Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11503:11498
Extra
PDB:
ATOM 1 O3' A A1502 26.238 -10.159 149.653 1.00 65.02 O
ATOM 2 P A A1503 25.743 -8.699 149.168 1.00 79.08 P
ATOM 3 OP1 A A1503 25.827 -7.794 150.321 1.00 79.71 O
ATOM 4 OP2 A A1503 24.449 -8.872 148.512 1.00 78.59 O
ATOM 5 O5' A A1503 26.828 -8.300 148.091 1.00 78.86 O
ATOM 6 C5' A A1503 28.199 -8.188 148.437 1.00 79.22 C
ATOM 7 C4' A A1503 28.899 -7.179 147.566 1.00 79.13 C
ATOM 8 O4' A A1503 28.516 -7.419 146.196 1.00 78.47 O
ATOM 9 C3' A A1503 28.558 -5.712 147.863 1.00 79.43 C
ATOM 10 O3' A A1503 29.702 -4.865 147.627 1.00 79.64 O
ATOM 11 C2' A A1503 27.474 -5.423 146.823 1.00 78.89 C
ATOM 12 O2' A A1503 27.325 -4.064 146.474 1.00 78.94 O
ATOM 13 C1' A A1503 27.950 -6.257 145.643 1.00 78.34 C
ATOM 14 N9 A A1503 26.878 -6.668 144.734 1.00 77.75 N
ATOM 15 C8 A A1503 25.904 -7.590 145.005 1.00 77.57 C
ATOM 16 N7 A A1503 25.070 -7.784 144.011 1.00 77.01 N
ATOM 17 C5 A A1503 25.525 -6.944 143.009 1.00 76.80 C
ATOM 18 C6 A A1503 25.046 -6.689 141.719 1.00 76.25 C
ATOM 19 N6 A A1503 23.978 -7.290 141.207 1.00 75.79 N
ATOM 20 N1 A A1503 25.722 -5.798 140.958 1.00 76.18 N
ATOM 21 C2 A A1503 26.810 -5.186 141.470 1.00 76.65 C
ATOM 22 N3 A A1503 27.348 -5.335 142.688 1.00 77.20 N
ATOM 23 C4 A A1503 26.651 -6.248 143.427 1.00 77.25 C
ATOM 24 P G A1504 31.047 -4.985 148.512 1.00149.91 P
ATOM 25 OP1 G A1504 32.181 -4.684 147.607 1.00149.76 O
ATOM 26 OP2 G A1504 31.029 -6.284 149.207 1.00149.99 O
ATOM 27 O5' G A1504 30.885 -3.821 149.571 1.00150.51 O
TER
ATOM 1 O3' U B1497 21.205 -2.231 134.035 1.00 71.65 O
ATOM 2 P U B1498 19.913 -1.366 134.427 1.00121.81 P
ATOM 3 OP1 U B1498 19.062 -1.277 133.226 1.00121.23 O
ATOM 4 OP2 U B1498 20.394 -0.105 135.060 1.00122.33 O
ATOM 5 O5' U B1498 19.223 -2.292 135.513 1.00121.99 O
ATOM 6 C5' U B1498 18.783 -3.599 135.170 1.00121.58 C
ATOM 7 C4' U B1498 18.862 -4.558 136.336 1.00121.90 C
ATOM 8 O4' U B1498 20.244 -4.935 136.568 1.00122.12 O
ATOM 9 C3' U B1498 18.317 -4.035 137.669 1.00122.44 C
ATOM 10 O3' U B1498 17.671 -5.100 138.378 1.00122.46 O
ATOM 11 C2' U B1498 19.585 -3.633 138.417 1.00122.98 C
ATOM 12 O2' U B1498 19.450 -3.645 139.824 1.00123.52 O
ATOM 13 C1' U B1498 20.582 -4.693 137.920 1.00122.75 C
ATOM 14 N1 U B1498 22.023 -4.283 137.965 1.00123.03 N
ATOM 15 C2 U B1498 22.875 -4.987 138.814 1.00123.38 C
ATOM 16 O2 U B1498 22.470 -5.889 139.540 1.00123.47 O
ATOM 17 N3 U B1498 24.204 -4.584 138.794 1.00123.63 N
ATOM 18 C4 U B1498 24.780 -3.583 138.024 1.00123.56 C
ATOM 19 O4 U B1498 25.996 -3.336 138.128 1.00123.82 O
ATOM 20 C5 U B1498 23.841 -2.916 137.161 1.00123.19 C
ATOM 21 C6 U B1498 22.543 -3.284 137.154 1.00122.95 C
