Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2441:A2440
Extra
PDB:
ATOM 1 O3' G A2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 2 P A A2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 3 OP1 A A2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 4 OP2 A A2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 5 O5' A A2441 -87.198 -66.707 11.396 1.00 0.01 O
ATOM 6 C5' A A2441 -87.471 -65.327 11.630 1.00 0.01 C
ATOM 7 C4' A A2441 -88.735 -65.145 12.448 1.00 0.01 C
ATOM 8 O4' A A2441 -88.699 -66.024 13.599 1.00 0.01 O
ATOM 9 C3' A A2441 -89.006 -63.748 13.005 1.00 0.01 C
ATOM 10 O3' A A2441 -90.403 -63.491 12.927 1.00 0.01 O
ATOM 11 C2' A A2441 -88.599 -63.881 14.470 1.00 0.01 C
ATOM 12 O2' A A2441 -89.242 -62.988 15.334 1.00 0.01 O
ATOM 13 C1' A A2441 -89.017 -65.301 14.757 1.00 0.01 C
ATOM 14 N9 A A2441 -88.325 -65.926 15.861 1.00 0.01 N
ATOM 15 C8 A A2441 -87.005 -66.221 15.921 1.00 0.01 C
ATOM 16 N7 A A2441 -86.647 -66.853 17.010 1.00 0.01 N
ATOM 17 C5 A A2441 -87.828 -66.997 17.672 1.00 0.01 C
ATOM 18 C6 A A2441 -88.072 -67.580 18.880 1.00 0.01 C
ATOM 19 N6 A A2441 -87.097 -68.133 19.622 1.00 0.01 N
ATOM 20 N1 A A2441 -89.349 -67.539 19.276 1.00 0.01 N
ATOM 21 C2 A A2441 -90.269 -66.986 18.500 1.00 0.01 C
ATOM 22 N3 A A2441 -90.142 -66.414 17.334 1.00 0.01 N
ATOM 23 C4 A A2441 -88.876 -66.454 16.984 1.00 0.01 C
ATOM 24 P U A2442 -91.096 -63.255 11.498 1.00 0.01 P
ATOM 25 OP1 U A2442 -92.445 -63.853 11.536 1.00 0.01 O
ATOM 26 OP2 U A2442 -90.154 -63.723 10.482 1.00 0.01 O
ATOM 27 O5' U A2442 -91.202 -61.680 11.456 1.00 0.01 O
TER
ATOM 1 O3' G B2439 -83.701 -66.651 14.070 1.00 0.01 O
ATOM 2 P G B2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 3 OP1 G B2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 4 OP2 G B2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 5 O5' G B2440 -83.055 -67.821 11.986 1.00 0.01 O
ATOM 6 C5' G B2440 -82.633 -66.663 11.304 1.00 0.01 C
ATOM 7 C4' G B2440 -83.772 -66.016 10.576 1.00 0.01 C
ATOM 8 O4' G B2440 -83.283 -64.869 9.858 1.00 0.01 O
ATOM 9 C3' G B2440 -84.461 -66.874 9.534 1.00 0.01 C
ATOM 10 O3' G B2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 11 C2' G B2440 -83.745 -66.469 8.290 1.00 0.01 C
ATOM 12 O2' G B2440 -84.456 -66.757 7.120 1.00 0.01 O
ATOM 13 C1' G B2440 -83.673 -64.985 8.531 1.00 0.01 C
ATOM 14 N9 G B2440 -82.721 -64.288 7.710 1.00 0.01 N
ATOM 15 C8 G B2440 -81.420 -64.602 7.570 1.00 0.01 C
ATOM 16 N7 G B2440 -80.828 -63.800 6.759 1.00 0.01 N
ATOM 17 C5 G B2440 -81.810 -62.943 6.363 1.00 0.01 C
ATOM 18 C6 G B2440 -81.692 -61.880 5.474 1.00 0.01 C
ATOM 19 O6 G B2440 -80.642 -61.540 4.909 1.00 0.01 O
ATOM 20 N1 G B2440 -82.922 -61.220 5.331 1.00 0.01 N
ATOM 21 C2 G B2440 -84.095 -61.560 5.986 1.00 0.01 C
ATOM 22 N2 G B2440 -85.159 -60.784 5.692 1.00 0.01 N
ATOM 23 N3 G B2440 -84.195 -62.583 6.826 1.00 0.01 N
ATOM 24 C4 G B2440 -83.008 -63.210 6.945 1.00 0.01 C
