Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01311:0438
Extra
PDB:
ATOM 1 O3' G A1310 37.572 116.269 55.288 1.00 49.89 O
ATOM 2 P A A1311 38.859 116.879 54.539 1.00 51.26 P
ATOM 3 OP1 A A1311 38.360 117.856 53.536 1.00 49.50 O
ATOM 4 OP2 A A1311 39.729 115.759 54.094 1.00 49.17 O
ATOM 5 O5' A A1311 39.612 117.687 55.690 1.00 52.98 O
ATOM 6 C5' A A1311 39.790 117.137 57.015 1.00 53.51 C
ATOM 7 C4' A A1311 39.879 118.257 58.018 1.00 55.51 C
ATOM 8 O4' A A1311 40.922 119.161 57.568 1.00 57.78 O
ATOM 9 C3' A A1311 38.631 119.131 58.083 1.00 57.37 C
ATOM 10 O3' A A1311 37.605 118.709 58.988 1.00 57.07 O
ATOM 11 C2' A A1311 39.195 120.469 58.540 1.00 59.26 C
ATOM 12 O2' A A1311 39.455 120.532 59.932 1.00 61.45 O
ATOM 13 C1' A A1311 40.518 120.508 57.776 1.00 58.74 C
ATOM 14 N9 A A1311 40.425 121.179 56.473 1.00 57.21 N
ATOM 15 C8 A A1311 39.367 121.205 55.594 1.00 55.47 C
ATOM 16 N7 A A1311 39.598 121.902 54.510 1.00 54.67 N
ATOM 17 C5 A A1311 40.893 122.368 54.683 1.00 55.31 C
ATOM 18 C6 A A1311 41.723 123.161 53.885 1.00 55.22 C
ATOM 19 N6 A A1311 41.351 123.663 52.705 1.00 57.59 N
ATOM 20 N1 A A1311 42.964 123.431 54.341 1.00 53.73 N
ATOM 21 C2 A A1311 43.333 122.937 55.518 1.00 53.08 C
ATOM 22 N3 A A1311 42.646 122.185 56.364 1.00 55.56 N
ATOM 23 C4 A A1311 41.416 121.930 55.883 1.00 56.41 C
ATOM 24 P C A1312 37.931 117.702 60.214 1.00 57.35 P
ATOM 25 OP1 C A1312 38.891 118.358 61.149 1.00 54.81 O
ATOM 26 OP2 C A1312 38.217 116.325 59.695 1.00 56.13 O
ATOM 27 O5' C A1312 36.540 117.658 60.975 1.00 52.08 O
TER
ATOM 1 O3' A B 437 32.652 120.344 47.701 1.00 45.56 O
ATOM 2 P C B 438 33.808 121.337 47.189 1.00 46.21 P
ATOM 3 OP1 C B 438 33.142 122.613 46.855 1.00 45.62 O
ATOM 4 OP2 C B 438 34.679 120.675 46.180 1.00 42.39 O
ATOM 5 O5' C B 438 34.670 121.602 48.501 1.00 46.67 O
ATOM 6 C5' C B 438 35.304 120.525 49.208 1.00 45.97 C
ATOM 7 C4' C B 438 36.607 121.005 49.787 1.00 47.28 C
ATOM 8 O4' C B 438 37.522 121.329 48.703 1.00 49.56 O
ATOM 9 C3' C B 438 36.498 122.298 50.577 1.00 46.39 C
ATOM 10 O3' C B 438 36.093 122.060 51.911 1.00 43.55 O
ATOM 11 C2' C B 438 37.908 122.846 50.478 1.00 47.44 C
ATOM 12 O2' C B 438 38.776 122.137 51.333 1.00 49.39 O
ATOM 13 C1' C B 438 38.254 122.500 49.027 1.00 48.28 C
ATOM 14 N1 C B 438 37.873 123.568 48.078 1.00 48.90 N
ATOM 15 C2 C B 438 38.775 124.609 47.838 1.00 49.55 C
ATOM 16 O2 C B 438 39.879 124.588 48.394 1.00 48.81 O
ATOM 17 N3 C B 438 38.420 125.613 46.999 1.00 51.41 N
ATOM 18 C4 C B 438 37.226 125.596 46.402 1.00 51.53 C
ATOM 19 N4 C B 438 36.922 126.610 45.592 1.00 51.78 N
ATOM 20 C5 C B 438 36.295 124.540 46.612 1.00 50.99 C
ATOM 21 C6 C B 438 36.655 123.557 47.450 1.00 49.74 C
