Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OIJ:C8:C6
Extra
PDB:
ATOM 1 O3' A A 7 9.697 -15.988 14.073 1.00 44.15 O
ATOM 2 P A A 8 10.210 -17.283 13.303 1.00 72.11 P
ATOM 3 OP1 A A 8 9.217 -18.370 13.529 1.00 45.44 O
ATOM 4 OP2 A A 8 11.595 -17.410 13.813 1.00 63.01 O
ATOM 5 O5' A A 8 10.287 -16.882 11.757 1.00 56.90 O
ATOM 6 C5' A A 8 9.179 -16.806 10.870 1.00 55.27 C
ATOM 7 C4' A A 8 9.289 -15.588 9.987 1.00 66.63 C
ATOM 8 O4' A A 8 9.586 -14.427 10.810 1.00 72.42 O
ATOM 9 C3' A A 8 10.425 -15.606 8.977 1.00 64.06 C
ATOM 10 O3' A A 8 10.122 -16.358 7.808 1.00 53.98 O
ATOM 11 C2' A A 8 10.716 -14.118 8.750 1.00 61.66 C
ATOM 12 O2' A A 8 9.763 -13.498 7.901 1.00 62.02 O
ATOM 13 C1' A A 8 10.470 -13.547 10.139 1.00 59.62 C
ATOM 14 N9 A A 8 11.722 -13.387 10.905 1.00 54.83 N
ATOM 15 C8 A A 8 12.648 -14.336 11.261 1.00 48.73 C
ATOM 16 N7 A A 8 13.659 -13.842 11.945 1.00 47.94 N
ATOM 17 C5 A A 8 13.394 -12.482 12.054 1.00 54.13 C
ATOM 18 C6 A A 8 14.077 -11.388 12.658 1.00 58.16 C
ATOM 19 N6 A A 8 15.237 -11.465 13.327 1.00 56.60 N
ATOM 20 N1 A A 8 13.513 -10.160 12.560 1.00 53.79 N
ATOM 21 C2 A A 8 12.350 -10.045 11.909 1.00 52.22 C
ATOM 22 N3 A A 8 11.622 -10.986 11.309 1.00 53.59 N
ATOM 23 C4 A A 8 12.198 -12.196 11.415 1.00 55.36 C
ATOM 24 P C A 9 11.079 -17.590 7.401 1.00 85.04 P
ATOM 25 OP1 C A 9 10.631 -18.073 6.073 1.00 84.69 O
ATOM 26 OP2 C A 9 11.080 -18.540 8.543 1.00 84.32 O
ATOM 27 O5' C A 9 12.516 -16.906 7.291 1.00 75.65 O
TER
ATOM 1 O3' U B 5 19.640 -11.713 20.109 1.00 49.22 O
ATOM 2 P C B 6 18.535 -10.870 19.331 1.00 54.61 P
ATOM 3 OP1 C B 6 19.091 -9.493 19.256 1.00 53.78 O
ATOM 4 OP2 C B 6 17.221 -11.064 20.013 1.00 64.72 O
ATOM 5 O5' C B 6 18.562 -11.629 17.920 1.00 42.94 O
ATOM 6 C5' C B 6 17.769 -11.130 16.852 1.00 52.28 C
ATOM 7 C4' C B 6 17.616 -12.092 15.703 1.00 49.67 C
ATOM 8 O4' C B 6 18.898 -12.324 15.083 1.00 46.21 O
ATOM 9 C3' C B 6 17.082 -13.481 16.021 1.00 55.00 C
ATOM 10 O3' C B 6 15.666 -13.497 16.080 1.00 57.39 O
ATOM 11 C2' C B 6 17.638 -14.343 14.891 1.00 52.54 C
ATOM 12 O2' C B 6 16.794 -14.280 13.751 1.00 49.52 O
ATOM 13 C1' C B 6 18.951 -13.637 14.557 1.00 54.73 C
ATOM 14 N1 C B 6 20.157 -14.242 15.138 1.00 59.22 N
ATOM 15 C2 C B 6 21.343 -14.185 14.395 1.00 53.53 C
ATOM 16 O2 C B 6 21.333 -13.663 13.272 1.00 43.69 O
ATOM 17 N3 C B 6 22.471 -14.705 14.921 1.00 58.46 N
ATOM 18 C4 C B 6 22.439 -15.257 16.140 1.00 63.92 C
ATOM 19 N4 C B 6 23.576 -15.769 16.627 1.00 60.85 N
ATOM 20 C5 C B 6 21.240 -15.320 16.918 1.00 64.58 C
ATOM 21 C6 C B 6 20.129 -14.800 16.385 1.00 64.03 C
ATOM 22 P A B 7 14.861 -14.698 16.772 1.00 61.69 P