ATOM 25 P A B2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 26 OP1 A B2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 27 OP2 A B2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 28 O5' A B2441 -87.198 -66.707 11.396 1.00 0.01 O
TER
ATOM 2 P A A2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 3 OP1 A A2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 4 OP2 A A2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 5 O5' A A2441 -87.198 -66.707 11.396 1.00 0.01 O
ATOM 6 C5' A A2441 -87.471 -65.327 11.630 1.00 0.01 C
ATOM 7 C4' A A2441 -88.735 -65.145 12.448 1.00 0.01 C
ATOM 8 O4' A A2441 -88.699 -66.024 13.599 1.00 0.01 O
ATOM 9 C3' A A2441 -89.006 -63.748 13.005 1.00 0.01 C
ATOM 10 O3' A A2441 -90.403 -63.491 12.927 1.00 0.01 O
ATOM 11 C2' A A2441 -88.599 -63.881 14.470 1.00 0.01 C
ATOM 12 O2' A A2441 -89.242 -62.988 15.334 1.00 0.01 O
ATOM 13 C1' A A2441 -89.017 -65.301 14.757 1.00 0.01 C
ATOM 14 N9 A A2441 -88.325 -65.926 15.861 1.00 0.01 N
ATOM 15 C8 A A2441 -87.005 -66.221 15.921 1.00 0.01 C
ATOM 16 N7 A A2441 -86.647 -66.853 17.010 1.00 0.01 N
ATOM 17 C5 A A2441 -87.828 -66.997 17.672 1.00 0.01 C
ATOM 18 C6 A A2441 -88.072 -67.580 18.880 1.00 0.01 C
ATOM 19 N6 A A2441 -87.097 -68.133 19.622 1.00 0.01 N
ATOM 20 N1 A A2441 -89.349 -67.539 19.276 1.00 0.01 N
ATOM 21 C2 A A2441 -90.269 -66.986 18.500 1.00 0.01 C
ATOM 22 N3 A A2441 -90.142 -66.414 17.334 1.00 0.01 N
ATOM 23 C4 A A2441 -88.876 -66.454 16.984 1.00 0.01 C
ATOM 24 P U A2442 -91.096 -63.255 11.498 1.00 0.01 P
ATOM 25 OP1 U A2442 -92.445 -63.853 11.536 1.00 0.01 O
ATOM 26 OP2 U A2442 -90.154 -63.723 10.482 1.00 0.01 O
ATOM 27 O5' U A2442 -91.202 -61.680 11.456 1.00 0.01 O
TER
ATOM 1 O3' G B2439 -83.701 -66.651 14.070 1.00 0.01 O
ATOM 2 P G B2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 3 OP1 G B2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 4 OP2 G B2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 5 O5' G B2440 -83.055 -67.821 11.986 1.00 0.01 O
ATOM 6 C5' G B2440 -82.633 -66.663 11.304 1.00 0.01 C
ATOM 7 C4' G B2440 -83.772 -66.016 10.576 1.00 0.01 C
ATOM 8 O4' G B2440 -83.283 -64.869 9.858 1.00 0.01 O
ATOM 9 C3' G B2440 -84.461 -66.874 9.534 1.00 0.01 C
ATOM 10 O3' G B2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 11 C2' G B2440 -83.745 -66.469 8.290 1.00 0.01 C
ATOM 12 O2' G B2440 -84.456 -66.757 7.120 1.00 0.01 O
ATOM 13 C1' G B2440 -83.673 -64.985 8.531 1.00 0.01 C
ATOM 14 N9 G B2440 -82.721 -64.288 7.710 1.00 0.01 N
ATOM 15 C8 G B2440 -81.420 -64.602 7.570 1.00 0.01 C
ATOM 16 N7 G B2440 -80.828 -63.800 6.759 1.00 0.01 N
ATOM 17 C5 G B2440 -81.810 -62.943 6.363 1.00 0.01 C
ATOM 18 C6 G B2440 -81.692 -61.880 5.474 1.00 0.01 C
ATOM 19 O6 G B2440 -80.642 -61.540 4.909 1.00 0.01 O
ATOM 20 N1 G B2440 -82.922 -61.220 5.331 1.00 0.01 N
ATOM 21 C2 G B2440 -84.095 -61.560 5.986 1.00 0.01 C
ATOM 22 N2 G B2440 -85.159 -60.784 5.692 1.00 0.01 N
