Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OIN:C8:C6
Extra
PDB:
ATOM 1 O3' A A 7 -11.378 -4.119 8.387 1.00 47.66 O
ATOM 2 P A A 8 -11.485 -5.713 8.131 1.00 47.84 P
ATOM 3 OP1 A A 8 -12.892 -5.949 7.709 1.00 58.83 O
ATOM 4 OP2 A A 8 -10.922 -6.383 9.331 1.00 48.03 O
ATOM 5 O5' A A 8 -10.524 -5.979 6.896 1.00 50.29 O
ATOM 6 C5' A A 8 -10.899 -5.524 5.606 1.00 48.45 C
ATOM 7 C4' A A 8 -9.699 -5.009 4.851 1.00 54.64 C
ATOM 8 O4' A A 8 -9.122 -3.873 5.545 1.00 47.87 O
ATOM 9 C3' A A 8 -8.538 -5.978 4.712 1.00 57.84 C
ATOM 10 O3' A A 8 -8.741 -6.913 3.671 1.00 60.83 O
ATOM 11 C2' A A 8 -7.368 -5.038 4.458 1.00 51.92 C
ATOM 12 O2' A A 8 -7.418 -4.597 3.108 1.00 52.58 O
ATOM 13 C1' A A 8 -7.722 -3.851 5.357 1.00 43.62 C
ATOM 14 N9 A A 8 -7.042 -3.865 6.676 1.00 39.90 N
ATOM 15 C8 A A 8 -7.015 -4.863 7.621 1.00 45.83 C
ATOM 16 N7 A A 8 -6.315 -4.561 8.696 1.00 49.13 N
ATOM 17 C5 A A 8 -5.843 -3.275 8.432 1.00 40.49 C
ATOM 18 C6 A A 8 -5.039 -2.386 9.170 1.00 37.91 C
ATOM 19 N6 A A 8 -4.546 -2.686 10.382 1.00 34.09 N
ATOM 20 N1 A A 8 -4.752 -1.174 8.616 1.00 27.71 N
ATOM 21 C2 A A 8 -5.243 -0.892 7.407 1.00 26.81 C
ATOM 22 N3 A A 8 -6.008 -1.646 6.623 1.00 36.16 N
ATOM 23 C4 A A 8 -6.280 -2.840 7.196 1.00 36.61 C
ATOM 24 P C A 9 -8.617 -8.486 3.961 1.00 55.41 P
ATOM 25 OP1 C A 9 -8.732 -9.127 2.635 1.00 56.62 O
ATOM 26 OP2 C A 9 -9.572 -8.820 5.056 1.00 59.94 O
ATOM 27 O5' C A 9 -7.142 -8.672 4.518 1.00 65.89 O
TER
ATOM 1 O3' U B 5 -4.306 -2.115 18.503 1.00 31.53 O
ATOM 2 P C B 6 -4.258 -1.338 17.118 1.00 38.76 P
ATOM 3 OP1 C B 6 -2.992 -0.552 17.009 1.00 37.50 O
ATOM 4 OP2 C B 6 -5.555 -0.652 17.000 1.00 33.03 O
ATOM 5 O5' C B 6 -4.212 -2.543 16.086 1.00 45.06 O
ATOM 6 C5' C B 6 -4.051 -2.212 14.717 1.00 35.01 C
ATOM 7 C4' C B 6 -4.161 -3.424 13.832 1.00 37.09 C
ATOM 8 O4' C B 6 -3.140 -4.394 14.162 1.00 42.82 O
ATOM 9 C3' C B 6 -5.459 -4.204 13.907 1.00 40.15 C
ATOM 10 O3' C B 6 -6.492 -3.561 13.167 1.00 36.53 O
ATOM 11 C2' C B 6 -5.046 -5.574 13.362 1.00 47.43 C
ATOM 12 O2' C B 6 -5.035 -5.557 11.940 1.00 51.65 O
ATOM 13 C1' C B 6 -3.587 -5.692 13.827 1.00 47.23 C
ATOM 14 N1 C B 6 -3.225 -6.509 14.995 1.00 45.02 N
ATOM 15 C2 C B 6 -1.982 -7.162 14.957 1.00 44.67 C
ATOM 16 O2 C B 6 -1.277 -7.066 13.928 1.00 46.79 O
ATOM 17 N3 C B 6 -1.592 -7.889 16.034 1.00 48.49 N
ATOM 18 C4 C B 6 -2.378 -7.960 17.116 1.00 51.65 C
ATOM 19 N4 C B 6 -1.963 -8.687 18.155 1.00 55.10 N
ATOM 20 C5 C B 6 -3.630 -7.278 17.183 1.00 49.27 C
ATOM 21 C6 C B 6 -4.007 -6.562 16.118 1.00 47.00 C
