Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01311:0438
Extra
PDB:
ATOM 1 O3' G A1310 37.337 115.950 55.068 1.00 38.94 O
ATOM 2 P A A1311 38.550 116.675 54.303 1.00 39.55 P
ATOM 3 OP1 A A1311 37.932 117.670 53.383 1.00 37.74 O
ATOM 4 OP2 A A1311 39.478 115.655 53.753 1.00 39.08 O
ATOM 5 O5' A A1311 39.308 117.463 55.463 1.00 38.31 O
ATOM 6 C5' A A1311 39.546 116.871 56.752 1.00 40.15 C
ATOM 7 C4' A A1311 39.777 117.958 57.770 1.00 43.95 C
ATOM 8 O4' A A1311 40.861 118.791 57.275 1.00 48.08 O
ATOM 9 C3' A A1311 38.612 118.928 57.916 1.00 46.64 C
ATOM 10 O3' A A1311 37.603 118.606 58.868 1.00 48.09 O
ATOM 11 C2' A A1311 39.312 120.196 58.377 1.00 48.71 C
ATOM 12 O2' A A1311 39.680 120.144 59.745 1.00 50.70 O
ATOM 13 C1' A A1311 40.567 120.162 57.510 1.00 47.71 C
ATOM 14 N9 A A1311 40.380 120.826 56.215 1.00 45.34 N
ATOM 15 C8 A A1311 39.294 120.769 55.370 1.00 44.17 C
ATOM 16 N7 A A1311 39.443 121.464 54.269 1.00 43.23 N
ATOM 17 C5 A A1311 40.707 122.023 54.397 1.00 44.02 C
ATOM 18 C6 A A1311 41.461 122.856 53.559 1.00 43.48 C
ATOM 19 N6 A A1311 41.035 123.309 52.376 1.00 43.97 N
ATOM 20 N1 A A1311 42.691 123.215 53.980 1.00 43.10 N
ATOM 21 C2 A A1311 43.122 122.770 55.161 1.00 41.79 C
ATOM 22 N3 A A1311 42.512 121.990 56.037 1.00 43.49 N
ATOM 23 C4 A A1311 41.293 121.642 55.591 1.00 44.81 C
ATOM 24 P C A1312 37.762 117.354 59.873 1.00 50.39 P
ATOM 25 OP1 C A1312 38.747 117.720 60.941 1.00 45.28 O
ATOM 26 OP2 C A1312 37.923 116.074 59.120 1.00 48.90 O
ATOM 27 O5' C A1312 36.322 117.320 60.548 1.00 46.10 O
TER
ATOM 1 O3' A B 437 32.392 120.158 47.368 1.00 32.35 O
ATOM 2 P C B 438 33.617 121.108 46.956 1.00 33.11 P
ATOM 3 OP1 C B 438 33.113 122.443 46.591 1.00 31.75 O
ATOM 4 OP2 C B 438 34.500 120.373 46.014 1.00 30.40 O
ATOM 5 O5' C B 438 34.391 121.302 48.327 1.00 35.42 O
ATOM 6 C5' C B 438 35.107 120.218 48.927 1.00 37.07 C
ATOM 7 C4' C B 438 36.424 120.712 49.461 1.00 37.20 C
ATOM 8 O4' C B 438 37.308 121.062 48.363 1.00 36.93 O
ATOM 9 C3' C B 438 36.332 121.980 50.287 1.00 36.69 C
ATOM 10 O3' C B 438 35.941 121.677 51.618 1.00 35.48 O
ATOM 11 C2' C B 438 37.751 122.512 50.183 1.00 37.84 C
ATOM 12 O2' C B 438 38.638 121.783 51.006 1.00 39.34 O
ATOM 13 C1' C B 438 38.078 122.193 48.721 1.00 37.25 C
ATOM 14 N1 C B 438 37.741 123.291 47.799 1.00 38.98 N
ATOM 15 C2 C B 438 38.621 124.368 47.686 1.00 39.74 C
ATOM 16 O2 C B 438 39.669 124.360 48.348 1.00 39.42 O
ATOM 17 N3 C B 438 38.309 125.392 46.857 1.00 40.55 N
ATOM 18 C4 C B 438 37.174 125.365 46.159 1.00 39.67 C
ATOM 19 N4 C B 438 36.902 126.401 45.374 1.00 41.16 N
ATOM 20 C5 C B 438 36.267 124.276 46.242 1.00 40.00 C
ATOM 21 C6 C B 438 36.586 123.269 47.067 1.00 40.31 C
