Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11840:12146
Extra
PDB:
ATOM 1 O3' A A1839 8.377 49.725 64.298 1.00 46.68 O
ATOM 2 P A A1840 6.843 49.272 64.525 1.00 49.83 P
ATOM 3 OP1 A A1840 6.420 49.723 65.845 1.00 50.07 O
ATOM 4 OP2 A A1840 6.772 47.857 64.224 1.00 49.32 O
ATOM 5 O5' A A1840 6.068 50.088 63.433 1.00 50.30 O
ATOM 6 C5' A A1840 6.176 51.497 63.356 1.00 50.83 C
ATOM 7 C4' A A1840 6.100 51.913 61.935 1.00 51.04 C
ATOM 8 O4' A A1840 7.353 51.582 61.294 1.00 50.69 O
ATOM 9 C3' A A1840 5.041 51.176 61.140 1.00 50.98 C
ATOM 10 O3' A A1840 3.794 51.851 61.167 1.00 51.49 O
ATOM 11 C2' A A1840 5.645 51.053 59.751 1.00 50.87 C
ATOM 12 O2' A A1840 5.421 52.232 59.022 1.00 51.41 O
ATOM 13 C1' A A1840 7.132 50.996 60.051 1.00 50.55 C
ATOM 14 N9 A A1840 7.705 49.634 60.067 1.00 49.93 N
ATOM 15 C8 A A1840 8.417 49.115 61.117 1.00 49.56 C
ATOM 16 N7 A A1840 8.904 47.921 60.870 1.00 49.04 N
ATOM 17 C5 A A1840 8.529 47.648 59.563 1.00 49.06 C
ATOM 18 C6 A A1840 8.763 46.534 58.729 1.00 48.66 C
ATOM 19 N6 A A1840 9.479 45.441 59.081 1.00 48.13 N
ATOM 20 N1 A A1840 8.211 46.585 57.502 1.00 48.84 N
ATOM 21 C2 A A1840 7.514 47.667 57.146 1.00 49.38 C
ATOM 22 N3 A A1840 7.258 48.769 57.818 1.00 49.79 N
ATOM 23 C4 A A1840 7.794 48.698 59.043 1.00 49.60 C
ATOM 24 P G A1841 2.497 51.172 61.837 1.00 52.49 P
ATOM 25 OP1 G A1841 1.442 52.202 61.845 1.00 53.12 O
ATOM 26 OP2 G A1841 2.906 50.558 63.109 1.00 52.13 O
ATOM 27 O5' G A1841 2.124 50.062 60.787 1.00 52.18 O
TER
ATOM 1 O3' C B2145 10.250 37.633 53.302 1.00 41.62 O
ATOM 2 P C B2146 11.303 38.612 52.602 1.00 46.37 P
ATOM 3 OP1 C B2146 10.571 39.808 52.080 1.00 46.91 O
ATOM 4 OP2 C B2146 12.067 37.784 51.651 1.00 46.08 O
ATOM 5 O5' C B2146 12.244 39.041 53.777 1.00 46.25 O
ATOM 6 C5' C B2146 13.631 39.158 53.547 1.00 46.08 C
ATOM 7 C4' C B2146 14.300 39.705 54.734 1.00 46.05 C
ATOM 8 O4' C B2146 13.712 40.979 55.017 1.00 46.53 O
ATOM 9 C3' C B2146 14.129 38.873 55.980 1.00 45.74 C
ATOM 10 O3' C B2146 15.319 38.961 56.759 1.00 45.54 O
ATOM 11 C2' C B2146 12.957 39.561 56.694 1.00 46.09 C
ATOM 12 O2' C B2146 12.929 39.408 58.096 1.00 45.97 O
ATOM 13 C1' C B2146 13.155 41.003 56.296 1.00 46.54 C
ATOM 14 N1 C B2146 11.911 41.781 56.201 1.00 46.99 N
ATOM 15 C2 C B2146 11.604 42.637 57.257 1.00 47.26 C
ATOM 16 O2 C B2146 12.437 42.600 58.221 1.00 47.06 O
ATOM 17 N3 C B2146 10.452 43.413 57.177 1.00 47.72 N
ATOM 18 C4 C B2146 9.673 43.351 56.085 1.00 47.90 C
ATOM 19 N4 C B2146 8.592 44.111 55.994 1.00 48.36 N
ATOM 20 C5 C B2146 9.998 42.493 55.009 1.00 47.63 C
ATOM 21 C6 C B2146 11.106 41.748 55.088 1.00 47.19 C
