Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0999:0917
Extra
PDB:
ATOM 1 O3' G A 998 43.650 95.137 67.592 1.00 41.27 O
ATOM 2 P A A 999 45.206 94.965 67.937 1.00 42.83 P
ATOM 3 OP1 A A 999 45.747 96.325 68.204 1.00 43.03 O
ATOM 4 OP2 A A 999 45.848 94.107 66.910 1.00 42.62 O
ATOM 5 O5' A A 999 45.179 94.123 69.284 1.00 40.29 O
ATOM 6 C5' A A 999 45.523 94.716 70.535 1.00 36.73 C
ATOM 7 C4' A A 999 44.276 95.146 71.260 1.00 35.44 C
ATOM 8 O4' A A 999 43.398 94.020 71.499 1.00 32.17 O
ATOM 9 C3' A A 999 44.540 95.699 72.638 1.00 35.35 C
ATOM 10 O3' A A 999 44.966 97.047 72.530 1.00 37.55 O
ATOM 11 C2' A A 999 43.188 95.532 73.315 1.00 33.29 C
ATOM 12 O2' A A 999 42.257 96.519 72.948 1.00 32.92 O
ATOM 13 C1' A A 999 42.742 94.188 72.744 1.00 31.30 C
ATOM 14 N9 A A 999 43.113 93.076 73.614 1.00 30.85 N
ATOM 15 C8 A A 999 43.961 92.033 73.343 1.00 30.73 C
ATOM 16 N7 A A 999 44.098 91.194 74.340 1.00 30.39 N
ATOM 17 C5 A A 999 43.289 91.721 75.334 1.00 29.40 C
ATOM 18 C6 A A 999 43.019 91.310 76.647 1.00 29.41 C
ATOM 19 N6 A A 999 43.534 90.214 77.201 1.00 29.40 N
ATOM 20 N1 A A 999 42.190 92.072 77.384 1.00 29.09 N
ATOM 21 C2 A A 999 41.661 93.163 76.826 1.00 30.80 C
ATOM 22 N3 A A 999 41.829 93.648 75.600 1.00 31.35 N
ATOM 23 C4 A A 999 42.671 92.875 74.899 1.00 30.37 C
ATOM 24 P U A1000 46.409 97.463 73.080 1.00 37.03 P
ATOM 25 OP1 U A1000 46.710 98.758 72.450 1.00 38.60 O
ATOM 26 OP2 U A1000 47.341 96.329 72.901 1.00 35.29 O
ATOM 27 O5' U A1000 46.161 97.683 74.637 1.00 36.55 O
TER
ATOM 1 O3' A B 916 44.869 81.474 81.059 1.00 42.89 O
ATOM 2 P C B 917 43.387 81.602 80.456 1.00 46.19 P
ATOM 3 OP1 C B 917 42.534 80.616 81.153 1.00 45.45 O
ATOM 4 OP2 C B 917 43.453 81.591 78.976 1.00 45.20 O
ATOM 5 O5' C B 917 42.926 83.067 80.875 1.00 42.91 O
ATOM 6 C5' C B 917 42.711 83.418 82.249 1.00 38.17 C
ATOM 7 C4' C B 917 42.572 84.911 82.375 1.00 36.40 C
ATOM 8 O4' C B 917 43.815 85.549 81.972 1.00 38.25 O
ATOM 9 C3' C B 917 41.555 85.519 81.433 1.00 36.16 C
ATOM 10 O3' C B 917 40.244 85.413 81.928 1.00 36.49 O
ATOM 11 C2' C B 917 42.024 86.958 81.343 1.00 36.38 C
ATOM 12 O2' C B 917 41.706 87.694 82.501 1.00 39.20 O
ATOM 13 C1' C B 917 43.533 86.758 81.278 1.00 36.26 C
ATOM 14 N1 C B 917 43.978 86.626 79.879 1.00 34.83 N
ATOM 15 C2 C B 917 44.131 87.780 79.122 1.00 35.99 C
ATOM 16 O2 C B 917 43.898 88.875 79.655 1.00 38.10 O
ATOM 17 N3 C B 917 44.518 87.683 77.827 1.00 35.31 N
ATOM 18 C4 C B 917 44.733 86.487 77.288 1.00 35.08 C
ATOM 19 N4 C B 917 45.077 86.431 76.003 1.00 35.34 N
ATOM 20 C5 C B 917 44.595 85.290 78.041 1.00 35.84 C
ATOM 21 C6 C B 917 44.223 85.403 79.322 1.00 35.43 C
