ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A622:A558

Extra

PDB:
ATOM 1 O3' U A 621 35.368 57.033 12.903 1.00 78.65 O
ATOM 2 P A A 622 36.517 56.563 11.879 1.00 85.94 P
ATOM 3 OP1 A A 622 36.806 57.717 10.987 1.00 91.22 O
ATOM 4 OP2 A A 622 36.087 55.273 11.282 1.00 96.04 O
ATOM 5 O5' A A 622 37.806 56.344 12.798 1.00 88.73 O
ATOM 6 C5' A A 622 38.509 55.091 12.885 1.00 82.44 C
ATOM 7 C4' A A 622 39.893 55.325 13.457 1.00 83.61 C
ATOM 8 O4' A A 622 39.829 56.103 14.687 1.00 84.02 O
ATOM 9 C3' A A 622 40.796 54.131 13.740 1.00 84.86 C
ATOM 10 O3' A A 622 42.047 54.316 13.087 1.00 90.94 O
ATOM 11 C2' A A 622 40.961 54.145 15.264 1.00 83.50 C
ATOM 12 O2' A A 622 42.247 53.736 15.685 1.00 83.91 O
ATOM 13 C1' A A 622 40.796 55.627 15.595 1.00 84.97 C
ATOM 14 N9 A A 622 40.363 55.882 16.977 1.00 89.05 N
ATOM 15 C8 A A 622 41.060 55.567 18.124 1.00 91.75 C
ATOM 16 N7 A A 622 40.429 55.879 19.231 1.00 91.16 N
ATOM 17 C5 A A 622 39.238 56.445 18.787 1.00 88.67 C
ATOM 18 C6 A A 622 38.118 56.972 19.471 1.00 85.25 C
ATOM 19 N6 A A 622 38.003 57.004 20.801 1.00 91.46 N
ATOM 20 N1 A A 622 37.105 57.467 18.729 1.00 80.82 N
ATOM 21 C2 A A 622 37.210 57.430 17.403 1.00 83.96 C
ATOM 22 N3 A A 622 38.198 56.958 16.647 1.00 85.63 N
ATOM 23 C4 A A 622 39.192 56.468 17.405 1.00 86.58 C
ATOM 24 P G A 623 42.574 53.201 12.051 1.00 98.00 P
ATOM 25 OP1 G A 623 43.905 53.578 11.495 1.00 90.16 O
ATOM 26 OP2 G A 623 41.443 52.911 11.116 1.00 87.92 O
ATOM 27 O5' G A 623 42.757 51.909 12.976 1.00 92.78 O
TER

ATOM 1 O3' G B 557 42.263 51.841 24.489 1.00 80.79 O
ATOM 2 P C B 558 41.533 52.477 25.781 1.00 85.62 P
ATOM 3 OP1 C B 558 42.549 53.246 26.549 1.00 86.70 O
ATOM 4 OP2 C B 558 40.741 51.423 26.473 1.00 78.48 O
ATOM 5 O5' C B 558 40.471 53.493 25.160 1.00 95.72 O
ATOM 6 C5' C B 558 40.836 54.833 24.800 1.00 95.34 C
ATOM 7 C4' C B 558 39.608 55.618 24.388 1.00 93.66 C
ATOM 8 O4' C B 558 39.083 55.034 23.162 1.00 90.76 O
ATOM 9 C3' C B 558 38.442 55.561 25.371 1.00 92.42 C
ATOM 10 O3' C B 558 38.499 56.520 26.424 1.00 92.29 O
ATOM 11 C2' C B 558 37.233 55.758 24.468 1.00 89.83 C
ATOM 12 O2' C B 558 36.971 57.114 24.175 1.00 79.11 O
ATOM 13 C1' C B 558 37.667 55.003 23.211 1.00 93.05 C
ATOM 14 N1 C B 558 37.222 53.589 23.282 1.00 92.83 N
ATOM 15 C2 C B 558 35.942 53.242 22.781 1.00 95.51 C
ATOM 16 O2 C B 558 35.251 54.108 22.204 1.00 97.19 O
ATOM 17 N3 C B 558 35.498 51.972 22.936 1.00 92.03 N
ATOM 18 C4 C B 558 36.267 51.064 23.537 1.00 88.16 C
ATOM 19 N4 C B 558 35.764 49.836 23.699 1.00 86.03 N
ATOM 20 C5 C B 558 37.579 51.375 24.006 1.00 84.98 C
ATOM 21 C6 C B 558 38.012 52.632 23.858 1.00 84.41 C
ATOM 22 P C B 559 37.744 56.220 27.824 1.00 93.57 P
ATOM 23 OP1 C B 559 38.101 57.343 28.714 1.00 95.94 O
ATOM 24 OP2 C B 559 38.038 54.825 28.257 1.00 86.07 O
ATOM 25 O5' C B 559 36.185 56.341 27.479 1.00 88.50 O
TER

Atoms:
OP1: (36.806,57.717,10.987)
OP2: (36.087,55.273,11.282)
C3': (40.796,54.131,13.740)
C1': (40.796,55.627,15.595)
C5': (38.509,55.091,12.885)
O4': (39.829,56.103,14.687)
C8: (41.060,55.567,18.124)
O2': (42.247,53.736,15.685)
C6: (38.118,56.972,19.471)
C5: (39.238,56.445,18.787)
C4: (39.192,56.468,17.405)
P: (36.517,56.563,11.879)
C4': (39.893,55.325,13.457)
C2': (40.961,54.145,15.264)
C2: (37.210,57.430,17.403)
N1: (37.105,57.467,18.729)
N3: (38.198,56.958,16.647)
N6: (38.003,57.004,20.801)
N7: (40.429,55.879,19.231)
N9: (40.363,55.882,16.977)
O5': (37.806,56.344,12.798)
O3': (42.047,54.316,13.087)
C2: (35.942,53.242,22.781)
OP1: (42.549,53.246,26.549)
OP2: (40.741,51.423,26.473)
C4: (36.267,51.064,23.537)
O5': (40.471,53.493,25.160)
C3': (38.442,55.561,25.371)
C1': (37.667,55.003,23.211)
O4': (39.083,55.034,23.162)
C5': (40.836,54.833,24.800)
P: (41.533,52.477,25.781)
O2: (35.251,54.108,22.204)
C4': (39.608,55.618,24.388)
C2': (37.233,55.758,24.468)
O2': (36.971,57.114,24.175)
N1: (37.222,53.589,23.282)
N3: (35.498,51.972,22.936)
N4: (35.764,49.836,23.699)
C6: (38.012,52.632,23.858)
C5: (37.579,51.375,24.006)
O3': (38.499,56.520,26.424)
Image (generated by PyMOL):
PyMOL image
show in jmol