ATOM 23 N3 G B2440 -84.195 -62.583 6.826 1.00 0.01 N
ATOM 24 C4 G B2440 -83.008 -63.210 6.945 1.00 0.01 C
ATOM 25 P A B2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 26 OP1 A B2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 27 OP2 A B2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 28 O5' A B2441 -87.198 -66.707 11.396 1.00 0.01 O
TER
Atoms:
OP1: (-86.567,-68.647,9.966)
OP2: (-88.149,-66.954,9.084)
C3': (-89.006,-63.748,13.005)
C1': (-89.017,-65.301,14.757)
C5': (-87.471,-65.327,11.630)
O4': (-88.699,-66.024,13.599)
C8: (-87.005,-66.221,15.921)
O2': (-89.242,-62.988,15.334)
C6: (-88.072,-67.580,18.880)
C5: (-87.828,-66.997,17.672)
C4: (-88.876,-66.454,16.984)
P: (-87.001,-67.281,9.927)
C4': (-88.735,-65.145,12.448)
C2': (-88.599,-63.881,14.470)
C2: (-90.269,-66.986,18.500)
N1: (-89.349,-67.539,19.276)
N3: (-90.142,-66.414,17.334)
N6: (-87.097,-68.133,19.622)
N7: (-86.647,-66.853,17.010)
N9: (-88.325,-65.926,15.861)
O5': (-87.198,-66.707,11.396)
O3': (-90.403,-63.491,12.927)
OP2: (-88.149,-66.954,9.084)
C3': (-89.006,-63.748,13.005)
C1': (-89.017,-65.301,14.757)
C5': (-87.471,-65.327,11.630)
O4': (-88.699,-66.024,13.599)
C8: (-87.005,-66.221,15.921)
O2': (-89.242,-62.988,15.334)
C6: (-88.072,-67.580,18.880)
C5: (-87.828,-66.997,17.672)
C4: (-88.876,-66.454,16.984)
P: (-87.001,-67.281,9.927)
C4': (-88.735,-65.145,12.448)
C2': (-88.599,-63.881,14.470)
C2: (-90.269,-66.986,18.500)
N1: (-89.349,-67.539,19.276)
N3: (-90.142,-66.414,17.334)
N6: (-87.097,-68.133,19.622)
N7: (-86.647,-66.853,17.010)
N9: (-88.325,-65.926,15.861)
O5': (-87.198,-66.707,11.396)
O3': (-90.403,-63.491,12.927)
OP1: (-83.622,-69.115,13.984)
OP2: (-81.505,-67.787,13.899)
C3': (-84.461,-66.874,9.534)
C1': (-83.673,-64.985,8.531)
C5': (-82.633,-66.663,11.304)
O6: (-80.642,-61.540,4.909)
O4': (-83.283,-64.869,9.858)
C8: (-81.420,-64.602,7.570)
C2: (-84.095,-61.560,5.986)
C6: (-81.692,-61.880,5.474)
C5: (-81.810,-62.943,6.363)
C4: (-83.008,-63.210,6.945)
P: (-82.905,-67.938,13.532)
C4': (-83.772,-66.016,10.576)
C2': (-83.745,-66.469,8.290)
O2': (-84.456,-66.757,7.120)
N1: (-82.922,-61.220,5.331)
N2: (-85.159,-60.784,5.692)
N3: (-84.195,-62.583,6.826)
N7: (-80.828,-63.800,6.759)
N9: (-82.721,-64.288,7.710)
O5': (-83.055,-67.821,11.986)
O3': (-85.786,-66.426,9.399)
OP2: (-81.505,-67.787,13.899)
C3': (-84.461,-66.874,9.534)
C1': (-83.673,-64.985,8.531)
C5': (-82.633,-66.663,11.304)
O6: (-80.642,-61.540,4.909)
O4': (-83.283,-64.869,9.858)
C8: (-81.420,-64.602,7.570)
C2: (-84.095,-61.560,5.986)
C6: (-81.692,-61.880,5.474)
C5: (-81.810,-62.943,6.363)
C4: (-83.008,-63.210,6.945)
P: (-82.905,-67.938,13.532)
C4': (-83.772,-66.016,10.576)
C2': (-83.745,-66.469,8.290)
O2': (-84.456,-66.757,7.120)
N1: (-82.922,-61.220,5.331)
N2: (-85.159,-60.784,5.692)
N3: (-84.195,-62.583,6.826)
N7: (-80.828,-63.800,6.759)
N9: (-82.721,-64.288,7.710)
O5': (-83.055,-67.821,11.986)
O3': (-85.786,-66.426,9.399)
Image (generated by PyMOL):