Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1077:A2320
Extra
PDB:
ATOM 1 O3' A A1076 105.315 -68.186 20.421 1.00 41.74 O
ATOM 2 P A A1077 105.117 -69.100 19.109 1.00 42.66 P
ATOM 3 OP1 A A1077 105.098 -70.512 19.551 1.00 44.63 O
ATOM 4 OP2 A A1077 106.123 -68.672 18.104 1.00 28.35 O
ATOM 5 O5' A A1077 103.680 -68.699 18.625 1.00 63.65 O
ATOM 6 C5' A A1077 103.162 -67.410 18.864 1.00 53.01 C
ATOM 7 C4' A A1077 101.754 -67.321 18.377 1.00 48.96 C
ATOM 8 O4' A A1077 101.333 -65.943 18.395 1.00 46.33 O
ATOM 9 C3' A A1077 101.541 -67.817 16.960 1.00 46.44 C
ATOM 10 O3' A A1077 100.278 -68.450 16.881 1.00 53.26 O
ATOM 11 C2' A A1077 101.513 -66.531 16.148 1.00 46.99 C
ATOM 12 O2' A A1077 100.769 -66.628 14.953 1.00 53.30 O
ATOM 13 C1' A A1077 100.867 -65.567 17.130 1.00 40.23 C
ATOM 14 N9 A A1077 101.222 -64.170 16.934 1.00 35.71 N
ATOM 15 C8 A A1077 101.861 -63.547 15.903 1.00 38.09 C
ATOM 16 N7 A A1077 101.988 -62.256 16.105 1.00 37.93 N
ATOM 17 C5 A A1077 101.403 -62.036 17.342 1.00 32.71 C
ATOM 18 C6 A A1077 101.235 -60.891 18.118 1.00 34.30 C
ATOM 19 N6 A A1077 101.661 -59.684 17.720 1.00 38.06 N
ATOM 20 N1 A A1077 100.607 -61.023 19.309 1.00 34.50 N
ATOM 21 C2 A A1077 100.199 -62.233 19.691 1.00 33.68 C
ATOM 22 N3 A A1077 100.308 -63.380 19.043 1.00 32.62 N
ATOM 23 C4 A A1077 100.926 -63.205 17.863 1.00 34.05 C
ATOM 24 P A A1078 100.057 -69.724 15.937 1.00 68.25 P
ATOM 25 OP1 A A1078 100.385 -70.917 16.748 1.00 65.75 O
ATOM 26 OP2 A A1078 100.807 -69.489 14.667 1.00 65.62 O
ATOM 27 O5' A A1078 98.491 -69.665 15.650 1.00 62.79 O
TER
ATOM 1 O3' G B2319 104.323 -64.344 13.524 1.00 46.67 O
ATOM 2 P G B2320 103.670 -65.115 12.252 1.00 38.98 P
ATOM 3 OP1 G B2320 102.713 -66.100 12.788 1.00 37.09 O
ATOM 4 OP2 G B2320 104.784 -65.595 11.391 1.00 44.23 O
ATOM 5 O5' G B2320 102.891 -63.961 11.518 1.00 38.85 O
ATOM 6 C5' G B2320 102.113 -63.046 12.256 1.00 37.47 C
ATOM 7 C4' G B2320 101.822 -61.819 11.453 1.00 37.76 C
ATOM 8 O4' G B2320 103.064 -61.167 11.126 1.00 45.81 O
ATOM 9 C3' G B2320 101.120 -62.071 10.141 1.00 41.88 C
ATOM 10 O3' G B2320 100.264 -60.994 9.877 1.00 55.96 O
ATOM 11 C2' G B2320 102.245 -62.064 9.129 1.00 45.49 C
ATOM 12 O2' G B2320 101.845 -61.698 7.822 1.00 50.50 O
ATOM 13 C1' G B2320 103.204 -61.048 9.730 1.00 45.61 C
ATOM 14 N9 G B2320 104.610 -61.305 9.406 1.00 47.21 N
ATOM 15 C8 G B2320 105.197 -62.545 9.495 1.00 48.18 C
ATOM 16 N7 G B2320 106.454 -62.528 9.163 1.00 52.51 N
ATOM 17 C5 G B2320 106.711 -61.198 8.846 1.00 45.90 C
ATOM 18 C6 G B2320 107.911 -60.583 8.422 1.00 46.13 C
ATOM 19 O6 G B2320 109.008 -61.101 8.231 1.00 57.50 O
ATOM 20 N1 G B2320 107.757 -59.229 8.211 1.00 44.57 N
ATOM 21 C2 G B2320 106.592 -58.541 8.394 1.00 40.19 C
ATOM 22 N2 G B2320 106.647 -57.226 8.146 1.00 37.10 N
ATOM 23 N3 G B2320 105.471 -59.101 8.794 1.00 38.07 N
ATOM 24 C4 G B2320 105.590 -60.425 8.992 1.00 39.12 C