ATOM 22 P C B 439 34.983 122.683 52.416 1.00 36.43 P
ATOM 23 OP1 C B 439 34.666 122.039 53.719 1.00 36.56 O
ATOM 24 OP2 C B 439 33.880 123.117 51.532 1.00 39.06 O
ATOM 25 O5' C B 439 35.922 123.940 52.684 1.00 37.31 O
TER
ATOM 2 P A A1311 38.550 116.675 54.303 1.00 39.55 P
ATOM 3 OP1 A A1311 37.932 117.670 53.383 1.00 37.74 O
ATOM 4 OP2 A A1311 39.478 115.655 53.753 1.00 39.08 O
ATOM 5 O5' A A1311 39.308 117.463 55.463 1.00 38.31 O
ATOM 6 C5' A A1311 39.546 116.871 56.752 1.00 40.15 C
ATOM 7 C4' A A1311 39.777 117.958 57.770 1.00 43.95 C
ATOM 8 O4' A A1311 40.861 118.791 57.275 1.00 48.08 O
ATOM 9 C3' A A1311 38.612 118.928 57.916 1.00 46.64 C
ATOM 10 O3' A A1311 37.603 118.606 58.868 1.00 48.09 O
ATOM 11 C2' A A1311 39.312 120.196 58.377 1.00 48.71 C
ATOM 12 O2' A A1311 39.680 120.144 59.745 1.00 50.70 O
ATOM 13 C1' A A1311 40.567 120.162 57.510 1.00 47.71 C
ATOM 14 N9 A A1311 40.380 120.826 56.215 1.00 45.34 N
ATOM 15 C8 A A1311 39.294 120.769 55.370 1.00 44.17 C
ATOM 16 N7 A A1311 39.443 121.464 54.269 1.00 43.23 N
ATOM 17 C5 A A1311 40.707 122.023 54.397 1.00 44.02 C
ATOM 18 C6 A A1311 41.461 122.856 53.559 1.00 43.48 C
ATOM 19 N6 A A1311 41.035 123.309 52.376 1.00 43.97 N
ATOM 20 N1 A A1311 42.691 123.215 53.980 1.00 43.10 N
ATOM 21 C2 A A1311 43.122 122.770 55.161 1.00 41.79 C
ATOM 22 N3 A A1311 42.512 121.990 56.037 1.00 43.49 N
ATOM 23 C4 A A1311 41.293 121.642 55.591 1.00 44.81 C
ATOM 24 P C A1312 37.762 117.354 59.873 1.00 50.39 P
ATOM 25 OP1 C A1312 38.747 117.720 60.941 1.00 45.28 O
ATOM 26 OP2 C A1312 37.923 116.074 59.120 1.00 48.90 O
ATOM 27 O5' C A1312 36.322 117.320 60.548 1.00 46.10 O
TER
ATOM 1 O3' A B 437 32.392 120.158 47.368 1.00 32.35 O
ATOM 2 P C B 438 33.617 121.108 46.956 1.00 33.11 P
ATOM 3 OP1 C B 438 33.113 122.443 46.591 1.00 31.75 O
ATOM 4 OP2 C B 438 34.500 120.373 46.014 1.00 30.40 O
ATOM 5 O5' C B 438 34.391 121.302 48.327 1.00 35.42 O
ATOM 6 C5' C B 438 35.107 120.218 48.927 1.00 37.07 C
ATOM 7 C4' C B 438 36.424 120.712 49.461 1.00 37.20 C
ATOM 8 O4' C B 438 37.308 121.062 48.363 1.00 36.93 O
ATOM 9 C3' C B 438 36.332 121.980 50.287 1.00 36.69 C
ATOM 10 O3' C B 438 35.941 121.677 51.618 1.00 35.48 O
ATOM 11 C2' C B 438 37.751 122.512 50.183 1.00 37.84 C
ATOM 12 O2' C B 438 38.638 121.783 51.006 1.00 39.34 O
ATOM 13 C1' C B 438 38.078 122.193 48.721 1.00 37.25 C
ATOM 14 N1 C B 438 37.741 123.291 47.799 1.00 38.98 N
ATOM 15 C2 C B 438 38.621 124.368 47.686 1.00 39.74 C
ATOM 16 O2 C B 438 39.669 124.360 48.348 1.00 39.42 O
ATOM 17 N3 C B 438 38.309 125.392 46.857 1.00 40.55 N
ATOM 18 C4 C B 438 37.174 125.365 46.159 1.00 39.67 C
ATOM 19 N4 C B 438 36.902 126.401 45.374 1.00 41.16 N
