Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A53:A366
Extra
PDB:
ATOM 1 O3' C A 52 -64.545 -14.468 -69.784 1.00 22.98 O
ATOM 2 P A A 53 -64.346 -14.392 -71.382 1.00 24.31 P
ATOM 3 OP1 A A 53 -63.316 -15.402 -71.756 1.00 24.31 O
ATOM 4 OP2 A A 53 -64.089 -12.983 -71.692 1.00 24.31 O
ATOM 5 O5' A A 53 -65.775 -14.831 -71.968 1.00 24.31 O
ATOM 6 C5' A A 53 -66.284 -16.144 -71.735 1.00 24.31 C
ATOM 7 C4' A A 53 -67.105 -16.665 -72.899 1.00 24.31 C
ATOM 8 O4' A A 53 -68.443 -16.123 -72.838 1.00 24.31 O
ATOM 9 C3' A A 53 -66.606 -16.317 -74.292 1.00 24.31 C
ATOM 10 O3' A A 53 -65.639 -17.229 -74.759 1.00 24.31 O
ATOM 11 C2' A A 53 -67.876 -16.319 -75.130 1.00 24.31 C
ATOM 12 O2' A A 53 -68.210 -17.628 -75.547 1.00 24.31 O
ATOM 13 C1' A A 53 -68.921 -15.848 -74.131 1.00 24.31 C
ATOM 14 N9 A A 53 -69.170 -14.402 -74.231 1.00 25.26 N
ATOM 15 C8 A A 53 -68.956 -13.475 -73.255 1.00 25.26 C
ATOM 16 N7 A A 53 -69.282 -12.265 -73.618 1.00 25.26 N
ATOM 17 C5 A A 53 -69.739 -12.393 -74.908 1.00 25.26 C
ATOM 18 C6 A A 53 -70.224 -11.448 -75.833 1.00 25.26 C
ATOM 19 N6 A A 53 -70.340 -10.137 -75.613 1.00 25.26 N
ATOM 20 N1 A A 53 -70.579 -11.909 -77.045 1.00 25.26 N
ATOM 21 C2 A A 53 -70.459 -13.233 -77.274 1.00 25.26 C
ATOM 22 N3 A A 53 -70.019 -14.213 -76.476 1.00 25.26 N
ATOM 23 C4 A A 53 -69.669 -13.712 -75.294 1.00 25.26 C
ATOM 24 P U A 54 -64.397 -16.720 -75.643 1.00 22.50 P
ATOM 25 OP1 U A 54 -63.666 -17.921 -76.096 1.00 22.50 O
ATOM 26 OP2 U A 54 -63.669 -15.708 -74.824 1.00 22.50 O
ATOM 27 O5' U A 54 -65.099 -16.032 -76.891 1.00 22.50 O
TER
ATOM 1 O3' U B 365 -76.653 -3.109 -80.535 1.00 27.81 O
ATOM 2 P U B 366 -77.137 -4.632 -80.539 1.00 17.00 P
ATOM 3 OP1 U B 366 -77.892 -4.859 -81.800 1.00 17.00 O
ATOM 4 OP2 U B 366 -77.823 -4.850 -79.250 1.00 17.00 O
ATOM 5 O5' U B 366 -75.763 -5.446 -80.567 1.00 17.00 O
ATOM 6 C5' U B 366 -74.722 -5.149 -81.503 1.00 17.00 C
ATOM 7 C4' U B 366 -73.360 -5.385 -80.884 1.00 17.00 C
ATOM 8 O4' U B 366 -73.336 -6.644 -80.186 1.00 17.00 O
ATOM 9 C3' U B 366 -72.165 -5.468 -81.823 1.00 17.00 C
ATOM 10 O3' U B 366 -71.707 -4.177 -82.214 1.00 17.00 O
ATOM 11 C2' U B 366 -71.129 -6.277 -81.006 1.00 17.00 C
ATOM 12 O2' U B 366 -70.240 -5.424 -80.294 1.00 17.00 O
ATOM 13 C1' U B 366 -72.000 -7.025 -79.987 1.00 17.00 C
ATOM 14 N1 U B 366 -71.899 -8.481 -80.089 1.00 17.99 N
ATOM 15 C2 U B 366 -71.246 -9.186 -79.068 1.00 17.99 C
ATOM 16 O2 U B 366 -70.693 -8.698 -78.103 1.00 17.99 O
ATOM 17 N3 U B 366 -71.228 -10.542 -79.211 1.00 17.99 N
ATOM 18 C4 U B 366 -71.803 -11.241 -80.247 1.00 17.99 C
ATOM 19 O4 U B 366 -71.721 -12.466 -80.251 1.00 17.99 O
ATOM 20 C5 U B 366 -72.472 -10.452 -81.242 1.00 17.99 C
ATOM 21 C6 U B 366 -72.510 -9.123 -81.125 1.00 17.99 C
ATOM 22 P G B 367 -70.558 -3.996 -83.329 1.00 23.12 P