ATOM 25 P U B2321 98.693 -61.217 9.852 1.00 42.81 P
ATOM 26 OP1 U B2321 98.400 -62.431 10.641 1.00 63.61 O
ATOM 27 OP2 U B2321 98.275 -61.173 8.416 1.00 65.01 O
ATOM 28 O5' U B2321 98.181 -59.943 10.617 1.00 44.04 O
TER
ATOM 2 P A A1077 105.117 -69.100 19.109 1.00 42.66 P
ATOM 3 OP1 A A1077 105.098 -70.512 19.551 1.00 44.63 O
ATOM 4 OP2 A A1077 106.123 -68.672 18.104 1.00 28.35 O
ATOM 5 O5' A A1077 103.680 -68.699 18.625 1.00 63.65 O
ATOM 6 C5' A A1077 103.162 -67.410 18.864 1.00 53.01 C
ATOM 7 C4' A A1077 101.754 -67.321 18.377 1.00 48.96 C
ATOM 8 O4' A A1077 101.333 -65.943 18.395 1.00 46.33 O
ATOM 9 C3' A A1077 101.541 -67.817 16.960 1.00 46.44 C
ATOM 10 O3' A A1077 100.278 -68.450 16.881 1.00 53.26 O
ATOM 11 C2' A A1077 101.513 -66.531 16.148 1.00 46.99 C
ATOM 12 O2' A A1077 100.769 -66.628 14.953 1.00 53.30 O
ATOM 13 C1' A A1077 100.867 -65.567 17.130 1.00 40.23 C
ATOM 14 N9 A A1077 101.222 -64.170 16.934 1.00 35.71 N
ATOM 15 C8 A A1077 101.861 -63.547 15.903 1.00 38.09 C
ATOM 16 N7 A A1077 101.988 -62.256 16.105 1.00 37.93 N
ATOM 17 C5 A A1077 101.403 -62.036 17.342 1.00 32.71 C
ATOM 18 C6 A A1077 101.235 -60.891 18.118 1.00 34.30 C
ATOM 19 N6 A A1077 101.661 -59.684 17.720 1.00 38.06 N
ATOM 20 N1 A A1077 100.607 -61.023 19.309 1.00 34.50 N
ATOM 21 C2 A A1077 100.199 -62.233 19.691 1.00 33.68 C
ATOM 22 N3 A A1077 100.308 -63.380 19.043 1.00 32.62 N
ATOM 23 C4 A A1077 100.926 -63.205 17.863 1.00 34.05 C
ATOM 24 P A A1078 100.057 -69.724 15.937 1.00 68.25 P
ATOM 25 OP1 A A1078 100.385 -70.917 16.748 1.00 65.75 O
ATOM 26 OP2 A A1078 100.807 -69.489 14.667 1.00 65.62 O
ATOM 27 O5' A A1078 98.491 -69.665 15.650 1.00 62.79 O
TER
ATOM 1 O3' G B2319 104.323 -64.344 13.524 1.00 46.67 O
ATOM 2 P G B2320 103.670 -65.115 12.252 1.00 38.98 P
ATOM 3 OP1 G B2320 102.713 -66.100 12.788 1.00 37.09 O
ATOM 4 OP2 G B2320 104.784 -65.595 11.391 1.00 44.23 O
ATOM 5 O5' G B2320 102.891 -63.961 11.518 1.00 38.85 O
ATOM 6 C5' G B2320 102.113 -63.046 12.256 1.00 37.47 C
ATOM 7 C4' G B2320 101.822 -61.819 11.453 1.00 37.76 C
ATOM 8 O4' G B2320 103.064 -61.167 11.126 1.00 45.81 O
ATOM 9 C3' G B2320 101.120 -62.071 10.141 1.00 41.88 C
ATOM 10 O3' G B2320 100.264 -60.994 9.877 1.00 55.96 O
ATOM 11 C2' G B2320 102.245 -62.064 9.129 1.00 45.49 C
ATOM 12 O2' G B2320 101.845 -61.698 7.822 1.00 50.50 O
ATOM 13 C1' G B2320 103.204 -61.048 9.730 1.00 45.61 C
ATOM 14 N9 G B2320 104.610 -61.305 9.406 1.00 47.21 N
ATOM 15 C8 G B2320 105.197 -62.545 9.495 1.00 48.18 C
ATOM 16 N7 G B2320 106.454 -62.528 9.163 1.00 52.51 N
ATOM 17 C5 G B2320 106.711 -61.198 8.846 1.00 45.90 C
ATOM 18 C6 G B2320 107.911 -60.583 8.422 1.00 46.13 C
ATOM 19 O6 G B2320 109.008 -61.101 8.231 1.00 57.50 O
ATOM 20 N1 G B2320 107.757 -59.229 8.211 1.00 44.57 N
ATOM 21 C2 G B2320 106.592 -58.541 8.394 1.00 40.19 C
ATOM 22 N2 G B2320 106.647 -57.226 8.146 1.00 37.10 N
ATOM 23 N3 G B2320 105.471 -59.101 8.794 1.00 38.07 N