ATOM 22 P U B1499 16.597 -6.058 137.641 1.00161.82 P
ATOM 23 OP1 U B1499 15.961 -5.263 136.553 1.00161.43 O
ATOM 24 OP2 U B1499 15.725 -6.632 138.706 1.00162.03 O
ATOM 25 O5' U B1499 17.516 -7.211 137.010 1.00161.52 O
TER
ATOM 2 P A A1503 25.743 -8.699 149.168 1.00 79.08 P
ATOM 3 OP1 A A1503 25.827 -7.794 150.321 1.00 79.71 O
ATOM 4 OP2 A A1503 24.449 -8.872 148.512 1.00 78.59 O
ATOM 5 O5' A A1503 26.828 -8.300 148.091 1.00 78.86 O
ATOM 6 C5' A A1503 28.199 -8.188 148.437 1.00 79.22 C
ATOM 7 C4' A A1503 28.899 -7.179 147.566 1.00 79.13 C
ATOM 8 O4' A A1503 28.516 -7.419 146.196 1.00 78.47 O
ATOM 9 C3' A A1503 28.558 -5.712 147.863 1.00 79.43 C
ATOM 10 O3' A A1503 29.702 -4.865 147.627 1.00 79.64 O
ATOM 11 C2' A A1503 27.474 -5.423 146.823 1.00 78.89 C
ATOM 12 O2' A A1503 27.325 -4.064 146.474 1.00 78.94 O
ATOM 13 C1' A A1503 27.950 -6.257 145.643 1.00 78.34 C
ATOM 14 N9 A A1503 26.878 -6.668 144.734 1.00 77.75 N
ATOM 15 C8 A A1503 25.904 -7.590 145.005 1.00 77.57 C
ATOM 16 N7 A A1503 25.070 -7.784 144.011 1.00 77.01 N
ATOM 17 C5 A A1503 25.525 -6.944 143.009 1.00 76.80 C
ATOM 18 C6 A A1503 25.046 -6.689 141.719 1.00 76.25 C
ATOM 19 N6 A A1503 23.978 -7.290 141.207 1.00 75.79 N
ATOM 20 N1 A A1503 25.722 -5.798 140.958 1.00 76.18 N
ATOM 21 C2 A A1503 26.810 -5.186 141.470 1.00 76.65 C
ATOM 22 N3 A A1503 27.348 -5.335 142.688 1.00 77.20 N
ATOM 23 C4 A A1503 26.651 -6.248 143.427 1.00 77.25 C
ATOM 24 P G A1504 31.047 -4.985 148.512 1.00149.91 P
ATOM 25 OP1 G A1504 32.181 -4.684 147.607 1.00149.76 O
ATOM 26 OP2 G A1504 31.029 -6.284 149.207 1.00149.99 O
ATOM 27 O5' G A1504 30.885 -3.821 149.571 1.00150.51 O
TER
ATOM 1 O3' U B1497 21.205 -2.231 134.035 1.00 71.65 O
ATOM 2 P U B1498 19.913 -1.366 134.427 1.00121.81 P
ATOM 3 OP1 U B1498 19.062 -1.277 133.226 1.00121.23 O
ATOM 4 OP2 U B1498 20.394 -0.105 135.060 1.00122.33 O
ATOM 5 O5' U B1498 19.223 -2.292 135.513 1.00121.99 O
ATOM 6 C5' U B1498 18.783 -3.599 135.170 1.00121.58 C
ATOM 7 C4' U B1498 18.862 -4.558 136.336 1.00121.90 C
ATOM 8 O4' U B1498 20.244 -4.935 136.568 1.00122.12 O
ATOM 9 C3' U B1498 18.317 -4.035 137.669 1.00122.44 C
ATOM 10 O3' U B1498 17.671 -5.100 138.378 1.00122.46 O
ATOM 11 C2' U B1498 19.585 -3.633 138.417 1.00122.98 C
ATOM 12 O2' U B1498 19.450 -3.645 139.824 1.00123.52 O
ATOM 13 C1' U B1498 20.582 -4.693 137.920 1.00122.75 C
ATOM 14 N1 U B1498 22.023 -4.283 137.965 1.00123.03 N
ATOM 15 C2 U B1498 22.875 -4.987 138.814 1.00123.38 C
ATOM 16 O2 U B1498 22.470 -5.889 139.540 1.00123.47 O
ATOM 17 N3 U B1498 24.204 -4.584 138.794 1.00123.63 N
ATOM 18 C4 U B1498 24.780 -3.583 138.024 1.00123.56 C
ATOM 19 O4 U B1498 25.996 -3.336 138.128 1.00123.82 O