ATOM 22 P A B 7 -8.031 -4.044 13.286 1.00 43.74 P
ATOM 23 OP1 A B 7 -8.472 -3.679 14.665 1.00 43.94 O
ATOM 24 OP2 A B 7 -8.067 -5.487 12.899 1.00 44.14 O
ATOM 25 O5' A B 7 -8.759 -3.112 12.232 1.00 44.24 O
TER
ATOM 2 P A A 8 -11.485 -5.713 8.131 1.00 47.84 P
ATOM 3 OP1 A A 8 -12.892 -5.949 7.709 1.00 58.83 O
ATOM 4 OP2 A A 8 -10.922 -6.383 9.331 1.00 48.03 O
ATOM 5 O5' A A 8 -10.524 -5.979 6.896 1.00 50.29 O
ATOM 6 C5' A A 8 -10.899 -5.524 5.606 1.00 48.45 C
ATOM 7 C4' A A 8 -9.699 -5.009 4.851 1.00 54.64 C
ATOM 8 O4' A A 8 -9.122 -3.873 5.545 1.00 47.87 O
ATOM 9 C3' A A 8 -8.538 -5.978 4.712 1.00 57.84 C
ATOM 10 O3' A A 8 -8.741 -6.913 3.671 1.00 60.83 O
ATOM 11 C2' A A 8 -7.368 -5.038 4.458 1.00 51.92 C
ATOM 12 O2' A A 8 -7.418 -4.597 3.108 1.00 52.58 O
ATOM 13 C1' A A 8 -7.722 -3.851 5.357 1.00 43.62 C
ATOM 14 N9 A A 8 -7.042 -3.865 6.676 1.00 39.90 N
ATOM 15 C8 A A 8 -7.015 -4.863 7.621 1.00 45.83 C
ATOM 16 N7 A A 8 -6.315 -4.561 8.696 1.00 49.13 N
ATOM 17 C5 A A 8 -5.843 -3.275 8.432 1.00 40.49 C
ATOM 18 C6 A A 8 -5.039 -2.386 9.170 1.00 37.91 C
ATOM 19 N6 A A 8 -4.546 -2.686 10.382 1.00 34.09 N
ATOM 20 N1 A A 8 -4.752 -1.174 8.616 1.00 27.71 N
ATOM 21 C2 A A 8 -5.243 -0.892 7.407 1.00 26.81 C
ATOM 22 N3 A A 8 -6.008 -1.646 6.623 1.00 36.16 N
ATOM 23 C4 A A 8 -6.280 -2.840 7.196 1.00 36.61 C
ATOM 24 P C A 9 -8.617 -8.486 3.961 1.00 55.41 P
ATOM 25 OP1 C A 9 -8.732 -9.127 2.635 1.00 56.62 O
ATOM 26 OP2 C A 9 -9.572 -8.820 5.056 1.00 59.94 O
ATOM 27 O5' C A 9 -7.142 -8.672 4.518 1.00 65.89 O
TER
ATOM 1 O3' U B 5 -4.306 -2.115 18.503 1.00 31.53 O
ATOM 2 P C B 6 -4.258 -1.338 17.118 1.00 38.76 P
ATOM 3 OP1 C B 6 -2.992 -0.552 17.009 1.00 37.50 O
ATOM 4 OP2 C B 6 -5.555 -0.652 17.000 1.00 33.03 O
ATOM 5 O5' C B 6 -4.212 -2.543 16.086 1.00 45.06 O
ATOM 6 C5' C B 6 -4.051 -2.212 14.717 1.00 35.01 C
ATOM 7 C4' C B 6 -4.161 -3.424 13.832 1.00 37.09 C
ATOM 8 O4' C B 6 -3.140 -4.394 14.162 1.00 42.82 O
ATOM 9 C3' C B 6 -5.459 -4.204 13.907 1.00 40.15 C
ATOM 10 O3' C B 6 -6.492 -3.561 13.167 1.00 36.53 O
ATOM 11 C2' C B 6 -5.046 -5.574 13.362 1.00 47.43 C
ATOM 12 O2' C B 6 -5.035 -5.557 11.940 1.00 51.65 O
ATOM 13 C1' C B 6 -3.587 -5.692 13.827 1.00 47.23 C
ATOM 14 N1 C B 6 -3.225 -6.509 14.995 1.00 45.02 N
ATOM 15 C2 C B 6 -1.982 -7.162 14.957 1.00 44.67 C
ATOM 16 O2 C B 6 -1.277 -7.066 13.928 1.00 46.79 O
ATOM 17 N3 C B 6 -1.592 -7.889 16.034 1.00 48.49 N
ATOM 18 C4 C B 6 -2.378 -7.960 17.116 1.00 51.65 C
ATOM 19 N4 C B 6 -1.963 -8.687 18.155 1.00 55.10 N
ATOM 20 C5 C B 6 -3.630 -7.278 17.183 1.00 49.27 C
