5' C B 438 34.975 120.340 48.908 1.00 32.11 C
ATOM 7 C4' C B 438 36.317 120.831 49.376 1.00 32.98 C
ATOM 8 O4' C B 438 37.139 121.200 48.233 1.00 33.06 O
ATOM 9 C3' C B 438 36.270 122.096 50.217 1.00 31.93 C
ATOM 10 O3' C B 438 35.935 121.809 51.565 1.00 29.63 O
ATOM 11 C2' C B 438 37.687 122.618 50.054 1.00 32.34 C
ATOM 12 O2' C B 438 38.599 121.860 50.814 1.00 33.11 O
ATOM 13 C1' C B 438 37.936 122.325 48.573 1.00 34.16 C
ATOM 14 N1 C B 438 37.557 123.458 47.705 1.00 35.93 N
ATOM 15 C2 C B 438 38.439 124.540 47.584 1.00 36.16 C
ATOM 16 O2 C B 438 39.514 124.514 48.199 1.00 34.76 O
ATOM 17 N3 C B 438 38.096 125.586 46.797 1.00 37.48 N
ATOM 18 C4 C B 438 36.935 125.577 46.139 1.00 37.20 C
ATOM 19 N4 C B 438 36.652 126.623 45.365 1.00 36.55 N
ATOM 20 C5 C B 438 36.019 124.493 46.243 1.00 37.90 C
ATOM 21 C6 C B 438 36.366 123.464 47.030 1.00 37.63 C
ATOM 22 P C B 439 34.918 122.768 52.358 1.00 31.11 P
ATOM 23 OP1 C B 439 34.584 122.085 53.638 1.00 33.82 O
ATOM 24 OP2 C B 439 33.827 123.210 51.466 1.00 34.32 O
ATOM 25 O5' C B 439 35.802 124.041 52.704 1.00 32.94 O
TER
ATOM 2 P A A1311 38.463 116.722 54.307 1.00 37.60 P
ATOM 3 OP1 A A1311 37.830 117.650 53.334 1.00 33.65 O
ATOM 4 OP2 A A1311 39.406 115.687 53.815 1.00 35.31 O
ATOM 5 O5' A A1311 39.183 117.576 55.452 1.00 38.34 O
ATOM 6 C5' A A1311 39.437 117.027 56.771 1.00 41.46 C
ATOM 7 C4' A A1311 39.665 118.148 57.760 1.00 44.55 C
ATOM 8 O4' A A1311 40.701 118.997 57.195 1.00 49.70 O
ATOM 9 C3' A A1311 38.472 119.081 57.920 1.00 47.20 C
ATOM 10 O3' A A1311 37.525 118.809 58.952 1.00 47.54 O
ATOM 11 C2' A A1311 39.121 120.415 58.256 1.00 50.20 C
ATOM 12 O2' A A1311 39.485 120.540 59.619 1.00 54.69 O
ATOM 13 C1' A A1311 40.370 120.367 57.384 1.00 49.67 C
ATOM 14 N9 A A1311 40.183 120.993 56.072 1.00 46.16 N
ATOM 15 C8 A A1311 39.116 120.887 55.212 1.00 45.93 C
ATOM 16 N7 A A1311 39.264 121.568 54.100 1.00 46.27 N
ATOM 17 C5 A A1311 40.508 122.168 54.242 1.00 44.43 C
ATOM 18 C6 A A1311 41.249 123.016 53.411 1.00 42.90 C
ATOM 19 N6 A A1311 40.822 123.458 52.228 1.00 42.86 N
ATOM 20 N1 A A1311 42.463 123.409 53.843 1.00 43.01 N
ATOM 21 C2 A A1311 42.888 122.988 55.034 1.00 40.59 C
ATOM 22 N3 A A1311 42.283 122.208 55.909 1.00 41.79 N
ATOM 23 C4 A A1311 41.083 121.822 55.449 1.00 43.90 C
ATOM 24 P C A1312 37.746 117.626 60.033 1.00 50.21 P
ATOM 25 OP1 C A1312 38.602 118.126 61.158 1.00 41.95 O
ATOM 26 OP2 C A1312 38.074 116.328 59.374 1.00 48.70 O
ATOM 27 O5' C A1312 36.267 117.508 60.611 1.00 44.21 O
TER
ATOM 1 O3' A B 437 32.242 120.298 47.336 1.00 28.72 O
ATOM 2 P C B 438 33.469 121.259 46.952 1.00 28.89 P
ATOM 3 OP1 C B 438 32.947 122.604 46.651 1.00 29.97 O
ATOM 4 OP2 C B 438 34.336 120.570 45.962 1.00 23.23 O
ATOM 5 O5' C B 438 34.247 121.425 48.329 1.00 31.42 O
ATOM 6 C5' C B 438 34.975 120.340 48.908 1.00 32.11 C
ATOM 7 C4' C B 438 36.317 120.831 49.376 1.00 32.98 C
ATOM 8 O4' C B 438 37.139 121.200 48.233 1.00 33.06 O
ATOM 9 C3' C B 438 36.270 122.096 50.217 1.00 31.93 C
ATOM 10 O3' C B 438 35.935 121.809 51.565 1.00 29.63 O
ATOM 11 C2' C B 438 37.687 122.618 50.054 1.00 32.34 C