ATOM 22 P U B2147 16.665 38.218 56.285 1.00 43.66 P
ATOM 23 OP1 U B2147 16.389 37.481 55.053 1.00 43.56 O
ATOM 24 OP2 U B2147 17.168 37.484 57.461 1.00 43.30 O
ATOM 25 O5' U B2147 17.608 39.438 55.948 1.00 43.92 O
TER
ATOM 2 P A A1840 6.843 49.272 64.525 1.00 49.83 P
ATOM 3 OP1 A A1840 6.420 49.723 65.845 1.00 50.07 O
ATOM 4 OP2 A A1840 6.772 47.857 64.224 1.00 49.32 O
ATOM 5 O5' A A1840 6.068 50.088 63.433 1.00 50.30 O
ATOM 6 C5' A A1840 6.176 51.497 63.356 1.00 50.83 C
ATOM 7 C4' A A1840 6.100 51.913 61.935 1.00 51.04 C
ATOM 8 O4' A A1840 7.353 51.582 61.294 1.00 50.69 O
ATOM 9 C3' A A1840 5.041 51.176 61.140 1.00 50.98 C
ATOM 10 O3' A A1840 3.794 51.851 61.167 1.00 51.49 O
ATOM 11 C2' A A1840 5.645 51.053 59.751 1.00 50.87 C
ATOM 12 O2' A A1840 5.421 52.232 59.022 1.00 51.41 O
ATOM 13 C1' A A1840 7.132 50.996 60.051 1.00 50.55 C
ATOM 14 N9 A A1840 7.705 49.634 60.067 1.00 49.93 N
ATOM 15 C8 A A1840 8.417 49.115 61.117 1.00 49.56 C
ATOM 16 N7 A A1840 8.904 47.921 60.870 1.00 49.04 N
ATOM 17 C5 A A1840 8.529 47.648 59.563 1.00 49.06 C
ATOM 18 C6 A A1840 8.763 46.534 58.729 1.00 48.66 C
ATOM 19 N6 A A1840 9.479 45.441 59.081 1.00 48.13 N
ATOM 20 N1 A A1840 8.211 46.585 57.502 1.00 48.84 N
ATOM 21 C2 A A1840 7.514 47.667 57.146 1.00 49.38 C
ATOM 22 N3 A A1840 7.258 48.769 57.818 1.00 49.79 N
ATOM 23 C4 A A1840 7.794 48.698 59.043 1.00 49.60 C
ATOM 24 P G A1841 2.497 51.172 61.837 1.00 52.49 P
ATOM 25 OP1 G A1841 1.442 52.202 61.845 1.00 53.12 O
ATOM 26 OP2 G A1841 2.906 50.558 63.109 1.00 52.13 O
ATOM 27 O5' G A1841 2.124 50.062 60.787 1.00 52.18 O
TER
ATOM 1 O3' C B2145 10.250 37.633 53.302 1.00 41.62 O
ATOM 2 P C B2146 11.303 38.612 52.602 1.00 46.37 P
ATOM 3 OP1 C B2146 10.571 39.808 52.080 1.00 46.91 O
ATOM 4 OP2 C B2146 12.067 37.784 51.651 1.00 46.08 O
ATOM 5 O5' C B2146 12.244 39.041 53.777 1.00 46.25 O
ATOM 6 C5' C B2146 13.631 39.158 53.547 1.00 46.08 C
ATOM 7 C4' C B2146 14.300 39.705 54.734 1.00 46.05 C
ATOM 8 O4' C B2146 13.712 40.979 55.017 1.00 46.53 O
ATOM 9 C3' C B2146 14.129 38.873 55.980 1.00 45.74 C
ATOM 10 O3' C B2146 15.319 38.961 56.759 1.00 45.54 O
ATOM 11 C2' C B2146 12.957 39.561 56.694 1.00 46.09 C
ATOM 12 O2' C B2146 12.929 39.408 58.096 1.00 45.97 O
ATOM 13 C1' C B2146 13.155 41.003 56.296 1.00 46.54 C
ATOM 14 N1 C B2146 11.911 41.781 56.201 1.00 46.99 N
ATOM 15 C2 C B2146 11.604 42.637 57.257 1.00 47.26 C
ATOM 16 O2 C B2146 12.437 42.600 58.221 1.00 47.06 O
ATOM 17 N3 C B2146 10.452 43.413 57.177 1.00 47.72 N
ATOM 18 C4 C B2146 9.673 43.351 56.085 1.00 47.90 C
ATOM 19 N4 C B2146 8.592 44.111 55.994 1.00 48.36 N
