Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02418:02393
Extra
PDB:
ATOM 1 O3' A A2417 53.719 122.084 139.710 1.00 43.27 O
ATOM 2 P A A2418 53.757 122.009 138.101 1.00 43.39 P
ATOM 3 OP1 A A2418 52.547 122.701 137.594 1.00 43.75 O
ATOM 4 OP2 A A2418 54.023 120.605 137.705 1.00 41.72 O
ATOM 5 O5' A A2418 55.013 122.894 137.694 1.00 40.62 O
ATOM 6 C5' A A2418 55.151 124.234 138.192 1.00 41.17 C
ATOM 7 C4' A A2418 55.687 125.146 137.115 1.00 41.30 C
ATOM 8 O4' A A2418 57.028 124.717 136.764 1.00 40.14 O
ATOM 9 C3' A A2418 54.895 125.176 135.814 1.00 41.64 C
ATOM 10 O3' A A2418 54.930 126.485 135.239 1.00 42.63 O
ATOM 11 C2' A A2418 55.624 124.151 134.952 1.00 40.21 C
ATOM 12 O2' A A2418 55.481 124.420 133.572 1.00 41.90 O
ATOM 13 C1' A A2418 57.073 124.331 135.406 1.00 38.22 C
ATOM 14 N9 A A2418 57.897 123.123 135.333 1.00 34.64 N
ATOM 15 C8 A A2418 57.505 121.807 135.254 1.00 33.86 C
ATOM 16 N7 A A2418 58.503 120.959 135.237 1.00 31.54 N
ATOM 17 C5 A A2418 59.627 121.767 135.297 1.00 33.23 C
ATOM 18 C6 A A2418 60.999 121.476 135.295 1.00 32.98 C
ATOM 19 N6 A A2418 61.489 120.243 135.211 1.00 34.66 N
ATOM 20 N1 A A2418 61.863 122.510 135.369 1.00 32.05 N
ATOM 21 C2 A A2418 61.369 123.753 135.420 1.00 33.29 C
ATOM 22 N3 A A2418 60.101 124.158 135.415 1.00 33.93 N
ATOM 23 C4 A A2418 59.269 123.102 135.354 1.00 34.58 C
ATOM 24 P G A2419 53.544 127.232 134.883 1.00 44.43 P
ATOM 25 OP1 G A2419 52.445 126.570 135.639 1.00 44.18 O
ATOM 26 OP2 G A2419 53.435 127.376 133.408 1.00 45.97 O
ATOM 27 O5' G A2419 53.717 128.686 135.496 1.00 42.35 O
TER
ATOM 1 O3' C B2392 54.583 118.670 129.911 1.00 32.03 O
ATOM 2 P C B2393 54.409 118.605 131.507 1.00 31.58 P
ATOM 3 OP1 C B2393 53.354 117.609 131.810 1.00 33.81 O
ATOM 4 OP2 C B2393 54.297 119.976 132.056 1.00 33.15 O
ATOM 5 O5' C B2393 55.794 118.024 132.008 1.00 29.59 O
ATOM 6 C5' C B2393 56.289 116.798 131.493 1.00 28.96 C
ATOM 7 C4' C B2393 57.610 116.484 132.126 1.00 31.95 C
ATOM 8 O4' C B2393 58.605 117.435 131.651 1.00 31.78 O
ATOM 9 C3' C B2393 57.616 116.575 133.647 1.00 33.63 C
ATOM 10 O3' C B2393 58.420 115.551 134.194 1.00 36.33 O
ATOM 11 C2' C B2393 58.244 117.938 133.906 1.00 33.90 C
ATOM 12 O2' C B2393 58.916 118.005 135.149 1.00 35.12 O
ATOM 13 C1' C B2393 59.234 118.046 132.748 1.00 31.35 C
ATOM 14 N1 C B2393 59.578 119.433 132.389 1.00 30.00 N
ATOM 15 C2 C B2393 60.935 119.772 132.230 1.00 30.69 C
ATOM 16 O2 C B2393 61.793 118.877 132.281 1.00 33.15 O
ATOM 17 N3 C B2393 61.275 121.063 132.013 1.00 29.14 N
ATOM 18 C4 C B2393 60.326 121.996 131.929 1.00 30.13 C
ATOM 19 N4 C B2393 60.714 123.261 131.766 1.00 27.37 N
ATOM 20 C5 C B2393 58.934 121.673 132.022 1.00 30.64 C
ATOM 21 C6 C B2393 58.610 120.390 132.249 1.00 29.88 C
