Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AM1:B10:B54
Extra
PDB:
ATOM 1 O3' U A 9 5.918 6.174 24.369 1.00 46.87 O
ATOM 2 P A A 10 4.813 7.284 24.719 1.00 84.92 P
ATOM 3 OP1 A A 10 5.410 8.258 25.686 1.00 68.69 O
ATOM 4 OP2 A A 10 3.661 6.432 25.103 1.00 80.20 O
ATOM 5 O5' A A 10 4.493 7.986 23.318 1.00 59.70 O
ATOM 6 C5' A A 10 3.287 8.710 23.078 1.00 54.63 C
ATOM 7 C4' A A 10 2.841 8.506 21.655 1.00 63.84 C
ATOM 8 O4' A A 10 3.902 8.964 20.775 1.00 67.96 O
ATOM 9 C3' A A 10 2.612 7.046 21.291 1.00 63.43 C
ATOM 10 O3' A A 10 1.647 6.968 20.249 1.00 67.87 O
ATOM 11 C2' A A 10 3.966 6.608 20.757 1.00 60.13 C
ATOM 12 O2' A A 10 3.900 5.516 19.864 1.00 57.17 O
ATOM 13 C1' A A 10 4.475 7.875 20.076 1.00 63.54 C
ATOM 14 N9 A A 10 5.932 8.031 20.165 1.00 63.67 N
ATOM 15 C8 A A 10 6.640 9.011 20.829 1.00 56.88 C
ATOM 16 N7 A A 10 7.944 8.892 20.736 1.00 48.41 N
ATOM 17 C5 A A 10 8.107 7.758 19.952 1.00 48.07 C
ATOM 18 C6 A A 10 9.248 7.087 19.485 1.00 50.50 C
ATOM 19 N6 A A 10 10.501 7.476 19.734 1.00 55.72 N
ATOM 20 N1 A A 10 9.065 5.977 18.740 1.00 51.62 N
ATOM 21 C2 A A 10 7.819 5.576 18.481 1.00 48.81 C
ATOM 22 N3 A A 10 6.671 6.120 18.860 1.00 50.93 N
ATOM 23 C4 A A 10 6.884 7.218 19.599 1.00 51.48 C
ATOM 24 P C A 11 0.092 6.807 20.614 1.00 88.79 P
ATOM 25 OP1 C A 11 -0.066 5.782 21.676 1.00 80.58 O
ATOM 26 OP2 C A 11 -0.536 6.572 19.300 1.00 85.83 O
ATOM 27 O5' C A 11 -0.304 8.249 21.151 1.00 66.26 O
TER
ATOM 1 O3' U B 53 17.156 9.136 17.185 1.00 61.19 O
ATOM 2 P C B 54 16.668 8.272 18.457 1.00 75.16 P
ATOM 3 OP1 C B 54 17.975 8.099 19.134 1.00 77.27 O
ATOM 4 OP2 C B 54 15.864 7.061 18.139 1.00 59.90 O
ATOM 5 O5' C B 54 15.697 9.287 19.213 1.00 60.11 O
ATOM 6 C5' C B 54 16.112 10.415 19.973 1.00 63.85 C
ATOM 7 C4' C B 54 14.910 11.088 20.584 1.00 62.90 C
ATOM 8 O4' C B 54 13.967 11.392 19.513 1.00 58.81 O
ATOM 9 C3' C B 54 14.148 10.249 21.617 1.00 60.74 C
ATOM 10 O3' C B 54 13.668 11.048 22.702 1.00 59.65 O
ATOM 11 C2' C B 54 12.949 9.744 20.824 1.00 66.56 C
ATOM 12 O2' C B 54 11.788 9.484 21.587 1.00 78.15 O
ATOM 13 C1' C B 54 12.694 10.877 19.839 1.00 55.71 C
ATOM 14 N1 C B 54 11.949 10.208 18.759 1.00 60.84 N
ATOM 15 C2 C B 54 10.628 10.602 18.577 1.00 61.72 C
ATOM 16 O2 C B 54 10.197 11.518 19.283 1.00 69.55 O
ATOM 17 N3 C B 54 9.878 9.996 17.636 1.00 54.24 N
ATOM 18 C4 C B 54 10.404 9.005 16.911 1.00 54.61 C
ATOM 19 N4 C B 54 9.609 8.430 16.010 1.00 56.53 N
ATOM 20 C5 C B 54 11.750 8.557 17.079 1.00 49.50 C
ATOM 21 C6 C B 54 12.477 9.176 18.021 1.00 59.89 C
