ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A1474:A896

Extra

PDB:
ATOM 1 O3' C A1473 -40.168 106.434 78.608 1.00 27.37 O
ATOM 2 P A A1474 -39.563 107.790 77.984 1.00 53.65 P
ATOM 3 OP1 A A1474 -39.107 107.509 76.599 1.00 53.49 O
ATOM 4 OP2 A A1474 -38.611 108.384 78.958 1.00 59.29 O
ATOM 5 O5' A A1474 -40.807 108.773 77.879 1.00 12.11 O
ATOM 6 C5' A A1474 -42.109 108.283 77.590 1.00 13.05 C
ATOM 7 C4' A A1474 -42.725 109.085 76.481 1.00 13.64 C
ATOM 8 O4' A A1474 -44.036 108.531 76.248 1.00 15.11 O
ATOM 9 C3' A A1474 -42.926 110.581 76.735 1.00 12.58 C
ATOM 10 O3' A A1474 -42.826 111.276 75.481 1.00 12.00 O
ATOM 11 C2' A A1474 -44.382 110.649 77.184 1.00 14.65 C
ATOM 12 O2' A A1474 -44.998 111.880 76.868 1.00 15.38 O
ATOM 13 C1' A A1474 -44.992 109.554 76.320 1.00 16.48 C
ATOM 14 N9 A A1474 -46.275 108.971 76.702 1.00 31.50 N
ATOM 15 C8 A A1474 -46.909 107.977 76.007 1.00 34.11 C
ATOM 16 N7 A A1474 -48.077 107.650 76.488 1.00 32.15 N
ATOM 17 C5 A A1474 -48.221 108.476 77.582 1.00 33.33 C
ATOM 18 C6 A A1474 -49.249 108.620 78.490 1.00 34.99 C
ATOM 19 N6 A A1474 -50.387 107.928 78.421 1.00 33.43 N
ATOM 20 N1 A A1474 -49.082 109.515 79.479 1.00 37.70 N
ATOM 21 C2 A A1474 -47.944 110.224 79.519 1.00 35.63 C
ATOM 22 N3 A A1474 -46.905 110.191 78.702 1.00 30.62 N
ATOM 23 C4 A A1474 -47.108 109.284 77.742 1.00 31.50 C
ATOM 24 P A A1475 -41.472 112.054 75.086 1.00 20.17 P
ATOM 25 OP1 A A1475 -41.722 112.727 73.783 1.00 78.98 O
ATOM 26 OP2 A A1475 -40.322 111.118 75.217 1.00 82.75 O
ATOM 27 O5' A A1475 -41.333 113.170 76.216 1.00 79.07 O
TER

ATOM 1 O3' A B 895 -55.077 103.089 71.332 1.00 22.83 O
ATOM 2 P C B 896 -55.360 104.659 71.124 1.00 23.35 P
ATOM 3 OP1 C B 896 -56.788 104.861 71.492 1.00 25.85 O
ATOM 4 OP2 C B 896 -54.874 105.061 69.783 1.00 19.71 O
ATOM 5 O5' C B 896 -54.409 105.380 72.178 1.00 38.02 O
ATOM 6 C5' C B 896 -54.545 105.100 73.577 1.00 38.79 C
ATOM 7 C4' C B 896 -53.357 105.616 74.335 1.00 39.13 C
ATOM 8 O4' C B 896 -52.166 104.888 73.954 1.00 38.94 O
ATOM 9 C3' C B 896 -53.001 107.068 74.097 1.00 39.43 C
ATOM 10 O3' C B 896 -53.835 107.925 74.878 1.00 40.64 O
ATOM 11 C2' C B 896 -51.533 107.109 74.515 1.00 39.76 C
ATOM 12 O2' C B 896 -51.342 107.208 75.912 1.00 40.04 O
ATOM 13 C1' C B 896 -51.042 105.733 74.070 1.00 38.51 C
ATOM 14 N1 C B 896 -50.328 105.781 72.787 1.00 21.76 N
ATOM 15 C2 C B 896 -48.956 106.054 72.802 1.00 21.68 C
ATOM 16 O2 C B 896 -48.389 106.201 73.887 1.00 24.85 O
ATOM 17 N3 C B 896 -48.280 106.150 71.640 1.00 19.18 N
ATOM 18 C4 C B 896 -48.919 105.980 70.491 1.00 17.98 C
ATOM 19 N4 C B 896 -48.218 106.113 69.371 1.00 17.85 N
ATOM 20 C5 C B 896 -50.312 105.674 70.439 1.00 19.95 C
ATOM 21 C6 C B 896 -50.973 105.585 71.601 1.00 20.42 C
ATOM 22 P G B 897 -54.031 109.468 74.452 1.00 36.32 P
ATOM 23 OP1 G B 897 -55.106 109.982 75.348 1.00 30.00 O
ATOM 24 OP2 G B 897 -54.183 109.585 72.985 1.00 29.40 O
ATOM 25 O5' G B 897 -52.630 110.133 74.807 1.00 41.63 O
TER

Atoms:
OP1: (-39.107,107.509,76.599)
OP2: (-38.611,108.384,78.958)
C3': (-42.926,110.581,76.735)
C1': (-44.992,109.554,76.320)
C5': (-42.109,108.283,77.590)
O4': (-44.036,108.531,76.248)
C8: (-46.909,107.977,76.007)
O2': (-44.998,111.880,76.868)
C6: (-49.249,108.620,78.490)
C5: (-48.221,108.476,77.582)
C4: (-47.108,109.284,77.742)
P: (-39.563,107.790,77.984)
C4': (-42.725,109.085,76.481)
C2': (-44.382,110.649,77.184)
C2: (-47.944,110.224,79.519)
N1: (-49.082,109.515,79.479)
N3: (-46.905,110.191,78.702)
N6: (-50.387,107.928,78.421)
N7: (-48.077,107.650,76.488)
N9: (-46.275,108.971,76.702)
O5': (-40.807,108.773,77.879)
O3': (-42.826,111.276,75.481)
C2: (-48.956,106.054,72.802)
OP1: (-56.788,104.861,71.492)
OP2: (-54.874,105.061,69.783)
C4: (-48.919,105.980,70.491)
O5': (-54.409,105.380,72.178)
C3': (-53.001,107.068,74.097)
C1': (-51.042,105.733,74.070)
O4': (-52.166,104.888,73.954)
C5': (-54.545,105.100,73.577)
P: (-55.360,104.659,71.124)
O2: (-48.389,106.201,73.887)
C4': (-53.357,105.616,74.335)
C2': (-51.533,107.109,74.515)
O2': (-51.342,107.208,75.912)
N1: (-50.328,105.781,72.787)
N3: (-48.280,106.150,71.640)
N4: (-48.218,106.113,69.371)
C6: (-50.973,105.585,71.601)
C5: (-50.312,105.674,70.439)
O3': (-53.835,107.925,74.878)
Image (generated by PyMOL):
PyMOL image
show in jmol