ATOM 20 C5 C B2146 9.998 42.493 55.009 1.00 47.63 C
ATOM 21 C6 C B2146 11.106 41.748 55.088 1.00 47.19 C
ATOM 22 P U B2147 16.665 38.218 56.285 1.00 43.66 P
ATOM 23 OP1 U B2147 16.389 37.481 55.053 1.00 43.56 O
ATOM 24 OP2 U B2147 17.168 37.484 57.461 1.00 43.30 O
ATOM 25 O5' U B2147 17.608 39.438 55.948 1.00 43.92 O
TER
Atoms:
OP1: (6.420,49.723,65.845)
OP2: (6.772,47.857,64.224)
C3': (5.041,51.176,61.140)
C1': (7.132,50.996,60.051)
C5': (6.176,51.497,63.356)
O4': (7.353,51.582,61.294)
C8: (8.417,49.115,61.117)
O2': (5.421,52.232,59.022)
C6: (8.763,46.534,58.729)
C5: (8.529,47.648,59.563)
C4: (7.794,48.698,59.043)
P: (6.843,49.272,64.525)
C4': (6.100,51.913,61.935)
C2': (5.645,51.053,59.751)
C2: (7.514,47.667,57.146)
N1: (8.211,46.585,57.502)
N3: (7.258,48.769,57.818)
N6: (9.479,45.441,59.081)
N7: (8.904,47.921,60.870)
N9: (7.705,49.634,60.067)
O5': (6.068,50.088,63.433)
O3': (3.794,51.851,61.167)
OP2: (6.772,47.857,64.224)
C3': (5.041,51.176,61.140)
C1': (7.132,50.996,60.051)
C5': (6.176,51.497,63.356)
O4': (7.353,51.582,61.294)
C8: (8.417,49.115,61.117)
O2': (5.421,52.232,59.022)
C6: (8.763,46.534,58.729)
C5: (8.529,47.648,59.563)
C4: (7.794,48.698,59.043)
P: (6.843,49.272,64.525)
C4': (6.100,51.913,61.935)
C2': (5.645,51.053,59.751)
C2: (7.514,47.667,57.146)
N1: (8.211,46.585,57.502)
N3: (7.258,48.769,57.818)
N6: (9.479,45.441,59.081)
N7: (8.904,47.921,60.870)
N9: (7.705,49.634,60.067)
O5': (6.068,50.088,63.433)
O3': (3.794,51.851,61.167)
C2: (11.604,42.637,57.257)
OP1: (10.571,39.808,52.080)
OP2: (12.067,37.784,51.651)
C4: (9.673,43.351,56.085)
O5': (12.244,39.041,53.777)
C3': (14.129,38.873,55.980)
C1': (13.155,41.003,56.296)
O4': (13.712,40.979,55.017)
C5': (13.631,39.158,53.547)
P: (11.303,38.612,52.602)
O2: (12.437,42.600,58.221)
C4': (14.300,39.705,54.734)
C2': (12.957,39.561,56.694)
O2': (12.929,39.408,58.096)
N1: (11.911,41.781,56.201)
N3: (10.452,43.413,57.177)
N4: (8.592,44.111,55.994)
C6: (11.106,41.748,55.088)
C5: (9.998,42.493,55.009)
O3': (15.319,38.961,56.759)
OP1: (10.571,39.808,52.080)
OP2: (12.067,37.784,51.651)
C4: (9.673,43.351,56.085)
O5': (12.244,39.041,53.777)
C3': (14.129,38.873,55.980)
C1': (13.155,41.003,56.296)
O4': (13.712,40.979,55.017)
C5': (13.631,39.158,53.547)
P: (11.303,38.612,52.602)
O2: (12.437,42.600,58.221)
C4': (14.300,39.705,54.734)
C2': (12.957,39.561,56.694)
O2': (12.929,39.408,58.096)
N1: (11.911,41.781,56.201)
N3: (10.452,43.413,57.177)
N4: (8.592,44.111,55.994)
C6: (11.106,41.748,55.088)
C5: (9.998,42.493,55.009)
O3': (15.319,38.961,56.759)
Image (generated by PyMOL):