ATOM 22 P G B 55 14.531 11.230 24.038 1.00 67.59 P
ATOM 23 OP1 G B 55 14.964 9.932 24.607 1.00 55.42 O
ATOM 24 OP2 G B 55 13.722 12.177 24.841 1.00 67.19 O
ATOM 25 O5' G B 55 15.799 11.952 23.429 1.00 85.67 O
TER
ATOM 2 P A A 10 4.813 7.284 24.719 1.00 84.92 P
ATOM 3 OP1 A A 10 5.410 8.258 25.686 1.00 68.69 O
ATOM 4 OP2 A A 10 3.661 6.432 25.103 1.00 80.20 O
ATOM 5 O5' A A 10 4.493 7.986 23.318 1.00 59.70 O
ATOM 6 C5' A A 10 3.287 8.710 23.078 1.00 54.63 C
ATOM 7 C4' A A 10 2.841 8.506 21.655 1.00 63.84 C
ATOM 8 O4' A A 10 3.902 8.964 20.775 1.00 67.96 O
ATOM 9 C3' A A 10 2.612 7.046 21.291 1.00 63.43 C
ATOM 10 O3' A A 10 1.647 6.968 20.249 1.00 67.87 O
ATOM 11 C2' A A 10 3.966 6.608 20.757 1.00 60.13 C
ATOM 12 O2' A A 10 3.900 5.516 19.864 1.00 57.17 O
ATOM 13 C1' A A 10 4.475 7.875 20.076 1.00 63.54 C
ATOM 14 N9 A A 10 5.932 8.031 20.165 1.00 63.67 N
ATOM 15 C8 A A 10 6.640 9.011 20.829 1.00 56.88 C
ATOM 16 N7 A A 10 7.944 8.892 20.736 1.00 48.41 N
ATOM 17 C5 A A 10 8.107 7.758 19.952 1.00 48.07 C
ATOM 18 C6 A A 10 9.248 7.087 19.485 1.00 50.50 C
ATOM 19 N6 A A 10 10.501 7.476 19.734 1.00 55.72 N
ATOM 20 N1 A A 10 9.065 5.977 18.740 1.00 51.62 N
ATOM 21 C2 A A 10 7.819 5.576 18.481 1.00 48.81 C
ATOM 22 N3 A A 10 6.671 6.120 18.860 1.00 50.93 N
ATOM 23 C4 A A 10 6.884 7.218 19.599 1.00 51.48 C
ATOM 24 P C A 11 0.092 6.807 20.614 1.00 88.79 P
ATOM 25 OP1 C A 11 -0.066 5.782 21.676 1.00 80.58 O
ATOM 26 OP2 C A 11 -0.536 6.572 19.300 1.00 85.83 O
ATOM 27 O5' C A 11 -0.304 8.249 21.151 1.00 66.26 O
TER
ATOM 1 O3' U B 53 17.156 9.136 17.185 1.00 61.19 O
ATOM 2 P C B 54 16.668 8.272 18.457 1.00 75.16 P
ATOM 3 OP1 C B 54 17.975 8.099 19.134 1.00 77.27 O
ATOM 4 OP2 C B 54 15.864 7.061 18.139 1.00 59.90 O
ATOM 5 O5' C B 54 15.697 9.287 19.213 1.00 60.11 O
ATOM 6 C5' C B 54 16.112 10.415 19.973 1.00 63.85 C
ATOM 7 C4' C B 54 14.910 11.088 20.584 1.00 62.90 C
ATOM 8 O4' C B 54 13.967 11.392 19.513 1.00 58.81 O
ATOM 9 C3' C B 54 14.148 10.249 21.617 1.00 60.74 C
ATOM 10 O3' C B 54 13.668 11.048 22.702 1.00 59.65 O
ATOM 11 C2' C B 54 12.949 9.744 20.824 1.00 66.56 C
ATOM 12 O2' C B 54 11.788 9.484 21.587 1.00 78.15 O
ATOM 13 C1' C B 54 12.694 10.877 19.839 1.00 55.71 C
ATOM 14 N1 C B 54 11.949 10.208 18.759 1.00 60.84 N
ATOM 15 C2 C B 54 10.628 10.602 18.577 1.00 61.72 C
ATOM 16 O2 C B 54 10.197 11.518 19.283 1.00 69.55 O
ATOM 17 N3 C B 54 9.878 9.996 17.636 1.00 54.24 N
ATOM 18 C4 C B 54 10.404 9.005 16.911 1.00 54.61 C
ATOM 19 N4 C B 54 9.609 8.430 16.010 1.00 56.53 N