ATOM 23 OP1 A B 7 15.296 -14.763 18.196 1.00 74.92 O
ATOM 24 OP2 A B 7 15.008 -15.896 15.907 1.00 62.02 O
ATOM 25 O5' A B 7 13.379 -14.181 16.592 1.00 60.99 O
TER
ATOM 2 P A A 8 10.210 -17.283 13.303 1.00 72.11 P
ATOM 3 OP1 A A 8 9.217 -18.370 13.529 1.00 45.44 O
ATOM 4 OP2 A A 8 11.595 -17.410 13.813 1.00 63.01 O
ATOM 5 O5' A A 8 10.287 -16.882 11.757 1.00 56.90 O
ATOM 6 C5' A A 8 9.179 -16.806 10.870 1.00 55.27 C
ATOM 7 C4' A A 8 9.289 -15.588 9.987 1.00 66.63 C
ATOM 8 O4' A A 8 9.586 -14.427 10.810 1.00 72.42 O
ATOM 9 C3' A A 8 10.425 -15.606 8.977 1.00 64.06 C
ATOM 10 O3' A A 8 10.122 -16.358 7.808 1.00 53.98 O
ATOM 11 C2' A A 8 10.716 -14.118 8.750 1.00 61.66 C
ATOM 12 O2' A A 8 9.763 -13.498 7.901 1.00 62.02 O
ATOM 13 C1' A A 8 10.470 -13.547 10.139 1.00 59.62 C
ATOM 14 N9 A A 8 11.722 -13.387 10.905 1.00 54.83 N
ATOM 15 C8 A A 8 12.648 -14.336 11.261 1.00 48.73 C
ATOM 16 N7 A A 8 13.659 -13.842 11.945 1.00 47.94 N
ATOM 17 C5 A A 8 13.394 -12.482 12.054 1.00 54.13 C
ATOM 18 C6 A A 8 14.077 -11.388 12.658 1.00 58.16 C
ATOM 19 N6 A A 8 15.237 -11.465 13.327 1.00 56.60 N
ATOM 20 N1 A A 8 13.513 -10.160 12.560 1.00 53.79 N
ATOM 21 C2 A A 8 12.350 -10.045 11.909 1.00 52.22 C
ATOM 22 N3 A A 8 11.622 -10.986 11.309 1.00 53.59 N
ATOM 23 C4 A A 8 12.198 -12.196 11.415 1.00 55.36 C
ATOM 24 P C A 9 11.079 -17.590 7.401 1.00 85.04 P
ATOM 25 OP1 C A 9 10.631 -18.073 6.073 1.00 84.69 O
ATOM 26 OP2 C A 9 11.080 -18.540 8.543 1.00 84.32 O
ATOM 27 O5' C A 9 12.516 -16.906 7.291 1.00 75.65 O
TER
ATOM 1 O3' U B 5 19.640 -11.713 20.109 1.00 49.22 O
ATOM 2 P C B 6 18.535 -10.870 19.331 1.00 54.61 P
ATOM 3 OP1 C B 6 19.091 -9.493 19.256 1.00 53.78 O
ATOM 4 OP2 C B 6 17.221 -11.064 20.013 1.00 64.72 O
ATOM 5 O5' C B 6 18.562 -11.629 17.920 1.00 42.94 O
ATOM 6 C5' C B 6 17.769 -11.130 16.852 1.00 52.28 C
ATOM 7 C4' C B 6 17.616 -12.092 15.703 1.00 49.67 C
ATOM 8 O4' C B 6 18.898 -12.324 15.083 1.00 46.21 O
ATOM 9 C3' C B 6 17.082 -13.481 16.021 1.00 55.00 C
ATOM 10 O3' C B 6 15.666 -13.497 16.080 1.00 57.39 O
ATOM 11 C2' C B 6 17.638 -14.343 14.891 1.00 52.54 C
ATOM 12 O2' C B 6 16.794 -14.280 13.751 1.00 49.52 O
ATOM 13 C1' C B 6 18.951 -13.637 14.557 1.00 54.73 C
ATOM 14 N1 C B 6 20.157 -14.242 15.138 1.00 59.22 N
ATOM 15 C2 C B 6 21.343 -14.185 14.395 1.00 53.53 C
ATOM 16 O2 C B 6 21.333 -13.663 13.272 1.00 43.69 O
ATOM 17 N3 C B 6 22.471 -14.705 14.921 1.00 58.46 N
ATOM 18 C4 C B 6 22.439 -15.257 16.140 1.00 63.92 C
ATOM 19 N4 C B 6 23.576 -15.769 16.627 1.00 60.85 N
ATOM 20 C5 C B 6 21.240 -15.320 16.918 1.00 64.58 C