ATOM 22 P A B2394 57.789 114.547 135.268 1.00 37.53 P
ATOM 23 OP1 A B2394 56.794 113.690 134.582 1.00 37.35 O
ATOM 24 OP2 A B2394 57.371 115.343 136.440 1.00 39.97 O
ATOM 25 O5' A B2394 59.037 113.659 135.687 1.00 38.20 O
TER
ATOM 2 P A A2418 53.757 122.009 138.101 1.00 43.39 P
ATOM 3 OP1 A A2418 52.547 122.701 137.594 1.00 43.75 O
ATOM 4 OP2 A A2418 54.023 120.605 137.705 1.00 41.72 O
ATOM 5 O5' A A2418 55.013 122.894 137.694 1.00 40.62 O
ATOM 6 C5' A A2418 55.151 124.234 138.192 1.00 41.17 C
ATOM 7 C4' A A2418 55.687 125.146 137.115 1.00 41.30 C
ATOM 8 O4' A A2418 57.028 124.717 136.764 1.00 40.14 O
ATOM 9 C3' A A2418 54.895 125.176 135.814 1.00 41.64 C
ATOM 10 O3' A A2418 54.930 126.485 135.239 1.00 42.63 O
ATOM 11 C2' A A2418 55.624 124.151 134.952 1.00 40.21 C
ATOM 12 O2' A A2418 55.481 124.420 133.572 1.00 41.90 O
ATOM 13 C1' A A2418 57.073 124.331 135.406 1.00 38.22 C
ATOM 14 N9 A A2418 57.897 123.123 135.333 1.00 34.64 N
ATOM 15 C8 A A2418 57.505 121.807 135.254 1.00 33.86 C
ATOM 16 N7 A A2418 58.503 120.959 135.237 1.00 31.54 N
ATOM 17 C5 A A2418 59.627 121.767 135.297 1.00 33.23 C
ATOM 18 C6 A A2418 60.999 121.476 135.295 1.00 32.98 C
ATOM 19 N6 A A2418 61.489 120.243 135.211 1.00 34.66 N
ATOM 20 N1 A A2418 61.863 122.510 135.369 1.00 32.05 N
ATOM 21 C2 A A2418 61.369 123.753 135.420 1.00 33.29 C
ATOM 22 N3 A A2418 60.101 124.158 135.415 1.00 33.93 N
ATOM 23 C4 A A2418 59.269 123.102 135.354 1.00 34.58 C
ATOM 24 P G A2419 53.544 127.232 134.883 1.00 44.43 P
ATOM 25 OP1 G A2419 52.445 126.570 135.639 1.00 44.18 O
ATOM 26 OP2 G A2419 53.435 127.376 133.408 1.00 45.97 O
ATOM 27 O5' G A2419 53.717 128.686 135.496 1.00 42.35 O
TER
ATOM 1 O3' C B2392 54.583 118.670 129.911 1.00 32.03 O
ATOM 2 P C B2393 54.409 118.605 131.507 1.00 31.58 P
ATOM 3 OP1 C B2393 53.354 117.609 131.810 1.00 33.81 O
ATOM 4 OP2 C B2393 54.297 119.976 132.056 1.00 33.15 O
ATOM 5 O5' C B2393 55.794 118.024 132.008 1.00 29.59 O
ATOM 6 C5' C B2393 56.289 116.798 131.493 1.00 28.96 C
ATOM 7 C4' C B2393 57.610 116.484 132.126 1.00 31.95 C
ATOM 8 O4' C B2393 58.605 117.435 131.651 1.00 31.78 O
ATOM 9 C3' C B2393 57.616 116.575 133.647 1.00 33.63 C
ATOM 10 O3' C B2393 58.420 115.551 134.194 1.00 36.33 O
ATOM 11 C2' C B2393 58.244 117.938 133.906 1.00 33.90 C
ATOM 12 O2' C B2393 58.916 118.005 135.149 1.00 35.12 O
ATOM 13 C1' C B2393 59.234 118.046 132.748 1.00 31.35 C
ATOM 14 N1 C B2393 59.578 119.433 132.389 1.00 30.00 N
ATOM 15 C2 C B2393 60.935 119.772 132.230 1.00 30.69 C
ATOM 16 O2 C B2393 61.793 118.877 132.281 1.00 33.15 O
ATOM 17 N3 C B2393 61.275 121.063 132.013 1.00 29.14 N
ATOM 18 C4 C B2393 60.326 121.996 131.929 1.00 30.13 C
ATOM 19 N4 C B2393 60.714 123.261 131.766 1.00 27.37 N
ATOM 20 C5 C B2393 58.934 121.673 132.022 1.00 30.64 C
