Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01311:0438
Extra
PDB:
ATOM 1 O3' G A1310 37.319 116.013 55.052 1.00 43.76 O
ATOM 2 P A A1311 38.545 116.712 54.287 1.00 44.81 P
ATOM 3 OP1 A A1311 37.950 117.608 53.260 1.00 41.54 O
ATOM 4 OP2 A A1311 39.522 115.678 53.872 1.00 43.87 O
ATOM 5 O5' A A1311 39.242 117.588 55.422 1.00 45.97 O
ATOM 6 C5' A A1311 39.567 117.029 56.713 1.00 47.44 C
ATOM 7 C4' A A1311 39.713 118.139 57.717 1.00 50.29 C
ATOM 8 O4' A A1311 40.756 119.029 57.236 1.00 52.56 O
ATOM 9 C3' A A1311 38.481 119.027 57.811 1.00 52.83 C
ATOM 10 O3' A A1311 37.469 118.635 58.738 1.00 54.02 O
ATOM 11 C2' A A1311 39.071 120.363 58.237 1.00 54.52 C
ATOM 12 O2' A A1311 39.350 120.420 59.627 1.00 56.90 O
ATOM 13 C1' A A1311 40.371 120.382 57.433 1.00 53.03 C
ATOM 14 N9 A A1311 40.256 121.023 56.116 1.00 50.80 N
ATOM 15 C8 A A1311 39.222 120.953 55.214 1.00 49.17 C
ATOM 16 N7 A A1311 39.438 121.626 54.110 1.00 48.74 N
ATOM 17 C5 A A1311 40.694 122.182 54.299 1.00 49.14 C
ATOM 18 C6 A A1311 41.499 123.004 53.491 1.00 48.81 C
ATOM 19 N6 A A1311 41.143 123.448 52.283 1.00 46.93 N
ATOM 20 N1 A A1311 42.702 123.364 53.974 1.00 49.96 N
ATOM 21 C2 A A1311 43.063 122.934 55.187 1.00 49.76 C
ATOM 22 N3 A A1311 42.399 122.171 56.039 1.00 50.05 N
ATOM 23 C4 A A1311 41.207 121.822 55.530 1.00 49.96 C
ATOM 24 P C A1312 37.776 117.579 59.923 1.00 55.67 P
ATOM 25 OP1 C A1312 38.686 118.212 60.923 1.00 53.13 O
ATOM 26 OP2 C A1312 38.114 116.241 59.363 1.00 55.18 O
ATOM 27 O5' C A1312 36.346 117.480 60.609 1.00 51.22 O
TER
ATOM 1 O3' A B 437 32.449 120.199 47.427 1.00 34.69 O
ATOM 2 P C B 438 33.573 121.197 46.889 1.00 35.81 P
ATOM 3 OP1 C B 438 32.947 122.490 46.564 1.00 36.32 O
ATOM 4 OP2 C B 438 34.364 120.484 45.854 1.00 35.63 O
ATOM 5 O5' C B 438 34.490 121.439 48.160 1.00 37.73 O
ATOM 6 C5' C B 438 35.160 120.347 48.802 1.00 39.35 C
ATOM 7 C4' C B 438 36.449 120.830 49.403 1.00 40.03 C
ATOM 8 O4' C B 438 37.376 121.175 48.341 1.00 40.31 O
ATOM 9 C3' C B 438 36.318 122.101 50.226 1.00 39.79 C
ATOM 10 O3' C B 438 35.899 121.811 51.554 1.00 38.77 O
ATOM 11 C2' C B 438 37.725 122.668 50.151 1.00 40.82 C
ATOM 12 O2' C B 438 38.612 121.986 51.013 1.00 41.39 O
ATOM 13 C1' C B 438 38.093 122.343 48.701 1.00 41.08 C
ATOM 14 N1 C B 438 37.714 123.421 47.771 1.00 42.08 N
ATOM 15 C2 C B 438 38.601 124.471 47.573 1.00 42.68 C
ATOM 16 O2 C B 438 39.688 124.452 48.162 1.00 43.02 O
ATOM 17 N3 C B 438 38.253 125.484 46.743 1.00 43.69 N
ATOM 18 C4 C B 438 37.072 125.466 46.125 1.00 42.91 C
ATOM 19 N4 C B 438 36.763 126.493 45.337 1.00 43.09 N
ATOM 20 C5 C B 438 36.155 124.396 46.293 1.00 43.46 C
ATOM 21 C6 C B 438 36.511 123.403 47.118 1.00 43.10 C
