Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1427:A1551
Extra
PDB:
ATOM 1 O3' A A1426 -20.236 -10.847 0.947 1.00 0.01 O
ATOM 2 P A A1427 -19.561 -11.959 0.012 1.00 15.24 P
ATOM 3 OP1 A A1427 -19.735 -11.515 -1.409 1.00 15.24 O
ATOM 4 OP2 A A1427 -20.093 -13.277 0.428 1.00 15.24 O
ATOM 5 O5' A A1427 -18.044 -11.860 0.419 1.00 15.24 O
ATOM 6 C5' A A1427 -17.405 -10.605 0.508 1.00 15.24 C
ATOM 7 C4' A A1427 -16.266 -10.653 1.482 1.00 15.24 C
ATOM 8 O4' A A1427 -16.714 -11.117 2.770 1.00 15.24 O
ATOM 9 C3' A A1427 -15.130 -11.590 1.105 1.00 15.24 C
ATOM 10 O3' A A1427 -14.145 -10.905 0.349 1.00 15.24 O
ATOM 11 C2' A A1427 -14.605 -12.129 2.451 1.00 15.24 C
ATOM 12 O2' A A1427 -13.326 -11.593 2.742 1.00 15.24 O
ATOM 13 C1' A A1427 -15.608 -11.582 3.471 1.00 15.24 C
ATOM 14 N9 A A1427 -16.017 -12.560 4.484 1.00 15.48 N
ATOM 15 C8 A A1427 -16.980 -13.529 4.560 1.00 15.48 C
ATOM 16 N7 A A1427 -16.999 -14.140 5.734 1.00 15.48 N
ATOM 17 C5 A A1427 -15.979 -13.524 6.456 1.00 15.48 C
ATOM 18 C6 A A1427 -15.452 -13.695 7.748 1.00 15.48 C
ATOM 19 N6 A A1427 -15.881 -14.586 8.660 1.00 15.48 N
ATOM 20 N1 A A1427 -14.435 -12.894 8.104 1.00 15.48 N
ATOM 21 C2 A A1427 -13.983 -11.991 7.249 1.00 15.48 C
ATOM 22 N3 A A1427 -14.379 -11.737 6.016 1.00 15.48 N
ATOM 23 C4 A A1427 -15.383 -12.552 5.688 1.00 15.48 C
ATOM 24 P G A1428 -13.015 -11.705 -0.456 1.00 15.21 P
ATOM 25 OP1 G A1428 -12.620 -10.823 -1.597 1.00 15.21 O
ATOM 26 OP2 G A1428 -13.548 -13.087 -0.741 1.00 15.21 O
ATOM 27 O5' G A1428 -11.827 -11.800 0.600 1.00 15.21 O
TER
ATOM 1 O3' C B1550 -9.519 -16.209 16.338 1.00 4.20 O
ATOM 2 P C B1551 -10.803 -15.509 16.965 1.00 3.21 P
ATOM 3 OP1 C B1551 -11.069 -14.284 16.166 1.00 3.21 O
ATOM 4 OP2 C B1551 -10.555 -15.379 18.421 1.00 3.21 O
ATOM 5 O5' C B1551 -11.946 -16.585 16.699 1.00 3.21 O
ATOM 6 C5' C B1551 -13.048 -16.709 17.580 1.00 3.21 C
ATOM 7 C4' C B1551 -14.336 -16.903 16.833 1.00 3.21 C
ATOM 8 O4' C B1551 -14.450 -15.885 15.803 1.00 3.21 O
ATOM 9 C3' C B1551 -14.485 -18.251 16.141 1.00 3.21 C
ATOM 10 O3' C B1551 -15.804 -18.749 16.344 1.00 3.21 O
ATOM 11 C2' C B1551 -14.263 -17.923 14.659 1.00 3.21 C
ATOM 12 O2' C B1551 -14.959 -18.750 13.754 1.00 3.21 O
ATOM 13 C1' C B1551 -14.734 -16.479 14.557 1.00 3.21 C
ATOM 14 N1 C B1551 -14.028 -15.719 13.514 1.00 3.53 N
ATOM 15 C2 C B1551 -14.554 -15.595 12.235 1.00 3.53 C
ATOM 16 O2 C B1551 -15.644 -16.096 11.994 1.00 3.53 O
ATOM 17 N3 C B1551 -13.873 -14.933 11.282 1.00 3.53 N
ATOM 18 C4 C B1551 -12.668 -14.426 11.556 1.00 3.53 C
ATOM 19 N4 C B1551 -11.990 -13.767 10.593 1.00 3.53 N
ATOM 20 C5 C B1551 -12.088 -14.567 12.851 1.00 3.53 C
ATOM 21 C6 C B1551 -12.793 -15.213 13.780 1.00 3.53 C