ATOM 22 P C B 439 35.121 123.105 52.639 1.00 45.42 P
ATOM 23 OP1 C B 439 34.693 122.490 53.929 1.00 44.33 O
ATOM 24 OP2 C B 439 34.094 123.556 51.665 1.00 46.05 O
ATOM 25 O5' C B 439 36.066 124.354 52.943 1.00 45.64 O
TER
ATOM 2 P A A1311 38.859 116.879 54.539 1.00 51.26 P
ATOM 3 OP1 A A1311 38.360 117.856 53.536 1.00 49.50 O
ATOM 4 OP2 A A1311 39.729 115.759 54.094 1.00 49.17 O
ATOM 5 O5' A A1311 39.612 117.687 55.690 1.00 52.98 O
ATOM 6 C5' A A1311 39.790 117.137 57.015 1.00 53.51 C
ATOM 7 C4' A A1311 39.879 118.257 58.018 1.00 55.51 C
ATOM 8 O4' A A1311 40.922 119.161 57.568 1.00 57.78 O
ATOM 9 C3' A A1311 38.631 119.131 58.083 1.00 57.37 C
ATOM 10 O3' A A1311 37.605 118.709 58.988 1.00 57.07 O
ATOM 11 C2' A A1311 39.195 120.469 58.540 1.00 59.26 C
ATOM 12 O2' A A1311 39.455 120.532 59.932 1.00 61.45 O
ATOM 13 C1' A A1311 40.518 120.508 57.776 1.00 58.74 C
ATOM 14 N9 A A1311 40.425 121.179 56.473 1.00 57.21 N
ATOM 15 C8 A A1311 39.367 121.205 55.594 1.00 55.47 C
ATOM 16 N7 A A1311 39.598 121.902 54.510 1.00 54.67 N
ATOM 17 C5 A A1311 40.893 122.368 54.683 1.00 55.31 C
ATOM 18 C6 A A1311 41.723 123.161 53.885 1.00 55.22 C
ATOM 19 N6 A A1311 41.351 123.663 52.705 1.00 57.59 N
ATOM 20 N1 A A1311 42.964 123.431 54.341 1.00 53.73 N
ATOM 21 C2 A A1311 43.333 122.937 55.518 1.00 53.08 C
ATOM 22 N3 A A1311 42.646 122.185 56.364 1.00 55.56 N
ATOM 23 C4 A A1311 41.416 121.930 55.883 1.00 56.41 C
ATOM 24 P C A1312 37.931 117.702 60.214 1.00 57.35 P
ATOM 25 OP1 C A1312 38.891 118.358 61.149 1.00 54.81 O
ATOM 26 OP2 C A1312 38.217 116.325 59.695 1.00 56.13 O
ATOM 27 O5' C A1312 36.540 117.658 60.975 1.00 52.08 O
TER
ATOM 1 O3' A B 437 32.652 120.344 47.701 1.00 45.56 O
ATOM 2 P C B 438 33.808 121.337 47.189 1.00 46.21 P
ATOM 3 OP1 C B 438 33.142 122.613 46.855 1.00 45.62 O
ATOM 4 OP2 C B 438 34.679 120.675 46.180 1.00 42.39 O
ATOM 5 O5' C B 438 34.670 121.602 48.501 1.00 46.67 O
ATOM 6 C5' C B 438 35.304 120.525 49.208 1.00 45.97 C
ATOM 7 C4' C B 438 36.607 121.005 49.787 1.00 47.28 C
ATOM 8 O4' C B 438 37.522 121.329 48.703 1.00 49.56 O
ATOM 9 C3' C B 438 36.498 122.298 50.577 1.00 46.39 C
ATOM 10 O3' C B 438 36.093 122.060 51.911 1.00 43.55 O
ATOM 11 C2' C B 438 37.908 122.846 50.478 1.00 47.44 C
ATOM 12 O2' C B 438 38.776 122.137 51.333 1.00 49.39 O
ATOM 13 C1' C B 438 38.254 122.500 49.027 1.00 48.28 C
ATOM 14 N1 C B 438 37.873 123.568 48.078 1.00 48.90 N
ATOM 15 C2 C B 438 38.775 124.609 47.838 1.00 49.55 C
ATOM 16 O2 C B 438 39.879 124.588 48.394 1.00 48.81 O
ATOM 17 N3 C B 438 38.420 125.613 46.999 1.00 51.41 N
ATOM 18 C4 C B 438 37.226 125.596 46.402 1.00 51.53 C
ATOM 19 N4 C B 438 36.922 126.610 45.592 1.00 51.78 N