ATOM 21 C6 C B 6 -4.007 -6.562 16.118 1.00 47.00 C
ATOM 22 P A B 7 -8.031 -4.044 13.286 1.00 43.74 P
ATOM 23 OP1 A B 7 -8.472 -3.679 14.665 1.00 43.94 O
ATOM 24 OP2 A B 7 -8.067 -5.487 12.899 1.00 44.14 O
ATOM 25 O5' A B 7 -8.759 -3.112 12.232 1.00 44.24 O
TER
Atoms:
OP1: (-12.892,-5.949,7.709)
OP2: (-10.922,-6.383,9.331)
C3': (-8.538,-5.978,4.712)
C1': (-7.722,-3.851,5.357)
C5': (-10.899,-5.524,5.606)
O4': (-9.122,-3.873,5.545)
C8: (-7.015,-4.863,7.621)
O2': (-7.418,-4.597,3.108)
C6: (-5.039,-2.386,9.170)
C5: (-5.843,-3.275,8.432)
C4: (-6.280,-2.840,7.196)
P: (-11.485,-5.713,8.131)
C4': (-9.699,-5.009,4.851)
C2': (-7.368,-5.038,4.458)
C2: (-5.243,-0.892,7.407)
N1: (-4.752,-1.174,8.616)
N3: (-6.008,-1.646,6.623)
N6: (-4.546,-2.686,10.382)
N7: (-6.315,-4.561,8.696)
N9: (-7.042,-3.865,6.676)
O5': (-10.524,-5.979,6.896)
O3': (-8.741,-6.913,3.671)
OP2: (-10.922,-6.383,9.331)
C3': (-8.538,-5.978,4.712)
C1': (-7.722,-3.851,5.357)
C5': (-10.899,-5.524,5.606)
O4': (-9.122,-3.873,5.545)
C8: (-7.015,-4.863,7.621)
O2': (-7.418,-4.597,3.108)
C6: (-5.039,-2.386,9.170)
C5: (-5.843,-3.275,8.432)
C4: (-6.280,-2.840,7.196)
P: (-11.485,-5.713,8.131)
C4': (-9.699,-5.009,4.851)
C2': (-7.368,-5.038,4.458)
C2: (-5.243,-0.892,7.407)
N1: (-4.752,-1.174,8.616)
N3: (-6.008,-1.646,6.623)
N6: (-4.546,-2.686,10.382)
N7: (-6.315,-4.561,8.696)
N9: (-7.042,-3.865,6.676)
O5': (-10.524,-5.979,6.896)
O3': (-8.741,-6.913,3.671)
C2: (-1.982,-7.162,14.957)
OP1: (-2.992,-0.552,17.009)
OP2: (-5.555,-0.652,17.000)
C4: (-2.378,-7.960,17.116)
O5': (-4.212,-2.543,16.086)
C3': (-5.459,-4.204,13.907)
C1': (-3.587,-5.692,13.827)
O4': (-3.140,-4.394,14.162)
C5': (-4.051,-2.212,14.717)
P: (-4.258,-1.338,17.118)
O2: (-1.277,-7.066,13.928)
C4': (-4.161,-3.424,13.832)
C2': (-5.046,-5.574,13.362)
O2': (-5.035,-5.557,11.940)
N1: (-3.225,-6.509,14.995)
N3: (-1.592,-7.889,16.034)
N4: (-1.963,-8.687,18.155)
C6: (-4.007,-6.562,16.118)
C5: (-3.630,-7.278,17.183)
O3': (-6.492,-3.561,13.167)
OP1: (-2.992,-0.552,17.009)
OP2: (-5.555,-0.652,17.000)
C4: (-2.378,-7.960,17.116)
O5': (-4.212,-2.543,16.086)
C3': (-5.459,-4.204,13.907)
C1': (-3.587,-5.692,13.827)
O4': (-3.140,-4.394,14.162)
C5': (-4.051,-2.212,14.717)
P: (-4.258,-1.338,17.118)
O2: (-1.277,-7.066,13.928)
C4': (-4.161,-3.424,13.832)
C2': (-5.046,-5.574,13.362)
O2': (-5.035,-5.557,11.940)
N1: (-3.225,-6.509,14.995)
N3: (-1.592,-7.889,16.034)
N4: (-1.963,-8.687,18.155)
C6: (-4.007,-6.562,16.118)
C5: (-3.630,-7.278,17.183)
O3': (-6.492,-3.561,13.167)
Image (generated by PyMOL):