ATOM 22 P C B 918 39.018 85.398 80.901 1.00 37.64 P
ATOM 23 OP1 C B 918 37.794 85.059 81.683 1.00 38.00 O
ATOM 24 OP2 C B 918 39.415 84.564 79.740 1.00 33.87 O
ATOM 25 O5' C B 918 38.912 86.895 80.379 1.00 36.25 O
TER
ATOM 2 P A A 999 45.206 94.965 67.937 1.00 42.83 P
ATOM 3 OP1 A A 999 45.747 96.325 68.204 1.00 43.03 O
ATOM 4 OP2 A A 999 45.848 94.107 66.910 1.00 42.62 O
ATOM 5 O5' A A 999 45.179 94.123 69.284 1.00 40.29 O
ATOM 6 C5' A A 999 45.523 94.716 70.535 1.00 36.73 C
ATOM 7 C4' A A 999 44.276 95.146 71.260 1.00 35.44 C
ATOM 8 O4' A A 999 43.398 94.020 71.499 1.00 32.17 O
ATOM 9 C3' A A 999 44.540 95.699 72.638 1.00 35.35 C
ATOM 10 O3' A A 999 44.966 97.047 72.530 1.00 37.55 O
ATOM 11 C2' A A 999 43.188 95.532 73.315 1.00 33.29 C
ATOM 12 O2' A A 999 42.257 96.519 72.948 1.00 32.92 O
ATOM 13 C1' A A 999 42.742 94.188 72.744 1.00 31.30 C
ATOM 14 N9 A A 999 43.113 93.076 73.614 1.00 30.85 N
ATOM 15 C8 A A 999 43.961 92.033 73.343 1.00 30.73 C
ATOM 16 N7 A A 999 44.098 91.194 74.340 1.00 30.39 N
ATOM 17 C5 A A 999 43.289 91.721 75.334 1.00 29.40 C
ATOM 18 C6 A A 999 43.019 91.310 76.647 1.00 29.41 C
ATOM 19 N6 A A 999 43.534 90.214 77.201 1.00 29.40 N
ATOM 20 N1 A A 999 42.190 92.072 77.384 1.00 29.09 N
ATOM 21 C2 A A 999 41.661 93.163 76.826 1.00 30.80 C
ATOM 22 N3 A A 999 41.829 93.648 75.600 1.00 31.35 N
ATOM 23 C4 A A 999 42.671 92.875 74.899 1.00 30.37 C
ATOM 24 P U A1000 46.409 97.463 73.080 1.00 37.03 P
ATOM 25 OP1 U A1000 46.710 98.758 72.450 1.00 38.60 O
ATOM 26 OP2 U A1000 47.341 96.329 72.901 1.00 35.29 O
ATOM 27 O5' U A1000 46.161 97.683 74.637 1.00 36.55 O
TER
ATOM 1 O3' A B 916 44.869 81.474 81.059 1.00 42.89 O
ATOM 2 P C B 917 43.387 81.602 80.456 1.00 46.19 P
ATOM 3 OP1 C B 917 42.534 80.616 81.153 1.00 45.45 O
ATOM 4 OP2 C B 917 43.453 81.591 78.976 1.00 45.20 O
ATOM 5 O5' C B 917 42.926 83.067 80.875 1.00 42.91 O
ATOM 6 C5' C B 917 42.711 83.418 82.249 1.00 38.17 C
ATOM 7 C4' C B 917 42.572 84.911 82.375 1.00 36.40 C
ATOM 8 O4' C B 917 43.815 85.549 81.972 1.00 38.25 O
ATOM 9 C3' C B 917 41.555 85.519 81.433 1.00 36.16 C
ATOM 10 O3' C B 917 40.244 85.413 81.928 1.00 36.49 O
ATOM 11 C2' C B 917 42.024 86.958 81.343 1.00 36.38 C
ATOM 12 O2' C B 917 41.706 87.694 82.501 1.00 39.20 O
ATOM 13 C1' C B 917 43.533 86.758 81.278 1.00 36.26 C
ATOM 14 N1 C B 917 43.978 86.626 79.879 1.00 34.83 N
ATOM 15 C2 C B 917 44.131 87.780 79.122 1.00 35.99 C
ATOM 16 O2 C B 917 43.898 88.875 79.655 1.00 38.10 O
ATOM 17 N3 C B 917 44.518 87.683 77.827 1.00 35.31 N
ATOM 18 C4 C B 917 44.733 86.487 77.288 1.00 35.08 C
ATOM 19 N4 C B 917 45.077 86.431 76.003 1.00 35.34 N