ATOM 12 O2' C B 438 38.599 121.860 50.814 1.00 33.11 O
ATOM 13 C1' C B 438 37.936 122.325 48.573 1.00 34.16 C
ATOM 14 N1 C B 438 37.557 123.458 47.705 1.00 35.93 N
ATOM 15 C2 C B 438 38.439 124.540 47.584 1.00 36.16 C
ATOM 16 O2 C B 438 39.514 124.514 48.199 1.00 34.76 O
ATOM 17 N3 C B 438 38.096 125.586 46.797 1.00 37.48 N
ATOM 18 C4 C B 438 36.935 125.577 46.139 1.00 37.20 C
ATOM 19 N4 C B 438 36.652 126.623 45.365 1.00 36.55 N
ATOM 20 C5 C B 438 36.019 124.493 46.243 1.00 37.90 C
ATOM 21 C6 C B 438 36.366 123.464 47.030 1.00 37.63 C
ATOM 22 P C B 439 34.918 122.768 52.358 1.00 31.11 P
ATOM 23 OP1 C B 439 34.584 122.085 53.638 1.00 33.82 O
ATOM 24 OP2 C B 439 33.827 123.210 51.466 1.00 34.32 O
ATOM 25 O5' C B 439 35.802 124.041 52.704 1.00 32.94 O
TER
Atoms:
OP1: (37.830,117.650,53.334)
OP2: (39.406,115.687,53.815)
C3': (38.472,119.081,57.920)
C1': (40.370,120.367,57.384)
C5': (39.437,117.027,56.771)
O4': (40.701,118.997,57.195)
C8: (39.116,120.887,55.212)
O2': (39.485,120.540,59.619)
C6: (41.249,123.016,53.411)
C5: (40.508,122.168,54.242)
C4: (41.083,121.822,55.449)
P: (38.463,116.722,54.307)
C4': (39.665,118.148,57.760)
C2': (39.121,120.415,58.256)
C2: (42.888,122.988,55.034)
N1: (42.463,123.409,53.843)
N3: (42.283,122.208,55.909)
N6: (40.822,123.458,52.228)
N7: (39.264,121.568,54.100)
N9: (40.183,120.993,56.072)
O5': (39.183,117.576,55.452)
O3': (37.525,118.809,58.952)
OP2: (39.406,115.687,53.815)
C3': (38.472,119.081,57.920)
C1': (40.370,120.367,57.384)
C5': (39.437,117.027,56.771)
O4': (40.701,118.997,57.195)
C8: (39.116,120.887,55.212)
O2': (39.485,120.540,59.619)
C6: (41.249,123.016,53.411)
C5: (40.508,122.168,54.242)
C4: (41.083,121.822,55.449)
P: (38.463,116.722,54.307)
C4': (39.665,118.148,57.760)
C2': (39.121,120.415,58.256)
C2: (42.888,122.988,55.034)
N1: (42.463,123.409,53.843)
N3: (42.283,122.208,55.909)
N6: (40.822,123.458,52.228)
N7: (39.264,121.568,54.100)
N9: (40.183,120.993,56.072)
O5': (39.183,117.576,55.452)
O3': (37.525,118.809,58.952)
C2: (38.439,124.540,47.584)
OP1: (32.947,122.604,46.651)
OP2: (34.336,120.570,45.962)
C4: (36.935,125.577,46.139)
O5': (34.247,121.425,48.329)
C3': (36.270,122.096,50.217)
C1': (37.936,122.325,48.573)
O4': (37.139,121.200,48.233)
C5': (34.975,120.340,48.908)
P: (33.469,121.259,46.952)
O2: (39.514,124.514,48.199)
C4': (36.317,120.831,49.376)
C2': (37.687,122.618,50.054)
O2': (38.599,121.860,50.814)
N1: (37.557,123.458,47.705)
N3: (38.096,125.586,46.797)
N4: (36.652,126.623,45.365)
C6: (36.366,123.464,47.030)
C5: (36.019,124.493,46.243)
O3': (35.935,121.809,51.565)
OP1: (32.947,122.604,46.651)
OP2: (34.336,120.570,45.962)
C4: (36.935,125.577,46.139)
O5': (34.247,121.425,48.329)
C3': (36.270,122.096,50.217)
C1': (37.936,122.325,48.573)
O4': (37.139,121.200,48.233)
C5': (34.975,120.340,48.908)
P: (33.469,121.259,46.952)
O2: (39.514,124.514,48.199)
C4': (36.317,120.831,49.376)
C2': (37.687,122.618,50.054)
O2': (38.599,121.860,50.814)
N1: (37.557,123.458,47.705)
N3: (38.096,125.586,46.797)
N4: (36.652,126.623,45.365)
C6: (36.366,123.464,47.030)
C5: (36.019,124.493,46.243)
O3': (35.935,121.809,51.565)
Image (generated by PyMOL):