ATOM 20 C5 C B 54 11.750 8.557 17.079 1.00 49.50 C
ATOM 21 C6 C B 54 12.477 9.176 18.021 1.00 59.89 C
ATOM 22 P G B 55 14.531 11.230 24.038 1.00 67.59 P
ATOM 23 OP1 G B 55 14.964 9.932 24.607 1.00 55.42 O
ATOM 24 OP2 G B 55 13.722 12.177 24.841 1.00 67.19 O
ATOM 25 O5' G B 55 15.799 11.952 23.429 1.00 85.67 O
TER
Atoms:
OP1: (5.410,8.258,25.686)
OP2: (3.661,6.432,25.103)
C3': (2.612,7.046,21.291)
C1': (4.475,7.875,20.076)
C5': (3.287,8.710,23.078)
O4': (3.902,8.964,20.775)
C8: (6.640,9.011,20.829)
O2': (3.900,5.516,19.864)
C6: (9.248,7.087,19.485)
C5: (8.107,7.758,19.952)
C4: (6.884,7.218,19.599)
P: (4.813,7.284,24.719)
C4': (2.841,8.506,21.655)
C2': (3.966,6.608,20.757)
C2: (7.819,5.576,18.481)
N1: (9.065,5.977,18.740)
N3: (6.671,6.120,18.860)
N6: (10.501,7.476,19.734)
N7: (7.944,8.892,20.736)
N9: (5.932,8.031,20.165)
O5': (4.493,7.986,23.318)
O3': (1.647,6.968,20.249)
OP2: (3.661,6.432,25.103)
C3': (2.612,7.046,21.291)
C1': (4.475,7.875,20.076)
C5': (3.287,8.710,23.078)
O4': (3.902,8.964,20.775)
C8: (6.640,9.011,20.829)
O2': (3.900,5.516,19.864)
C6: (9.248,7.087,19.485)
C5: (8.107,7.758,19.952)
C4: (6.884,7.218,19.599)
P: (4.813,7.284,24.719)
C4': (2.841,8.506,21.655)
C2': (3.966,6.608,20.757)
C2: (7.819,5.576,18.481)
N1: (9.065,5.977,18.740)
N3: (6.671,6.120,18.860)
N6: (10.501,7.476,19.734)
N7: (7.944,8.892,20.736)
N9: (5.932,8.031,20.165)
O5': (4.493,7.986,23.318)
O3': (1.647,6.968,20.249)
C2: (10.628,10.602,18.577)
OP1: (17.975,8.099,19.134)
OP2: (15.864,7.061,18.139)
C4: (10.404,9.005,16.911)
O5': (15.697,9.287,19.213)
C3': (14.148,10.249,21.617)
C1': (12.694,10.877,19.839)
O4': (13.967,11.392,19.513)
C5': (16.112,10.415,19.973)
P: (16.668,8.272,18.457)
O2: (10.197,11.518,19.283)
C4': (14.910,11.088,20.584)
C2': (12.949,9.744,20.824)
O2': (11.788,9.484,21.587)
N1: (11.949,10.208,18.759)
N3: (9.878,9.996,17.636)
N4: (9.609,8.430,16.010)
C6: (12.477,9.176,18.021)
C5: (11.750,8.557,17.079)
O3': (13.668,11.048,22.702)
OP1: (17.975,8.099,19.134)
OP2: (15.864,7.061,18.139)
C4: (10.404,9.005,16.911)
O5': (15.697,9.287,19.213)
C3': (14.148,10.249,21.617)
C1': (12.694,10.877,19.839)
O4': (13.967,11.392,19.513)
C5': (16.112,10.415,19.973)
P: (16.668,8.272,18.457)
O2: (10.197,11.518,19.283)
C4': (14.910,11.088,20.584)
C2': (12.949,9.744,20.824)
O2': (11.788,9.484,21.587)
N1: (11.949,10.208,18.759)
N3: (9.878,9.996,17.636)
N4: (9.609,8.430,16.010)
C6: (12.477,9.176,18.021)
C5: (11.750,8.557,17.079)
O3': (13.668,11.048,22.702)
Image (generated by PyMOL):