ATOM 20 C5 U B1498 23.841 -2.916 137.161 1.00123.19 C
ATOM 21 C6 U B1498 22.543 -3.284 137.154 1.00122.95 C
ATOM 22 P U B1499 16.597 -6.058 137.641 1.00161.82 P
ATOM 23 OP1 U B1499 15.961 -5.263 136.553 1.00161.43 O
ATOM 24 OP2 U B1499 15.725 -6.632 138.706 1.00162.03 O
ATOM 25 O5' U B1499 17.516 -7.211 137.010 1.00161.52 O
TER
Atoms:
OP1: (25.827,-7.794,150.321)
OP2: (24.449,-8.872,148.512)
C3': (28.558,-5.712,147.863)
C1': (27.950,-6.257,145.643)
C5': (28.199,-8.188,148.437)
O4': (28.516,-7.419,146.196)
C8: (25.904,-7.590,145.005)
O2': (27.325,-4.064,146.474)
C6: (25.046,-6.689,141.719)
C5: (25.525,-6.944,143.009)
C4: (26.651,-6.248,143.427)
P: (25.743,-8.699,149.168)
C4': (28.899,-7.179,147.566)
C2': (27.474,-5.423,146.823)
C2: (26.810,-5.186,141.470)
N1: (25.722,-5.798,140.958)
N3: (27.348,-5.335,142.688)
N6: (23.978,-7.290,141.207)
N7: (25.070,-7.784,144.011)
N9: (26.878,-6.668,144.734)
O5': (26.828,-8.300,148.091)
O3': (29.702,-4.865,147.627)
OP2: (24.449,-8.872,148.512)
C3': (28.558,-5.712,147.863)
C1': (27.950,-6.257,145.643)
C5': (28.199,-8.188,148.437)
O4': (28.516,-7.419,146.196)
C8: (25.904,-7.590,145.005)
O2': (27.325,-4.064,146.474)
C6: (25.046,-6.689,141.719)
C5: (25.525,-6.944,143.009)
C4: (26.651,-6.248,143.427)
P: (25.743,-8.699,149.168)
C4': (28.899,-7.179,147.566)
C2': (27.474,-5.423,146.823)
C2: (26.810,-5.186,141.470)
N1: (25.722,-5.798,140.958)
N3: (27.348,-5.335,142.688)
N6: (23.978,-7.290,141.207)
N7: (25.070,-7.784,144.011)
N9: (26.878,-6.668,144.734)
O5': (26.828,-8.300,148.091)
O3': (29.702,-4.865,147.627)
C4: (24.780,-3.583,138.024)
N3: (24.204,-4.584,138.794)
OP1: (19.062,-1.277,133.226)
OP2: (20.394,-0.105,135.060)
C2: (22.875,-4.987,138.814)
C1': (20.582,-4.693,137.920)
C3': (18.317,-4.035,137.669)
O5': (19.223,-2.292,135.513)
O4': (20.244,-4.935,136.568)
C5': (18.783,-3.599,135.170)
P: (19.913,-1.366,134.427)
C4': (18.862,-4.558,136.336)
C2': (19.585,-3.633,138.417)
O2': (19.450,-3.645,139.824)
N1: (22.023,-4.283,137.965)
O4: (25.996,-3.336,138.128)
O2: (22.470,-5.889,139.540)
C6: (22.543,-3.284,137.154)
C5: (23.841,-2.916,137.161)
O3': (17.671,-5.100,138.378)
N3: (24.204,-4.584,138.794)
OP1: (19.062,-1.277,133.226)
OP2: (20.394,-0.105,135.060)
C2: (22.875,-4.987,138.814)
C1': (20.582,-4.693,137.920)
C3': (18.317,-4.035,137.669)
O5': (19.223,-2.292,135.513)
O4': (20.244,-4.935,136.568)
C5': (18.783,-3.599,135.170)
P: (19.913,-1.366,134.427)
C4': (18.862,-4.558,136.336)
C2': (19.585,-3.633,138.417)
O2': (19.450,-3.645,139.824)
N1: (22.023,-4.283,137.965)
O4: (25.996,-3.336,138.128)
O2: (22.470,-5.889,139.540)
C6: (22.543,-3.284,137.154)
C5: (23.841,-2.916,137.161)
O3': (17.671,-5.100,138.378)
Image (generated by PyMOL):