ATOM 20 C5 C B 438 36.267 124.276 46.242 1.00 40.00 C
ATOM 21 C6 C B 438 36.586 123.269 47.067 1.00 40.31 C
ATOM 22 P C B 439 34.983 122.683 52.416 1.00 36.43 P
ATOM 23 OP1 C B 439 34.666 122.039 53.719 1.00 36.56 O
ATOM 24 OP2 C B 439 33.880 123.117 51.532 1.00 39.06 O
ATOM 25 O5' C B 439 35.922 123.940 52.684 1.00 37.31 O
TER
Atoms:
OP1: (37.932,117.670,53.383)
OP2: (39.478,115.655,53.753)
C3': (38.612,118.928,57.916)
C1': (40.567,120.162,57.510)
C5': (39.546,116.871,56.752)
O4': (40.861,118.791,57.275)
C8: (39.294,120.769,55.370)
O2': (39.680,120.144,59.745)
C6: (41.461,122.856,53.559)
C5: (40.707,122.023,54.397)
C4: (41.293,121.642,55.591)
P: (38.550,116.675,54.303)
C4': (39.777,117.958,57.770)
C2': (39.312,120.196,58.377)
C2: (43.122,122.770,55.161)
N1: (42.691,123.215,53.980)
N3: (42.512,121.990,56.037)
N6: (41.035,123.309,52.376)
N7: (39.443,121.464,54.269)
N9: (40.380,120.826,56.215)
O5': (39.308,117.463,55.463)
O3': (37.603,118.606,58.868)
OP2: (39.478,115.655,53.753)
C3': (38.612,118.928,57.916)
C1': (40.567,120.162,57.510)
C5': (39.546,116.871,56.752)
O4': (40.861,118.791,57.275)
C8: (39.294,120.769,55.370)
O2': (39.680,120.144,59.745)
C6: (41.461,122.856,53.559)
C5: (40.707,122.023,54.397)
C4: (41.293,121.642,55.591)
P: (38.550,116.675,54.303)
C4': (39.777,117.958,57.770)
C2': (39.312,120.196,58.377)
C2: (43.122,122.770,55.161)
N1: (42.691,123.215,53.980)
N3: (42.512,121.990,56.037)
N6: (41.035,123.309,52.376)
N7: (39.443,121.464,54.269)
N9: (40.380,120.826,56.215)
O5': (39.308,117.463,55.463)
O3': (37.603,118.606,58.868)
C2: (38.621,124.368,47.686)
OP1: (33.113,122.443,46.591)
OP2: (34.500,120.373,46.014)
C4: (37.174,125.365,46.159)
O5': (34.391,121.302,48.327)
C3': (36.332,121.980,50.287)
C1': (38.078,122.193,48.721)
O4': (37.308,121.062,48.363)
C5': (35.107,120.218,48.927)
P: (33.617,121.108,46.956)
O2: (39.669,124.360,48.348)
C4': (36.424,120.712,49.461)
C2': (37.751,122.512,50.183)
O2': (38.638,121.783,51.006)
N1: (37.741,123.291,47.799)
N3: (38.309,125.392,46.857)
N4: (36.902,126.401,45.374)
C6: (36.586,123.269,47.067)
C5: (36.267,124.276,46.242)
O3': (35.941,121.677,51.618)
OP1: (33.113,122.443,46.591)
OP2: (34.500,120.373,46.014)
C4: (37.174,125.365,46.159)
O5': (34.391,121.302,48.327)
C3': (36.332,121.980,50.287)
C1': (38.078,122.193,48.721)
O4': (37.308,121.062,48.363)
C5': (35.107,120.218,48.927)
P: (33.617,121.108,46.956)
O2: (39.669,124.360,48.348)
C4': (36.424,120.712,49.461)
C2': (37.751,122.512,50.183)
O2': (38.638,121.783,51.006)
N1: (37.741,123.291,47.799)
N3: (38.309,125.392,46.857)
N4: (36.902,126.401,45.374)
C6: (36.586,123.269,47.067)
C5: (36.267,124.276,46.242)
O3': (35.941,121.677,51.618)
Image (generated by PyMOL):