ATOM 23 OP1 G B 367 -70.145 -5.345 -83.770 1.00 23.12 O
ATOM 24 OP2 G B 367 -69.540 -3.104 -82.755 1.00 23.12 O
ATOM 25 O5' G B 367 -71.321 -3.245 -84.506 1.00 23.12 O
TER
ATOM 2 P A A 53 -64.346 -14.392 -71.382 1.00 24.31 P
ATOM 3 OP1 A A 53 -63.316 -15.402 -71.756 1.00 24.31 O
ATOM 4 OP2 A A 53 -64.089 -12.983 -71.692 1.00 24.31 O
ATOM 5 O5' A A 53 -65.775 -14.831 -71.968 1.00 24.31 O
ATOM 6 C5' A A 53 -66.284 -16.144 -71.735 1.00 24.31 C
ATOM 7 C4' A A 53 -67.105 -16.665 -72.899 1.00 24.31 C
ATOM 8 O4' A A 53 -68.443 -16.123 -72.838 1.00 24.31 O
ATOM 9 C3' A A 53 -66.606 -16.317 -74.292 1.00 24.31 C
ATOM 10 O3' A A 53 -65.639 -17.229 -74.759 1.00 24.31 O
ATOM 11 C2' A A 53 -67.876 -16.319 -75.130 1.00 24.31 C
ATOM 12 O2' A A 53 -68.210 -17.628 -75.547 1.00 24.31 O
ATOM 13 C1' A A 53 -68.921 -15.848 -74.131 1.00 24.31 C
ATOM 14 N9 A A 53 -69.170 -14.402 -74.231 1.00 25.26 N
ATOM 15 C8 A A 53 -68.956 -13.475 -73.255 1.00 25.26 C
ATOM 16 N7 A A 53 -69.282 -12.265 -73.618 1.00 25.26 N
ATOM 17 C5 A A 53 -69.739 -12.393 -74.908 1.00 25.26 C
ATOM 18 C6 A A 53 -70.224 -11.448 -75.833 1.00 25.26 C
ATOM 19 N6 A A 53 -70.340 -10.137 -75.613 1.00 25.26 N
ATOM 20 N1 A A 53 -70.579 -11.909 -77.045 1.00 25.26 N
ATOM 21 C2 A A 53 -70.459 -13.233 -77.274 1.00 25.26 C
ATOM 22 N3 A A 53 -70.019 -14.213 -76.476 1.00 25.26 N
ATOM 23 C4 A A 53 -69.669 -13.712 -75.294 1.00 25.26 C
ATOM 24 P U A 54 -64.397 -16.720 -75.643 1.00 22.50 P
ATOM 25 OP1 U A 54 -63.666 -17.921 -76.096 1.00 22.50 O
ATOM 26 OP2 U A 54 -63.669 -15.708 -74.824 1.00 22.50 O
ATOM 27 O5' U A 54 -65.099 -16.032 -76.891 1.00 22.50 O
TER
ATOM 1 O3' U B 365 -76.653 -3.109 -80.535 1.00 27.81 O
ATOM 2 P U B 366 -77.137 -4.632 -80.539 1.00 17.00 P
ATOM 3 OP1 U B 366 -77.892 -4.859 -81.800 1.00 17.00 O
ATOM 4 OP2 U B 366 -77.823 -4.850 -79.250 1.00 17.00 O
ATOM 5 O5' U B 366 -75.763 -5.446 -80.567 1.00 17.00 O
ATOM 6 C5' U B 366 -74.722 -5.149 -81.503 1.00 17.00 C
ATOM 7 C4' U B 366 -73.360 -5.385 -80.884 1.00 17.00 C
ATOM 8 O4' U B 366 -73.336 -6.644 -80.186 1.00 17.00 O
ATOM 9 C3' U B 366 -72.165 -5.468 -81.823 1.00 17.00 C
ATOM 10 O3' U B 366 -71.707 -4.177 -82.214 1.00 17.00 O
ATOM 11 C2' U B 366 -71.129 -6.277 -81.006 1.00 17.00 C
ATOM 12 O2' U B 366 -70.240 -5.424 -80.294 1.00 17.00 O
ATOM 13 C1' U B 366 -72.000 -7.025 -79.987 1.00 17.00 C
ATOM 14 N1 U B 366 -71.899 -8.481 -80.089 1.00 17.99 N
ATOM 15 C2 U B 366 -71.246 -9.186 -79.068 1.00 17.99 C
ATOM 16 O2 U B 366 -70.693 -8.698 -78.103 1.00 17.99 O
ATOM 17 N3 U B 366 -71.228 -10.542 -79.211 1.00 17.99 N
ATOM 18 C4 U B 366 -71.803 -11.241 -80.247 1.00 17.99 C
ATOM 19 O4 U B 366 -71.721 -12.466 -80.251 1.00 17.99 O
ATOM 20 C5 U B 366 -72.472 -10.452 -81.242 1.00 17.99 C