ATOM 22 P U B1552 -16.301 -19.155 17.819 1.00 26.18 P
ATOM 23 OP1 U B1552 -15.158 -19.803 18.496 1.00 26.18 O
ATOM 24 OP2 U B1552 -17.557 -19.915 17.657 1.00 26.18 O
ATOM 25 O5' U B1552 -16.612 -17.756 18.500 1.00 26.18 O
TER
ATOM 2 P A A1427 -19.561 -11.959 0.012 1.00 15.24 P
ATOM 3 OP1 A A1427 -19.735 -11.515 -1.409 1.00 15.24 O
ATOM 4 OP2 A A1427 -20.093 -13.277 0.428 1.00 15.24 O
ATOM 5 O5' A A1427 -18.044 -11.860 0.419 1.00 15.24 O
ATOM 6 C5' A A1427 -17.405 -10.605 0.508 1.00 15.24 C
ATOM 7 C4' A A1427 -16.266 -10.653 1.482 1.00 15.24 C
ATOM 8 O4' A A1427 -16.714 -11.117 2.770 1.00 15.24 O
ATOM 9 C3' A A1427 -15.130 -11.590 1.105 1.00 15.24 C
ATOM 10 O3' A A1427 -14.145 -10.905 0.349 1.00 15.24 O
ATOM 11 C2' A A1427 -14.605 -12.129 2.451 1.00 15.24 C
ATOM 12 O2' A A1427 -13.326 -11.593 2.742 1.00 15.24 O
ATOM 13 C1' A A1427 -15.608 -11.582 3.471 1.00 15.24 C
ATOM 14 N9 A A1427 -16.017 -12.560 4.484 1.00 15.48 N
ATOM 15 C8 A A1427 -16.980 -13.529 4.560 1.00 15.48 C
ATOM 16 N7 A A1427 -16.999 -14.140 5.734 1.00 15.48 N
ATOM 17 C5 A A1427 -15.979 -13.524 6.456 1.00 15.48 C
ATOM 18 C6 A A1427 -15.452 -13.695 7.748 1.00 15.48 C
ATOM 19 N6 A A1427 -15.881 -14.586 8.660 1.00 15.48 N
ATOM 20 N1 A A1427 -14.435 -12.894 8.104 1.00 15.48 N
ATOM 21 C2 A A1427 -13.983 -11.991 7.249 1.00 15.48 C
ATOM 22 N3 A A1427 -14.379 -11.737 6.016 1.00 15.48 N
ATOM 23 C4 A A1427 -15.383 -12.552 5.688 1.00 15.48 C
ATOM 24 P G A1428 -13.015 -11.705 -0.456 1.00 15.21 P
ATOM 25 OP1 G A1428 -12.620 -10.823 -1.597 1.00 15.21 O
ATOM 26 OP2 G A1428 -13.548 -13.087 -0.741 1.00 15.21 O
ATOM 27 O5' G A1428 -11.827 -11.800 0.600 1.00 15.21 O
TER
ATOM 1 O3' C B1550 -9.519 -16.209 16.338 1.00 4.20 O
ATOM 2 P C B1551 -10.803 -15.509 16.965 1.00 3.21 P
ATOM 3 OP1 C B1551 -11.069 -14.284 16.166 1.00 3.21 O
ATOM 4 OP2 C B1551 -10.555 -15.379 18.421 1.00 3.21 O
ATOM 5 O5' C B1551 -11.946 -16.585 16.699 1.00 3.21 O
ATOM 6 C5' C B1551 -13.048 -16.709 17.580 1.00 3.21 C
ATOM 7 C4' C B1551 -14.336 -16.903 16.833 1.00 3.21 C
ATOM 8 O4' C B1551 -14.450 -15.885 15.803 1.00 3.21 O
ATOM 9 C3' C B1551 -14.485 -18.251 16.141 1.00 3.21 C
ATOM 10 O3' C B1551 -15.804 -18.749 16.344 1.00 3.21 O
ATOM 11 C2' C B1551 -14.263 -17.923 14.659 1.00 3.21 C
ATOM 12 O2' C B1551 -14.959 -18.750 13.754 1.00 3.21 O
ATOM 13 C1' C B1551 -14.734 -16.479 14.557 1.00 3.21 C
ATOM 14 N1 C B1551 -14.028 -15.719 13.514 1.00 3.53 N
ATOM 15 C2 C B1551 -14.554 -15.595 12.235 1.00 3.53 C
ATOM 16 O2 C B1551 -15.644 -16.096 11.994 1.00 3.53 O
ATOM 17 N3 C B1551 -13.873 -14.933 11.282 1.00 3.53 N
ATOM 18 C4 C B1551 -12.668 -14.426 11.556 1.00 3.53 C
ATOM 19 N4 C B1551 -11.990 -13.767 10.593 1.00 3.53 N
ATOM 20 C5 C B1551 -12.088 -14.567 12.851 1.00 3.53 C