ATOM 21 C6 C B 6 20.129 -14.800 16.385 1.00 64.03 C
ATOM 22 P A B 7 14.861 -14.698 16.772 1.00 61.69 P
ATOM 23 OP1 A B 7 15.296 -14.763 18.196 1.00 74.92 O
ATOM 24 OP2 A B 7 15.008 -15.896 15.907 1.00 62.02 O
ATOM 25 O5' A B 7 13.379 -14.181 16.592 1.00 60.99 O
TER
Atoms:
OP1: (9.217,-18.370,13.529)
OP2: (11.595,-17.410,13.813)
C3': (10.425,-15.606,8.977)
C1': (10.470,-13.547,10.139)
C5': (9.179,-16.806,10.870)
O4': (9.586,-14.427,10.810)
C8: (12.648,-14.336,11.261)
O2': (9.763,-13.498,7.901)
C6: (14.077,-11.388,12.658)
C5: (13.394,-12.482,12.054)
C4: (12.198,-12.196,11.415)
P: (10.210,-17.283,13.303)
C4': (9.289,-15.588,9.987)
C2': (10.716,-14.118,8.750)
C2: (12.350,-10.045,11.909)
N1: (13.513,-10.160,12.560)
N3: (11.622,-10.986,11.309)
N6: (15.237,-11.465,13.327)
N7: (13.659,-13.842,11.945)
N9: (11.722,-13.387,10.905)
O5': (10.287,-16.882,11.757)
O3': (10.122,-16.358,7.808)
OP2: (11.595,-17.410,13.813)
C3': (10.425,-15.606,8.977)
C1': (10.470,-13.547,10.139)
C5': (9.179,-16.806,10.870)
O4': (9.586,-14.427,10.810)
C8: (12.648,-14.336,11.261)
O2': (9.763,-13.498,7.901)
C6: (14.077,-11.388,12.658)
C5: (13.394,-12.482,12.054)
C4: (12.198,-12.196,11.415)
P: (10.210,-17.283,13.303)
C4': (9.289,-15.588,9.987)
C2': (10.716,-14.118,8.750)
C2: (12.350,-10.045,11.909)
N1: (13.513,-10.160,12.560)
N3: (11.622,-10.986,11.309)
N6: (15.237,-11.465,13.327)
N7: (13.659,-13.842,11.945)
N9: (11.722,-13.387,10.905)
O5': (10.287,-16.882,11.757)
O3': (10.122,-16.358,7.808)
C2: (21.343,-14.185,14.395)
OP1: (19.091,-9.493,19.256)
OP2: (17.221,-11.064,20.013)
C4: (22.439,-15.257,16.140)
O5': (18.562,-11.629,17.920)
C3': (17.082,-13.481,16.021)
C1': (18.951,-13.637,14.557)
O4': (18.898,-12.324,15.083)
C5': (17.769,-11.130,16.852)
P: (18.535,-10.870,19.331)
O2: (21.333,-13.663,13.272)
C4': (17.616,-12.092,15.703)
C2': (17.638,-14.343,14.891)
O2': (16.794,-14.280,13.751)
N1: (20.157,-14.242,15.138)
N3: (22.471,-14.705,14.921)
N4: (23.576,-15.769,16.627)
C6: (20.129,-14.800,16.385)
C5: (21.240,-15.320,16.918)
O3': (15.666,-13.497,16.080)
OP1: (19.091,-9.493,19.256)
OP2: (17.221,-11.064,20.013)
C4: (22.439,-15.257,16.140)
O5': (18.562,-11.629,17.920)
C3': (17.082,-13.481,16.021)
C1': (18.951,-13.637,14.557)
O4': (18.898,-12.324,15.083)
C5': (17.769,-11.130,16.852)
P: (18.535,-10.870,19.331)
O2: (21.333,-13.663,13.272)
C4': (17.616,-12.092,15.703)
C2': (17.638,-14.343,14.891)
O2': (16.794,-14.280,13.751)
N1: (20.157,-14.242,15.138)
N3: (22.471,-14.705,14.921)
N4: (23.576,-15.769,16.627)
C6: (20.129,-14.800,16.385)
C5: (21.240,-15.320,16.918)
O3': (15.666,-13.497,16.080)
Image (generated by PyMOL):