ATOM 21 C6 U B 366 -72.510 -9.123 -81.125 1.00 17.99 C
ATOM 22 P G B 367 -70.558 -3.996 -83.329 1.00 23.12 P
ATOM 23 OP1 G B 367 -70.145 -5.345 -83.770 1.00 23.12 O
ATOM 24 OP2 G B 367 -69.540 -3.104 -82.755 1.00 23.12 O
ATOM 25 O5' G B 367 -71.321 -3.245 -84.506 1.00 23.12 O
TER
Atoms:
OP1: (-63.316,-15.402,-71.756)
OP2: (-64.089,-12.983,-71.692)
C3': (-66.606,-16.317,-74.292)
C1': (-68.921,-15.848,-74.131)
C5': (-66.284,-16.144,-71.735)
O4': (-68.443,-16.123,-72.838)
C8: (-68.956,-13.475,-73.255)
O2': (-68.210,-17.628,-75.547)
C6: (-70.224,-11.448,-75.833)
C5: (-69.739,-12.393,-74.908)
C4: (-69.669,-13.712,-75.294)
P: (-64.346,-14.392,-71.382)
C4': (-67.105,-16.665,-72.899)
C2': (-67.876,-16.319,-75.130)
C2: (-70.459,-13.233,-77.274)
N1: (-70.579,-11.909,-77.045)
N3: (-70.019,-14.213,-76.476)
N6: (-70.340,-10.137,-75.613)
N7: (-69.282,-12.265,-73.618)
N9: (-69.170,-14.402,-74.231)
O5': (-65.775,-14.831,-71.968)
O3': (-65.639,-17.229,-74.759)
OP2: (-64.089,-12.983,-71.692)
C3': (-66.606,-16.317,-74.292)
C1': (-68.921,-15.848,-74.131)
C5': (-66.284,-16.144,-71.735)
O4': (-68.443,-16.123,-72.838)
C8: (-68.956,-13.475,-73.255)
O2': (-68.210,-17.628,-75.547)
C6: (-70.224,-11.448,-75.833)
C5: (-69.739,-12.393,-74.908)
C4: (-69.669,-13.712,-75.294)
P: (-64.346,-14.392,-71.382)
C4': (-67.105,-16.665,-72.899)
C2': (-67.876,-16.319,-75.130)
C2: (-70.459,-13.233,-77.274)
N1: (-70.579,-11.909,-77.045)
N3: (-70.019,-14.213,-76.476)
N6: (-70.340,-10.137,-75.613)
N7: (-69.282,-12.265,-73.618)
N9: (-69.170,-14.402,-74.231)
O5': (-65.775,-14.831,-71.968)
O3': (-65.639,-17.229,-74.759)
C4: (-71.803,-11.241,-80.247)
N3: (-71.228,-10.542,-79.211)
OP1: (-77.892,-4.859,-81.800)
OP2: (-77.823,-4.850,-79.250)
C2: (-71.246,-9.186,-79.068)
C1': (-72.000,-7.025,-79.987)
C3': (-72.165,-5.468,-81.823)
O5': (-75.763,-5.446,-80.567)
O4': (-73.336,-6.644,-80.186)
C5': (-74.722,-5.149,-81.503)
P: (-77.137,-4.632,-80.539)
C4': (-73.360,-5.385,-80.884)
C2': (-71.129,-6.277,-81.006)
O2': (-70.240,-5.424,-80.294)
N1: (-71.899,-8.481,-80.089)
O4: (-71.721,-12.466,-80.251)
O2: (-70.693,-8.698,-78.103)
C6: (-72.510,-9.123,-81.125)
C5: (-72.472,-10.452,-81.242)
O3': (-71.707,-4.177,-82.214)
N3: (-71.228,-10.542,-79.211)
OP1: (-77.892,-4.859,-81.800)
OP2: (-77.823,-4.850,-79.250)
C2: (-71.246,-9.186,-79.068)
C1': (-72.000,-7.025,-79.987)
C3': (-72.165,-5.468,-81.823)
O5': (-75.763,-5.446,-80.567)
O4': (-73.336,-6.644,-80.186)
C5': (-74.722,-5.149,-81.503)
P: (-77.137,-4.632,-80.539)
C4': (-73.360,-5.385,-80.884)
C2': (-71.129,-6.277,-81.006)
O2': (-70.240,-5.424,-80.294)
N1: (-71.899,-8.481,-80.089)
O4: (-71.721,-12.466,-80.251)
O2: (-70.693,-8.698,-78.103)
C6: (-72.510,-9.123,-81.125)
C5: (-72.472,-10.452,-81.242)
O3': (-71.707,-4.177,-82.214)
Image (generated by PyMOL):