ATOM 20 C5 C B 917 44.595 85.290 78.041 1.00 35.84 C
ATOM 21 C6 C B 917 44.223 85.403 79.322 1.00 35.43 C
ATOM 22 P C B 918 39.018 85.398 80.901 1.00 37.64 P
ATOM 23 OP1 C B 918 37.794 85.059 81.683 1.00 38.00 O
ATOM 24 OP2 C B 918 39.415 84.564 79.740 1.00 33.87 O
ATOM 25 O5' C B 918 38.912 86.895 80.379 1.00 36.25 O
TER
Atoms:
OP1: (45.747,96.325,68.204)
OP2: (45.848,94.107,66.910)
C3': (44.540,95.699,72.638)
C1': (42.742,94.188,72.744)
C5': (45.523,94.716,70.535)
O4': (43.398,94.020,71.499)
C8: (43.961,92.033,73.343)
O2': (42.257,96.519,72.948)
C6: (43.019,91.310,76.647)
C5: (43.289,91.721,75.334)
C4: (42.671,92.875,74.899)
P: (45.206,94.965,67.937)
C4': (44.276,95.146,71.260)
C2': (43.188,95.532,73.315)
C2: (41.661,93.163,76.826)
N1: (42.190,92.072,77.384)
N3: (41.829,93.648,75.600)
N6: (43.534,90.214,77.201)
N7: (44.098,91.194,74.340)
N9: (43.113,93.076,73.614)
O5': (45.179,94.123,69.284)
O3': (44.966,97.047,72.530)
OP2: (45.848,94.107,66.910)
C3': (44.540,95.699,72.638)
C1': (42.742,94.188,72.744)
C5': (45.523,94.716,70.535)
O4': (43.398,94.020,71.499)
C8: (43.961,92.033,73.343)
O2': (42.257,96.519,72.948)
C6: (43.019,91.310,76.647)
C5: (43.289,91.721,75.334)
C4: (42.671,92.875,74.899)
P: (45.206,94.965,67.937)
C4': (44.276,95.146,71.260)
C2': (43.188,95.532,73.315)
C2: (41.661,93.163,76.826)
N1: (42.190,92.072,77.384)
N3: (41.829,93.648,75.600)
N6: (43.534,90.214,77.201)
N7: (44.098,91.194,74.340)
N9: (43.113,93.076,73.614)
O5': (45.179,94.123,69.284)
O3': (44.966,97.047,72.530)
C2: (44.131,87.780,79.122)
OP1: (42.534,80.616,81.153)
OP2: (43.453,81.591,78.976)
C4: (44.733,86.487,77.288)
O5': (42.926,83.067,80.875)
C3': (41.555,85.519,81.433)
C1': (43.533,86.758,81.278)
O4': (43.815,85.549,81.972)
C5': (42.711,83.418,82.249)
P: (43.387,81.602,80.456)
O2: (43.898,88.875,79.655)
C4': (42.572,84.911,82.375)
C2': (42.024,86.958,81.343)
O2': (41.706,87.694,82.501)
N1: (43.978,86.626,79.879)
N3: (44.518,87.683,77.827)
N4: (45.077,86.431,76.003)
C6: (44.223,85.403,79.322)
C5: (44.595,85.290,78.041)
O3': (40.244,85.413,81.928)
OP1: (42.534,80.616,81.153)
OP2: (43.453,81.591,78.976)
C4: (44.733,86.487,77.288)
O5': (42.926,83.067,80.875)
C3': (41.555,85.519,81.433)
C1': (43.533,86.758,81.278)
O4': (43.815,85.549,81.972)
C5': (42.711,83.418,82.249)
P: (43.387,81.602,80.456)
O2: (43.898,88.875,79.655)
C4': (42.572,84.911,82.375)
C2': (42.024,86.958,81.343)
O2': (41.706,87.694,82.501)
N1: (43.978,86.626,79.879)
N3: (44.518,87.683,77.827)
N4: (45.077,86.431,76.003)
C6: (44.223,85.403,79.322)
C5: (44.595,85.290,78.041)
O3': (40.244,85.413,81.928)
Image (generated by PyMOL):