Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X56:X54
Extra
PDB:
ATOM 1 O3' A A 55 48.477 18.707 15.913 1.00 34.01 O
ATOM 2 P A A 56 48.088 17.384 16.729 1.00 30.73 P
ATOM 3 OP1 A A 56 49.415 16.782 17.022 1.00 34.35 O
ATOM 4 OP2 A A 56 47.123 16.606 15.917 1.00 29.73 O
ATOM 5 O5' A A 56 47.452 17.896 18.092 1.00 29.63 O
ATOM 6 C5' A A 56 48.250 18.548 19.063 1.00 27.42 C
ATOM 7 C4' A A 56 47.359 19.195 20.090 1.00 28.51 C
ATOM 8 O4' A A 56 46.515 20.171 19.428 1.00 30.29 O
ATOM 9 C3' A A 56 46.373 18.262 20.772 1.00 27.79 C
ATOM 10 O3' A A 56 46.953 17.601 21.876 1.00 27.62 O
ATOM 11 C2' A A 56 45.247 19.199 21.173 1.00 25.26 C
ATOM 12 O2' A A 56 45.667 19.967 22.294 1.00 27.24 O
ATOM 13 C1' A A 56 45.210 20.137 19.972 1.00 27.27 C
ATOM 14 N9 A A 56 44.306 19.720 18.885 1.00 24.57 N
ATOM 15 C8 A A 56 44.605 18.926 17.802 1.00 25.57 C
ATOM 16 N7 A A 56 43.596 18.766 16.964 1.00 24.28 N
ATOM 17 C5 A A 56 42.579 19.525 17.522 1.00 22.01 C
ATOM 18 C6 A A 56 41.258 19.781 17.121 1.00 22.33 C
ATOM 19 N6 A A 56 40.726 19.264 16.018 1.00 19.64 N
ATOM 20 N1 A A 56 40.492 20.568 17.917 1.00 22.07 N
ATOM 21 C2 A A 56 41.039 21.074 19.027 1.00 23.39 C
ATOM 22 N3 A A 56 42.277 20.906 19.501 1.00 25.72 N
ATOM 23 C4 A A 56 43.001 20.122 18.698 1.00 22.61 C
ATOM 24 P A A 57 46.352 16.220 22.402 1.00 27.88 P
ATOM 25 OP1 A A 57 47.277 15.880 23.514 1.00 32.31 O
ATOM 26 OP2 A A 57 46.158 15.285 21.269 1.00 28.88 O
ATOM 27 O5' A A 57 44.919 16.540 23.023 1.00 24.95 O
TER
ATOM 1 O3' C B 53 42.448 13.301 8.757 1.00 26.46 O
ATOM 2 P C B 54 43.788 14.179 8.799 1.00 29.43 P
ATOM 3 OP1 C B 54 43.576 15.098 7.648 1.00 34.79 O
ATOM 4 OP2 C B 54 44.947 13.259 8.840 1.00 32.63 O
ATOM 5 O5' C B 54 43.714 15.009 10.157 1.00 28.86 O
ATOM 6 C5' C B 54 42.680 15.955 10.372 1.00 26.35 C
ATOM 7 C4' C B 54 42.653 16.419 11.808 1.00 27.32 C
ATOM 8 O4' C B 54 42.376 15.293 12.685 1.00 26.00 O
ATOM 9 C3' C B 54 43.951 16.998 12.353 1.00 27.51 C
ATOM 10 O3' C B 54 44.186 18.337 11.936 1.00 33.42 O
ATOM 11 C2' C B 54 43.775 16.829 13.860 1.00 27.57 C
ATOM 12 O2' C B 54 42.990 17.878 14.424 1.00 24.44 O
ATOM 13 C1' C B 54 43.002 15.504 13.932 1.00 25.14 C
ATOM 14 N1 C B 54 43.948 14.417 14.201 1.00 27.65 N
ATOM 15 C2 C B 54 44.215 14.139 15.540 1.00 29.72 C
ATOM 16 O2 C B 54 43.601 14.811 16.383 1.00 28.48 O
ATOM 17 N3 C B 54 45.101 13.162 15.859 1.00 30.83 N
ATOM 18 C4 C B 54 45.711 12.494 14.870 1.00 32.54 C
ATOM 19 N4 C B 54 46.581 11.526 15.192 1.00 36.97 N
ATOM 20 C5 C B 54 45.455 12.769 13.493 1.00 30.89 C
ATOM 21 C6 C B 54 44.575 13.739 13.203 1.00 30.42 C