ATOM 22 P C B 439 34.940 122.835 52.332 1.00 38.57 P
ATOM 23 OP1 C B 439 34.602 122.195 53.628 1.00 35.74 O
ATOM 24 OP2 C B 439 33.851 123.256 51.421 1.00 38.20 O
ATOM 25 O5' C B 439 35.882 124.092 52.598 1.00 36.98 O
TER
ATOM 2 P A A1311 38.545 116.712 54.287 1.00 44.81 P
ATOM 3 OP1 A A1311 37.950 117.608 53.260 1.00 41.54 O
ATOM 4 OP2 A A1311 39.522 115.678 53.872 1.00 43.87 O
ATOM 5 O5' A A1311 39.242 117.588 55.422 1.00 45.97 O
ATOM 6 C5' A A1311 39.567 117.029 56.713 1.00 47.44 C
ATOM 7 C4' A A1311 39.713 118.139 57.717 1.00 50.29 C
ATOM 8 O4' A A1311 40.756 119.029 57.236 1.00 52.56 O
ATOM 9 C3' A A1311 38.481 119.027 57.811 1.00 52.83 C
ATOM 10 O3' A A1311 37.469 118.635 58.738 1.00 54.02 O
ATOM 11 C2' A A1311 39.071 120.363 58.237 1.00 54.52 C
ATOM 12 O2' A A1311 39.350 120.420 59.627 1.00 56.90 O
ATOM 13 C1' A A1311 40.371 120.382 57.433 1.00 53.03 C
ATOM 14 N9 A A1311 40.256 121.023 56.116 1.00 50.80 N
ATOM 15 C8 A A1311 39.222 120.953 55.214 1.00 49.17 C
ATOM 16 N7 A A1311 39.438 121.626 54.110 1.00 48.74 N
ATOM 17 C5 A A1311 40.694 122.182 54.299 1.00 49.14 C
ATOM 18 C6 A A1311 41.499 123.004 53.491 1.00 48.81 C
ATOM 19 N6 A A1311 41.143 123.448 52.283 1.00 46.93 N
ATOM 20 N1 A A1311 42.702 123.364 53.974 1.00 49.96 N
ATOM 21 C2 A A1311 43.063 122.934 55.187 1.00 49.76 C
ATOM 22 N3 A A1311 42.399 122.171 56.039 1.00 50.05 N
ATOM 23 C4 A A1311 41.207 121.822 55.530 1.00 49.96 C
ATOM 24 P C A1312 37.776 117.579 59.923 1.00 55.67 P
ATOM 25 OP1 C A1312 38.686 118.212 60.923 1.00 53.13 O
ATOM 26 OP2 C A1312 38.114 116.241 59.363 1.00 55.18 O
ATOM 27 O5' C A1312 36.346 117.480 60.609 1.00 51.22 O
TER
ATOM 1 O3' A B 437 32.449 120.199 47.427 1.00 34.69 O
ATOM 2 P C B 438 33.573 121.197 46.889 1.00 35.81 P
ATOM 3 OP1 C B 438 32.947 122.490 46.564 1.00 36.32 O
ATOM 4 OP2 C B 438 34.364 120.484 45.854 1.00 35.63 O
ATOM 5 O5' C B 438 34.490 121.439 48.160 1.00 37.73 O
ATOM 6 C5' C B 438 35.160 120.347 48.802 1.00 39.35 C
ATOM 7 C4' C B 438 36.449 120.830 49.403 1.00 40.03 C
ATOM 8 O4' C B 438 37.376 121.175 48.341 1.00 40.31 O
ATOM 9 C3' C B 438 36.318 122.101 50.226 1.00 39.79 C
ATOM 10 O3' C B 438 35.899 121.811 51.554 1.00 38.77 O
ATOM 11 C2' C B 438 37.725 122.668 50.151 1.00 40.82 C
ATOM 12 O2' C B 438 38.612 121.986 51.013 1.00 41.39 O
ATOM 13 C1' C B 438 38.093 122.343 48.701 1.00 41.08 C
ATOM 14 N1 C B 438 37.714 123.421 47.771 1.00 42.08 N
ATOM 15 C2 C B 438 38.601 124.471 47.573 1.00 42.68 C
ATOM 16 O2 C B 438 39.688 124.452 48.162 1.00 43.02 O
ATOM 17 N3 C B 438 38.253 125.484 46.743 1.00 43.69 N
ATOM 18 C4 C B 438 37.072 125.466 46.125 1.00 42.91 C
ATOM 19 N4 C B 438 36.763 126.493 45.337 1.00 43.09 N