ATOM 21 C6 C B1551 -12.793 -15.213 13.780 1.00 3.53 C
ATOM 22 P U B1552 -16.301 -19.155 17.819 1.00 26.18 P
ATOM 23 OP1 U B1552 -15.158 -19.803 18.496 1.00 26.18 O
ATOM 24 OP2 U B1552 -17.557 -19.915 17.657 1.00 26.18 O
ATOM 25 O5' U B1552 -16.612 -17.756 18.500 1.00 26.18 O
TER
Atoms:
OP1: (-19.735,-11.515,-1.409)
OP2: (-20.093,-13.277,0.428)
C3': (-15.130,-11.590,1.105)
C1': (-15.608,-11.582,3.471)
C5': (-17.405,-10.605,0.508)
O4': (-16.714,-11.117,2.770)
C8: (-16.980,-13.529,4.560)
O2': (-13.326,-11.593,2.742)
C6: (-15.452,-13.695,7.748)
C5: (-15.979,-13.524,6.456)
C4: (-15.383,-12.552,5.688)
P: (-19.561,-11.959,0.012)
C4': (-16.266,-10.653,1.482)
C2': (-14.605,-12.129,2.451)
C2: (-13.983,-11.991,7.249)
N1: (-14.435,-12.894,8.104)
N3: (-14.379,-11.737,6.016)
N6: (-15.881,-14.586,8.660)
N7: (-16.999,-14.140,5.734)
N9: (-16.017,-12.560,4.484)
O5': (-18.044,-11.860,0.419)
O3': (-14.145,-10.905,0.349)
OP2: (-20.093,-13.277,0.428)
C3': (-15.130,-11.590,1.105)
C1': (-15.608,-11.582,3.471)
C5': (-17.405,-10.605,0.508)
O4': (-16.714,-11.117,2.770)
C8: (-16.980,-13.529,4.560)
O2': (-13.326,-11.593,2.742)
C6: (-15.452,-13.695,7.748)
C5: (-15.979,-13.524,6.456)
C4: (-15.383,-12.552,5.688)
P: (-19.561,-11.959,0.012)
C4': (-16.266,-10.653,1.482)
C2': (-14.605,-12.129,2.451)
C2: (-13.983,-11.991,7.249)
N1: (-14.435,-12.894,8.104)
N3: (-14.379,-11.737,6.016)
N6: (-15.881,-14.586,8.660)
N7: (-16.999,-14.140,5.734)
N9: (-16.017,-12.560,4.484)
O5': (-18.044,-11.860,0.419)
O3': (-14.145,-10.905,0.349)
C2: (-14.554,-15.595,12.235)
OP1: (-11.069,-14.284,16.166)
OP2: (-10.555,-15.379,18.421)
C4: (-12.668,-14.426,11.556)
O5': (-11.946,-16.585,16.699)
C3': (-14.485,-18.251,16.141)
C1': (-14.734,-16.479,14.557)
O4': (-14.450,-15.885,15.803)
C5': (-13.048,-16.709,17.580)
P: (-10.803,-15.509,16.965)
O2: (-15.644,-16.096,11.994)
C4': (-14.336,-16.903,16.833)
C2': (-14.263,-17.923,14.659)
O2': (-14.959,-18.750,13.754)
N1: (-14.028,-15.719,13.514)
N3: (-13.873,-14.933,11.282)
N4: (-11.990,-13.767,10.593)
C6: (-12.793,-15.213,13.780)
C5: (-12.088,-14.567,12.851)
O3': (-15.804,-18.749,16.344)
OP1: (-11.069,-14.284,16.166)
OP2: (-10.555,-15.379,18.421)
C4: (-12.668,-14.426,11.556)
O5': (-11.946,-16.585,16.699)
C3': (-14.485,-18.251,16.141)
C1': (-14.734,-16.479,14.557)
O4': (-14.450,-15.885,15.803)
C5': (-13.048,-16.709,17.580)
P: (-10.803,-15.509,16.965)
O2: (-15.644,-16.096,11.994)
C4': (-14.336,-16.903,16.833)
C2': (-14.263,-17.923,14.659)
O2': (-14.959,-18.750,13.754)
N1: (-14.028,-15.719,13.514)
N3: (-13.873,-14.933,11.282)
N4: (-11.990,-13.767,10.593)
C6: (-12.793,-15.213,13.780)
C5: (-12.088,-14.567,12.851)
O3': (-15.804,-18.749,16.344)
Image (generated by PyMOL):