ATOM 22 P A B 55 45.640 18.825 11.400 1.00 32.92 P
ATOM 23 OP1 A B 55 45.395 20.190 10.865 1.00 34.35 O
ATOM 24 OP2 A B 55 46.205 17.805 10.485 1.00 35.70 O
ATOM 25 O5' A B 55 46.446 18.863 12.773 1.00 28.01 O
TER
ATOM 2 P A A 56 48.088 17.384 16.729 1.00 30.73 P
ATOM 3 OP1 A A 56 49.415 16.782 17.022 1.00 34.35 O
ATOM 4 OP2 A A 56 47.123 16.606 15.917 1.00 29.73 O
ATOM 5 O5' A A 56 47.452 17.896 18.092 1.00 29.63 O
ATOM 6 C5' A A 56 48.250 18.548 19.063 1.00 27.42 C
ATOM 7 C4' A A 56 47.359 19.195 20.090 1.00 28.51 C
ATOM 8 O4' A A 56 46.515 20.171 19.428 1.00 30.29 O
ATOM 9 C3' A A 56 46.373 18.262 20.772 1.00 27.79 C
ATOM 10 O3' A A 56 46.953 17.601 21.876 1.00 27.62 O
ATOM 11 C2' A A 56 45.247 19.199 21.173 1.00 25.26 C
ATOM 12 O2' A A 56 45.667 19.967 22.294 1.00 27.24 O
ATOM 13 C1' A A 56 45.210 20.137 19.972 1.00 27.27 C
ATOM 14 N9 A A 56 44.306 19.720 18.885 1.00 24.57 N
ATOM 15 C8 A A 56 44.605 18.926 17.802 1.00 25.57 C
ATOM 16 N7 A A 56 43.596 18.766 16.964 1.00 24.28 N
ATOM 17 C5 A A 56 42.579 19.525 17.522 1.00 22.01 C
ATOM 18 C6 A A 56 41.258 19.781 17.121 1.00 22.33 C
ATOM 19 N6 A A 56 40.726 19.264 16.018 1.00 19.64 N
ATOM 20 N1 A A 56 40.492 20.568 17.917 1.00 22.07 N
ATOM 21 C2 A A 56 41.039 21.074 19.027 1.00 23.39 C
ATOM 22 N3 A A 56 42.277 20.906 19.501 1.00 25.72 N
ATOM 23 C4 A A 56 43.001 20.122 18.698 1.00 22.61 C
ATOM 24 P A A 57 46.352 16.220 22.402 1.00 27.88 P
ATOM 25 OP1 A A 57 47.277 15.880 23.514 1.00 32.31 O
ATOM 26 OP2 A A 57 46.158 15.285 21.269 1.00 28.88 O
ATOM 27 O5' A A 57 44.919 16.540 23.023 1.00 24.95 O
TER
ATOM 1 O3' C B 53 42.448 13.301 8.757 1.00 26.46 O
ATOM 2 P C B 54 43.788 14.179 8.799 1.00 29.43 P
ATOM 3 OP1 C B 54 43.576 15.098 7.648 1.00 34.79 O
ATOM 4 OP2 C B 54 44.947 13.259 8.840 1.00 32.63 O
ATOM 5 O5' C B 54 43.714 15.009 10.157 1.00 28.86 O
ATOM 6 C5' C B 54 42.680 15.955 10.372 1.00 26.35 C
ATOM 7 C4' C B 54 42.653 16.419 11.808 1.00 27.32 C
ATOM 8 O4' C B 54 42.376 15.293 12.685 1.00 26.00 O
ATOM 9 C3' C B 54 43.951 16.998 12.353 1.00 27.51 C
ATOM 10 O3' C B 54 44.186 18.337 11.936 1.00 33.42 O
ATOM 11 C2' C B 54 43.775 16.829 13.860 1.00 27.57 C
ATOM 12 O2' C B 54 42.990 17.878 14.424 1.00 24.44 O
ATOM 13 C1' C B 54 43.002 15.504 13.932 1.00 25.14 C
ATOM 14 N1 C B 54 43.948 14.417 14.201 1.00 27.65 N
ATOM 15 C2 C B 54 44.215 14.139 15.540 1.00 29.72 C
ATOM 16 O2 C B 54 43.601 14.811 16.383 1.00 28.48 O
ATOM 17 N3 C B 54 45.101 13.162 15.859 1.00 30.83 N
ATOM 18 C4 C B 54 45.711 12.494 14.870 1.00 32.54 C
ATOM 19 N4 C B 54 46.581 11.526 15.192 1.00 36.97 N