ATOM 20 C5 C B 438 36.295 124.540 46.612 1.00 50.99 C
ATOM 21 C6 C B 438 36.655 123.557 47.450 1.00 49.74 C
ATOM 22 P C B 439 35.121 123.105 52.639 1.00 45.42 P
ATOM 23 OP1 C B 439 34.693 122.490 53.929 1.00 44.33 O
ATOM 24 OP2 C B 439 34.094 123.556 51.665 1.00 46.05 O
ATOM 25 O5' C B 439 36.066 124.354 52.943 1.00 45.64 O
TER
Atoms:
OP1: (38.360,117.856,53.536)
OP2: (39.729,115.759,54.094)
C3': (38.631,119.131,58.083)
C1': (40.518,120.508,57.776)
C5': (39.790,117.137,57.015)
O4': (40.922,119.161,57.568)
C8: (39.367,121.205,55.594)
O2': (39.455,120.532,59.932)
C6: (41.723,123.161,53.885)
C5: (40.893,122.368,54.683)
C4: (41.416,121.930,55.883)
P: (38.859,116.879,54.539)
C4': (39.879,118.257,58.018)
C2': (39.195,120.469,58.540)
C2: (43.333,122.937,55.518)
N1: (42.964,123.431,54.341)
N3: (42.646,122.185,56.364)
N6: (41.351,123.663,52.705)
N7: (39.598,121.902,54.510)
N9: (40.425,121.179,56.473)
O5': (39.612,117.687,55.690)
O3': (37.605,118.709,58.988)
OP2: (39.729,115.759,54.094)
C3': (38.631,119.131,58.083)
C1': (40.518,120.508,57.776)
C5': (39.790,117.137,57.015)
O4': (40.922,119.161,57.568)
C8: (39.367,121.205,55.594)
O2': (39.455,120.532,59.932)
C6: (41.723,123.161,53.885)
C5: (40.893,122.368,54.683)
C4: (41.416,121.930,55.883)
P: (38.859,116.879,54.539)
C4': (39.879,118.257,58.018)
C2': (39.195,120.469,58.540)
C2: (43.333,122.937,55.518)
N1: (42.964,123.431,54.341)
N3: (42.646,122.185,56.364)
N6: (41.351,123.663,52.705)
N7: (39.598,121.902,54.510)
N9: (40.425,121.179,56.473)
O5': (39.612,117.687,55.690)
O3': (37.605,118.709,58.988)
C2: (38.775,124.609,47.838)
OP1: (33.142,122.613,46.855)
OP2: (34.679,120.675,46.180)
C4: (37.226,125.596,46.402)
O5': (34.670,121.602,48.501)
C3': (36.498,122.298,50.577)
C1': (38.254,122.500,49.027)
O4': (37.522,121.329,48.703)
C5': (35.304,120.525,49.208)
P: (33.808,121.337,47.189)
O2: (39.879,124.588,48.394)
C4': (36.607,121.005,49.787)
C2': (37.908,122.846,50.478)
O2': (38.776,122.137,51.333)
N1: (37.873,123.568,48.078)
N3: (38.420,125.613,46.999)
N4: (36.922,126.610,45.592)
C6: (36.655,123.557,47.450)
C5: (36.295,124.540,46.612)
O3': (36.093,122.060,51.911)
OP1: (33.142,122.613,46.855)
OP2: (34.679,120.675,46.180)
C4: (37.226,125.596,46.402)
O5': (34.670,121.602,48.501)
C3': (36.498,122.298,50.577)
C1': (38.254,122.500,49.027)
O4': (37.522,121.329,48.703)
C5': (35.304,120.525,49.208)
P: (33.808,121.337,47.189)
O2: (39.879,124.588,48.394)
C4': (36.607,121.005,49.787)
C2': (37.908,122.846,50.478)
O2': (38.776,122.137,51.333)
N1: (37.873,123.568,48.078)
N3: (38.420,125.613,46.999)
N4: (36.922,126.610,45.592)
C6: (36.655,123.557,47.450)
C5: (36.295,124.540,46.612)
O3': (36.093,122.060,51.911)
Image (generated by PyMOL):