ATOM 24 C4 G B2320 105.590 -60.425 8.992 1.00 39.12 C
ATOM 25 P U B2321 98.693 -61.217 9.852 1.00 42.81 P
ATOM 26 OP1 U B2321 98.400 -62.431 10.641 1.00 63.61 O
ATOM 27 OP2 U B2321 98.275 -61.173 8.416 1.00 65.01 O
ATOM 28 O5' U B2321 98.181 -59.943 10.617 1.00 44.04 O
TER
Atoms:
OP1: (105.098,-70.512,19.551)
OP2: (106.123,-68.672,18.104)
C3': (101.541,-67.817,16.960)
C1': (100.867,-65.567,17.130)
C5': (103.162,-67.410,18.864)
O4': (101.333,-65.943,18.395)
C8: (101.861,-63.547,15.903)
O2': (100.769,-66.628,14.953)
C6: (101.235,-60.891,18.118)
C5: (101.403,-62.036,17.342)
C4: (100.926,-63.205,17.863)
P: (105.117,-69.100,19.109)
C4': (101.754,-67.321,18.377)
C2': (101.513,-66.531,16.148)
C2: (100.199,-62.233,19.691)
N1: (100.607,-61.023,19.309)
N3: (100.308,-63.380,19.043)
N6: (101.661,-59.684,17.720)
N7: (101.988,-62.256,16.105)
N9: (101.222,-64.170,16.934)
O5': (103.680,-68.699,18.625)
O3': (100.278,-68.450,16.881)
OP2: (106.123,-68.672,18.104)
C3': (101.541,-67.817,16.960)
C1': (100.867,-65.567,17.130)
C5': (103.162,-67.410,18.864)
O4': (101.333,-65.943,18.395)
C8: (101.861,-63.547,15.903)
O2': (100.769,-66.628,14.953)
C6: (101.235,-60.891,18.118)
C5: (101.403,-62.036,17.342)
C4: (100.926,-63.205,17.863)
P: (105.117,-69.100,19.109)
C4': (101.754,-67.321,18.377)
C2': (101.513,-66.531,16.148)
C2: (100.199,-62.233,19.691)
N1: (100.607,-61.023,19.309)
N3: (100.308,-63.380,19.043)
N6: (101.661,-59.684,17.720)
N7: (101.988,-62.256,16.105)
N9: (101.222,-64.170,16.934)
O5': (103.680,-68.699,18.625)
O3': (100.278,-68.450,16.881)
OP1: (102.713,-66.100,12.788)
OP2: (104.784,-65.595,11.391)
C3': (101.120,-62.071,10.141)
C1': (103.204,-61.048,9.730)
C5': (102.113,-63.046,12.256)
O6: (109.008,-61.101,8.231)
O4': (103.064,-61.167,11.126)
C8: (105.197,-62.545,9.495)
C2: (106.592,-58.541,8.394)
C6: (107.911,-60.583,8.422)
C5: (106.711,-61.198,8.846)
C4: (105.590,-60.425,8.992)
P: (103.670,-65.115,12.252)
C4': (101.822,-61.819,11.453)
C2': (102.245,-62.064,9.129)
O2': (101.845,-61.698,7.822)
N1: (107.757,-59.229,8.211)
N2: (106.647,-57.226,8.146)
N3: (105.471,-59.101,8.794)
N7: (106.454,-62.528,9.163)
N9: (104.610,-61.305,9.406)
O5': (102.891,-63.961,11.518)
O3': (100.264,-60.994,9.877)
OP2: (104.784,-65.595,11.391)
C3': (101.120,-62.071,10.141)
C1': (103.204,-61.048,9.730)
C5': (102.113,-63.046,12.256)
O6: (109.008,-61.101,8.231)
O4': (103.064,-61.167,11.126)
C8: (105.197,-62.545,9.495)
C2: (106.592,-58.541,8.394)
C6: (107.911,-60.583,8.422)
C5: (106.711,-61.198,8.846)
C4: (105.590,-60.425,8.992)
P: (103.670,-65.115,12.252)
C4': (101.822,-61.819,11.453)
C2': (102.245,-62.064,9.129)
O2': (101.845,-61.698,7.822)
N1: (107.757,-59.229,8.211)
N2: (106.647,-57.226,8.146)
N3: (105.471,-59.101,8.794)
N7: (106.454,-62.528,9.163)
N9: (104.610,-61.305,9.406)
O5': (102.891,-63.961,11.518)
O3': (100.264,-60.994,9.877)
Image (generated by PyMOL):