ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HO6:B31:B36

Extra

PDB:
ATOM 1 O3' G A 30 38.000 27.106 17.476 1.00 20.00 O
ATOM 2 P A A 31 39.241 28.034 17.875 1.00 20.00 P
ATOM 3 OP1 A A 31 38.700 29.379 18.205 1.00 20.00 O
ATOM 4 OP2 A A 31 40.275 27.890 16.819 1.00 20.49 O
ATOM 5 O5' A A 31 39.816 27.384 19.211 1.00 20.00 O
ATOM 6 C5' A A 31 39.129 27.542 20.444 1.00 20.00 C
ATOM 7 C4' A A 31 40.035 27.188 21.592 1.00 20.00 C
ATOM 8 O4' A A 31 40.271 25.759 21.614 1.00 20.00 O
ATOM 9 C3' A A 31 41.421 27.804 21.550 1.00 20.00 C
ATOM 10 O3' A A 31 41.355 29.133 22.064 1.00 20.00 O
ATOM 11 C2' A A 31 42.196 26.851 22.455 1.00 20.00 C
ATOM 12 O2' A A 31 41.936 27.067 23.825 1.00 20.00 O
ATOM 13 C1' A A 31 41.584 25.506 22.063 1.00 20.00 C
ATOM 14 N9 A A 31 42.308 24.857 20.977 1.00 20.00 N
ATOM 15 C8 A A 31 41.984 24.798 19.644 1.00 20.00 C
ATOM 16 N7 A A 31 42.846 24.122 18.925 1.00 20.00 N
ATOM 17 C5 A A 31 43.801 23.713 19.846 1.00 20.00 C
ATOM 18 C6 A A 31 44.982 22.961 19.722 1.00 20.00 C
ATOM 19 N6 A A 31 45.432 22.464 18.575 1.00 20.00 N
ATOM 20 N1 A A 31 45.702 22.735 20.839 1.00 20.00 N
ATOM 21 C2 A A 31 45.261 23.235 21.997 1.00 20.00 C
ATOM 22 N3 A A 31 44.172 23.956 22.241 1.00 20.04 N
ATOM 23 C4 A A 31 43.480 24.161 21.111 1.00 20.00 C
ATOM 24 P G A 32 42.577 30.157 21.838 1.00 20.00 P
ATOM 25 OP1 G A 32 41.954 31.494 21.709 1.00 20.00 O
ATOM 26 OP2 G A 32 43.456 29.660 20.745 1.00 20.00 O
ATOM 27 O5' G A 32 43.370 30.082 23.234 1.00 20.00 O
TER

ATOM 1 O3' A B 35 55.697 20.419 18.413 1.00 21.27 O
ATOM 2 P U B 36 55.405 19.415 19.621 1.00 20.00 P
ATOM 3 OP1 U B 36 55.523 20.154 20.900 1.00 20.00 O
ATOM 4 OP2 U B 36 56.273 18.237 19.376 1.00 20.00 O
ATOM 5 O5' U B 36 53.873 19.031 19.360 1.00 20.12 O
ATOM 6 C5' U B 36 53.520 18.096 18.336 1.00 20.05 C
ATOM 7 C4' U B 36 52.398 18.615 17.445 1.00 20.52 C
ATOM 8 O4' U B 36 51.176 18.792 18.217 1.00 21.36 O
ATOM 9 C3' U B 36 52.723 19.993 16.866 1.00 21.44 C
ATOM 10 O3' U B 36 52.418 20.106 15.482 1.00 23.20 O
ATOM 11 C2' U B 36 51.979 21.003 17.737 1.00 21.52 C
ATOM 12 O2' U B 36 51.404 22.053 16.994 1.00 21.96 O
ATOM 13 C1' U B 36 50.820 20.153 18.239 1.00 21.09 C
ATOM 14 N1 U B 36 50.133 20.502 19.486 1.00 21.36 N
ATOM 15 C2 U B 36 48.893 21.102 19.352 1.00 21.95 C
ATOM 16 O2 U B 36 48.383 21.338 18.265 1.00 21.49 O
ATOM 17 N3 U B 36 48.268 21.406 20.531 1.00 20.41 N
ATOM 18 C4 U B 36 48.741 21.178 21.793 1.00 20.00 C
ATOM 19 O4 U B 36 48.048 21.490 22.752 1.00 21.61 O
ATOM 20 C5 U B 36 50.028 20.562 21.852 1.00 20.62 C
ATOM 21 C6 U B 36 50.667 20.253 20.721 1.00 21.80 C
ATOM 22 P C B 37 53.409 19.499 14.382 1.00 22.45 P
ATOM 23 OP1 C B 37 52.823 19.819 13.058 1.00 25.53 O
ATOM 24 OP2 C B 37 53.693 18.087 14.730 1.00 25.71 O
ATOM 25 O5' C B 37 54.735 20.352 14.555 1.00 23.83 O
TER

Atoms:
OP1: (38.700,29.379,18.205)
OP2: (40.275,27.890,16.819)
C3': (41.421,27.804,21.550)
C1': (41.584,25.506,22.063)
C5': (39.129,27.542,20.444)
O4': (40.271,25.759,21.614)
C8: (41.984,24.798,19.644)
O2': (41.936,27.067,23.825)
C6: (44.982,22.961,19.722)
C5: (43.801,23.713,19.846)
C4: (43.480,24.161,21.111)
P: (39.241,28.034,17.875)
C4': (40.035,27.188,21.592)
C2': (42.196,26.851,22.455)
C2: (45.261,23.235,21.997)
N1: (45.702,22.735,20.839)
N3: (44.172,23.956,22.241)
N6: (45.432,22.464,18.575)
N7: (42.846,24.122,18.925)
N9: (42.308,24.857,20.977)
O5': (39.816,27.384,19.211)
O3': (41.355,29.133,22.064)
C4: (48.741,21.178,21.793)
N3: (48.268,21.406,20.531)
OP1: (55.523,20.154,20.900)
OP2: (56.273,18.237,19.376)
C2: (48.893,21.102,19.352)
C1': (50.820,20.153,18.239)
C3': (52.723,19.993,16.866)
O5': (53.873,19.031,19.360)
O4': (51.176,18.792,18.217)
C5': (53.520,18.096,18.336)
P: (55.405,19.415,19.621)
C4': (52.398,18.615,17.445)
C2': (51.979,21.003,17.737)
O2': (51.404,22.053,16.994)
N1: (50.133,20.502,19.486)
O4: (48.048,21.490,22.752)
O2: (48.383,21.338,18.265)
C6: (50.667,20.253,20.721)
C5: (50.028,20.562,21.852)
O3': (52.418,20.106,15.482)
Image (generated by PyMOL):
PyMOL image
show in jmol