ATOM 20 C5 C B 54 45.455 12.769 13.493 1.00 30.89 C
ATOM 21 C6 C B 54 44.575 13.739 13.203 1.00 30.42 C
ATOM 22 P A B 55 45.640 18.825 11.400 1.00 32.92 P
ATOM 23 OP1 A B 55 45.395 20.190 10.865 1.00 34.35 O
ATOM 24 OP2 A B 55 46.205 17.805 10.485 1.00 35.70 O
ATOM 25 O5' A B 55 46.446 18.863 12.773 1.00 28.01 O
TER
Atoms:
OP1: (49.415,16.782,17.022)
OP2: (47.123,16.606,15.917)
C3': (46.373,18.262,20.772)
C1': (45.210,20.137,19.972)
C5': (48.250,18.548,19.063)
O4': (46.515,20.171,19.428)
C8: (44.605,18.926,17.802)
O2': (45.667,19.967,22.294)
C6: (41.258,19.781,17.121)
C5: (42.579,19.525,17.522)
C4: (43.001,20.122,18.698)
P: (48.088,17.384,16.729)
C4': (47.359,19.195,20.090)
C2': (45.247,19.199,21.173)
C2: (41.039,21.074,19.027)
N1: (40.492,20.568,17.917)
N3: (42.277,20.906,19.501)
N6: (40.726,19.264,16.018)
N7: (43.596,18.766,16.964)
N9: (44.306,19.720,18.885)
O5': (47.452,17.896,18.092)
O3': (46.953,17.601,21.876)
OP2: (47.123,16.606,15.917)
C3': (46.373,18.262,20.772)
C1': (45.210,20.137,19.972)
C5': (48.250,18.548,19.063)
O4': (46.515,20.171,19.428)
C8: (44.605,18.926,17.802)
O2': (45.667,19.967,22.294)
C6: (41.258,19.781,17.121)
C5: (42.579,19.525,17.522)
C4: (43.001,20.122,18.698)
P: (48.088,17.384,16.729)
C4': (47.359,19.195,20.090)
C2': (45.247,19.199,21.173)
C2: (41.039,21.074,19.027)
N1: (40.492,20.568,17.917)
N3: (42.277,20.906,19.501)
N6: (40.726,19.264,16.018)
N7: (43.596,18.766,16.964)
N9: (44.306,19.720,18.885)
O5': (47.452,17.896,18.092)
O3': (46.953,17.601,21.876)
C2: (44.215,14.139,15.540)
OP1: (43.576,15.098,7.648)
OP2: (44.947,13.259,8.840)
C4: (45.711,12.494,14.870)
O5': (43.714,15.009,10.157)
C3': (43.951,16.998,12.353)
C1': (43.002,15.504,13.932)
O4': (42.376,15.293,12.685)
C5': (42.680,15.955,10.372)
P: (43.788,14.179,8.799)
O2: (43.601,14.811,16.383)
C4': (42.653,16.419,11.808)
C2': (43.775,16.829,13.860)
O2': (42.990,17.878,14.424)
N1: (43.948,14.417,14.201)
N3: (45.101,13.162,15.859)
N4: (46.581,11.526,15.192)
C6: (44.575,13.739,13.203)
C5: (45.455,12.769,13.493)
O3': (44.186,18.337,11.936)
OP1: (43.576,15.098,7.648)
OP2: (44.947,13.259,8.840)
C4: (45.711,12.494,14.870)
O5': (43.714,15.009,10.157)
C3': (43.951,16.998,12.353)
C1': (43.002,15.504,13.932)
O4': (42.376,15.293,12.685)
C5': (42.680,15.955,10.372)
P: (43.788,14.179,8.799)
O2: (43.601,14.811,16.383)
C4': (42.653,16.419,11.808)
C2': (43.775,16.829,13.860)
O2': (42.990,17.878,14.424)
N1: (43.948,14.417,14.201)
N3: (45.101,13.162,15.859)
N4: (46.581,11.526,15.192)
C6: (44.575,13.739,13.203)
C5: (45.455,12.769,13.493)
O3': (44.186,18.337,11.936)
Image (generated by PyMOL):