ATOM 20 C5 C B 438 36.155 124.396 46.293 1.00 43.46 C
ATOM 21 C6 C B 438 36.511 123.403 47.118 1.00 43.10 C
ATOM 22 P C B 439 34.940 122.835 52.332 1.00 38.57 P
ATOM 23 OP1 C B 439 34.602 122.195 53.628 1.00 35.74 O
ATOM 24 OP2 C B 439 33.851 123.256 51.421 1.00 38.20 O
ATOM 25 O5' C B 439 35.882 124.092 52.598 1.00 36.98 O
TER
Atoms:
OP1: (37.950,117.608,53.260)
OP2: (39.522,115.678,53.872)
C3': (38.481,119.027,57.811)
C1': (40.371,120.382,57.433)
C5': (39.567,117.029,56.713)
O4': (40.756,119.029,57.236)
C8: (39.222,120.953,55.214)
O2': (39.350,120.420,59.627)
C6: (41.499,123.004,53.491)
C5: (40.694,122.182,54.299)
C4: (41.207,121.822,55.530)
P: (38.545,116.712,54.287)
C4': (39.713,118.139,57.717)
C2': (39.071,120.363,58.237)
C2: (43.063,122.934,55.187)
N1: (42.702,123.364,53.974)
N3: (42.399,122.171,56.039)
N6: (41.143,123.448,52.283)
N7: (39.438,121.626,54.110)
N9: (40.256,121.023,56.116)
O5': (39.242,117.588,55.422)
O3': (37.469,118.635,58.738)
OP2: (39.522,115.678,53.872)
C3': (38.481,119.027,57.811)
C1': (40.371,120.382,57.433)
C5': (39.567,117.029,56.713)
O4': (40.756,119.029,57.236)
C8: (39.222,120.953,55.214)
O2': (39.350,120.420,59.627)
C6: (41.499,123.004,53.491)
C5: (40.694,122.182,54.299)
C4: (41.207,121.822,55.530)
P: (38.545,116.712,54.287)
C4': (39.713,118.139,57.717)
C2': (39.071,120.363,58.237)
C2: (43.063,122.934,55.187)
N1: (42.702,123.364,53.974)
N3: (42.399,122.171,56.039)
N6: (41.143,123.448,52.283)
N7: (39.438,121.626,54.110)
N9: (40.256,121.023,56.116)
O5': (39.242,117.588,55.422)
O3': (37.469,118.635,58.738)
C2: (38.601,124.471,47.573)
OP1: (32.947,122.490,46.564)
OP2: (34.364,120.484,45.854)
C4: (37.072,125.466,46.125)
O5': (34.490,121.439,48.160)
C3': (36.318,122.101,50.226)
C1': (38.093,122.343,48.701)
O4': (37.376,121.175,48.341)
C5': (35.160,120.347,48.802)
P: (33.573,121.197,46.889)
O2: (39.688,124.452,48.162)
C4': (36.449,120.830,49.403)
C2': (37.725,122.668,50.151)
O2': (38.612,121.986,51.013)
N1: (37.714,123.421,47.771)
N3: (38.253,125.484,46.743)
N4: (36.763,126.493,45.337)
C6: (36.511,123.403,47.118)
C5: (36.155,124.396,46.293)
O3': (35.899,121.811,51.554)
OP1: (32.947,122.490,46.564)
OP2: (34.364,120.484,45.854)
C4: (37.072,125.466,46.125)
O5': (34.490,121.439,48.160)
C3': (36.318,122.101,50.226)
C1': (38.093,122.343,48.701)
O4': (37.376,121.175,48.341)
C5': (35.160,120.347,48.802)
P: (33.573,121.197,46.889)
O2: (39.688,124.452,48.162)
C4': (36.449,120.830,49.403)
C2': (37.725,122.668,50.151)
O2': (38.612,121.986,51.013)
N1: (37.714,123.421,47.771)
N3: (38.253,125.484,46.743)
N4: (36.763,126.493,45.337)
C6: (36.511,123.403,47.118)
C5: (36.155,124.396,46.293)
O3': (35.899,121.811,51.554)
Image (generated by PyMOL):