ATOM 21 C6 C B2393 58.610 120.390 132.249 1.00 29.88 C
ATOM 22 P A B2394 57.789 114.547 135.268 1.00 37.53 P
ATOM 23 OP1 A B2394 56.794 113.690 134.582 1.00 37.35 O
ATOM 24 OP2 A B2394 57.371 115.343 136.440 1.00 39.97 O
ATOM 25 O5' A B2394 59.037 113.659 135.687 1.00 38.20 O
TER
Atoms:
OP1: (52.547,122.701,137.594)
OP2: (54.023,120.605,137.705)
C3': (54.895,125.176,135.814)
C1': (57.073,124.331,135.406)
C5': (55.151,124.234,138.192)
O4': (57.028,124.717,136.764)
C8: (57.505,121.807,135.254)
O2': (55.481,124.420,133.572)
C6: (60.999,121.476,135.295)
C5: (59.627,121.767,135.297)
C4: (59.269,123.102,135.354)
P: (53.757,122.009,138.101)
C4': (55.687,125.146,137.115)
C2': (55.624,124.151,134.952)
C2: (61.369,123.753,135.420)
N1: (61.863,122.510,135.369)
N3: (60.101,124.158,135.415)
N6: (61.489,120.243,135.211)
N7: (58.503,120.959,135.237)
N9: (57.897,123.123,135.333)
O5': (55.013,122.894,137.694)
O3': (54.930,126.485,135.239)
OP2: (54.023,120.605,137.705)
C3': (54.895,125.176,135.814)
C1': (57.073,124.331,135.406)
C5': (55.151,124.234,138.192)
O4': (57.028,124.717,136.764)
C8: (57.505,121.807,135.254)
O2': (55.481,124.420,133.572)
C6: (60.999,121.476,135.295)
C5: (59.627,121.767,135.297)
C4: (59.269,123.102,135.354)
P: (53.757,122.009,138.101)
C4': (55.687,125.146,137.115)
C2': (55.624,124.151,134.952)
C2: (61.369,123.753,135.420)
N1: (61.863,122.510,135.369)
N3: (60.101,124.158,135.415)
N6: (61.489,120.243,135.211)
N7: (58.503,120.959,135.237)
N9: (57.897,123.123,135.333)
O5': (55.013,122.894,137.694)
O3': (54.930,126.485,135.239)
C2: (60.935,119.772,132.230)
OP1: (53.354,117.609,131.810)
OP2: (54.297,119.976,132.056)
C4: (60.326,121.996,131.929)
O5': (55.794,118.024,132.008)
C3': (57.616,116.575,133.647)
C1': (59.234,118.046,132.748)
O4': (58.605,117.435,131.651)
C5': (56.289,116.798,131.493)
P: (54.409,118.605,131.507)
O2: (61.793,118.877,132.281)
C4': (57.610,116.484,132.126)
C2': (58.244,117.938,133.906)
O2': (58.916,118.005,135.149)
N1: (59.578,119.433,132.389)
N3: (61.275,121.063,132.013)
N4: (60.714,123.261,131.766)
C6: (58.610,120.390,132.249)
C5: (58.934,121.673,132.022)
O3': (58.420,115.551,134.194)
OP1: (53.354,117.609,131.810)
OP2: (54.297,119.976,132.056)
C4: (60.326,121.996,131.929)
O5': (55.794,118.024,132.008)
C3': (57.616,116.575,133.647)
C1': (59.234,118.046,132.748)
O4': (58.605,117.435,131.651)
C5': (56.289,116.798,131.493)
P: (54.409,118.605,131.507)
O2: (61.793,118.877,132.281)
C4': (57.610,116.484,132.126)
C2': (58.244,117.938,133.906)
O2': (58.916,118.005,135.149)
N1: (59.578,119.433,132.389)
N3: (61.275,121.063,132.013)
N4: (60.714,123.261,131.766)
C6: (58.610,120.390,132.249)
C5: (58.934,121.673,132.022)
O3': (58.420,115.551,134.194)
Image (generated by PyMOL):