Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02308:02055
Extra
PDB:
ATOM 1 O3' G A2307 74.273 88.218 72.438 1.00 34.66 O
ATOM 2 P A A2308 74.022 89.612 71.690 1.00 34.25 P
ATOM 3 OP1 A A2308 74.143 90.663 72.729 1.00 35.60 O
ATOM 4 OP2 A A2308 72.784 89.526 70.884 1.00 34.17 O
ATOM 5 O5' A A2308 75.307 89.755 70.757 1.00 35.73 O
ATOM 6 C5' A A2308 75.176 90.112 69.387 1.00 35.60 C
ATOM 7 C4' A A2308 75.934 91.389 69.088 1.00 34.87 C
ATOM 8 O4' A A2308 75.593 92.469 69.964 1.00 33.79 O
ATOM 9 C3' A A2308 77.458 91.411 69.095 1.00 33.79 C
ATOM 10 O3' A A2308 77.887 91.069 67.779 1.00 34.47 O
ATOM 11 C2' A A2308 77.797 92.880 69.441 1.00 34.64 C
ATOM 12 O2' A A2308 78.510 93.545 68.419 1.00 35.97 O
ATOM 13 C1' A A2308 76.416 93.530 69.579 1.00 32.75 C
ATOM 14 N9 A A2308 76.275 94.623 70.542 1.00 31.05 N
ATOM 15 C8 A A2308 77.244 95.248 71.288 1.00 30.13 C
ATOM 16 N7 A A2308 76.783 96.207 72.053 1.00 29.30 N
ATOM 17 C5 A A2308 75.420 96.215 71.797 1.00 29.13 C
ATOM 18 C6 A A2308 74.370 96.989 72.307 1.00 29.66 C
ATOM 19 N6 A A2308 74.536 97.948 73.218 1.00 30.36 N
ATOM 20 N1 A A2308 73.121 96.739 71.848 1.00 31.09 N
ATOM 21 C2 A A2308 72.953 95.771 70.942 1.00 30.03 C
ATOM 22 N3 A A2308 73.862 94.971 70.390 1.00 30.67 N
ATOM 23 C4 A A2308 75.091 95.246 70.867 1.00 30.81 C
ATOM 24 P A A2309 79.121 90.069 67.565 1.00 37.32 P
ATOM 25 OP1 A A2309 79.067 89.603 66.152 1.00 33.42 O
ATOM 26 OP2 A A2309 79.129 89.079 68.674 1.00 37.64 O
ATOM 27 O5' A A2309 80.406 90.986 67.751 1.00 37.06 O
TER
ATOM 1 O3' A B2054 65.724 104.844 77.269 1.00 26.48 O
ATOM 2 P U B2055 65.098 103.551 76.548 1.00 29.18 P
ATOM 3 OP1 U B2055 64.282 104.019 75.403 1.00 26.50 O
ATOM 4 OP2 U B2055 64.459 102.744 77.617 1.00 29.04 O
ATOM 5 O5' U B2055 66.360 102.724 76.013 1.00 27.89 O
ATOM 6 C5' U B2055 67.242 103.242 74.990 1.00 27.03 C
ATOM 7 C4' U B2055 68.642 102.691 75.180 1.00 29.04 C
ATOM 8 O4' U B2055 68.617 101.246 75.079 1.00 29.06 O
ATOM 9 C3' U B2055 69.665 103.050 74.115 1.00 30.54 C
ATOM 10 O3' U B2055 70.191 104.348 74.304 1.00 35.66 O
ATOM 11 C2' U B2055 70.748 101.997 74.330 1.00 29.09 C
ATOM 12 O2' U B2055 71.651 102.278 75.381 1.00 26.22 O
ATOM 13 C1' U B2055 69.908 100.780 74.714 1.00 27.08 C
ATOM 14 N1 U B2055 69.793 99.794 73.629 1.00 25.83 N
ATOM 15 C2 U B2055 70.931 99.068 73.308 1.00 27.38 C
ATOM 16 O2 U B2055 72.004 99.221 73.872 1.00 27.86 O
ATOM 17 N3 U B2055 70.771 98.160 72.298 1.00 26.88 N
ATOM 18 C4 U B2055 69.633 97.913 71.585 1.00 25.52 C
ATOM 19 O4 U B2055 69.680 97.117 70.658 1.00 28.20 O
ATOM 20 C5 U B2055 68.497 98.697 71.970 1.00 25.73 C
ATOM 21 C6 U B2055 68.613 99.587 72.953 1.00 25.16 C
ATOM 22 P G B2056 70.051 105.437 73.141 1.00 36.87 P
ATOM 23 OP1 G B2056 69.090 104.984 72.107 1.00 42.11 O
ATOM 24 OP2 G B2056 71.410 105.851 72.742 1.00 42.66 O
ATOM 25 O5' G B2056 69.350 106.636 73.888 1.00 38.19 O
TER
ATOM 2 P A A2308 74.022 89.612 71.690 1.00 34.25 P
ATOM 3 OP1 A A2308 74.143 90.663 72.729 1.00 35.60 O
ATOM 4 OP2 A A2308 72.784 89.526 70.884 1.00 34.17 O
ATOM 5 O5' A A2308 75.307 89.755 70.757 1.00 35.73 O
ATOM 6 C5' A A2308 75.176 90.112 69.387 1.00 35.60 C
ATOM 7 C4' A A2308 75.934 91.389 69.088 1.00 34.87 C
ATOM 8 O4' A A2308 75.593 92.469 69.964 1.00 33.79 O
ATOM 9 C3' A A2308 77.458 91.411 69.095 1.00 33.79 C
ATOM 10 O3' A A2308 77.887 91.069 67.779 1.00 34.47 O
ATOM 11 C2' A A2308 77.797 92.880 69.441 1.00 34.64 C
ATOM 12 O2' A A2308 78.510 93.545 68.419 1.00 35.97 O
ATOM 13 C1' A A2308 76.416 93.530 69.579 1.00 32.75 C
ATOM 14 N9 A A2308 76.275 94.623 70.542 1.00 31.05 N
ATOM 15 C8 A A2308 77.244 95.248 71.288 1.00 30.13 C
ATOM 16 N7 A A2308 76.783 96.207 72.053 1.00 29.30 N
ATOM 17 C5 A A2308 75.420 96.215 71.797 1.00 29.13 C
ATOM 18 C6 A A2308 74.370 96.989 72.307 1.00 29.66 C
ATOM 19 N6 A A2308 74.536 97.948 73.218 1.00 30.36 N
ATOM 20 N1 A A2308 73.121 96.739 71.848 1.00 31.09 N
ATOM 21 C2 A A2308 72.953 95.771 70.942 1.00 30.03 C
ATOM 22 N3 A A2308 73.862 94.971 70.390 1.00 30.67 N
ATOM 23 C4 A A2308 75.091 95.246 70.867 1.00 30.81 C
ATOM 24 P A A2309 79.121 90.069 67.565 1.00 37.32 P
ATOM 25 OP1 A A2309 79.067 89.603 66.152 1.00 33.42 O
ATOM 26 OP2 A A2309 79.129 89.079 68.674 1.00 37.64 O
ATOM 27 O5' A A2309 80.406 90.986 67.751 1.00 37.06 O
TER
ATOM 1 O3' A B2054 65.724 104.844 77.269 1.00 26.48 O
ATOM 2 P U B2055 65.098 103.551 76.548 1.00 29.18 P
ATOM 3 OP1 U B2055 64.282 104.019 75.403 1.00 26.50 O
ATOM 4 OP2 U B2055 64.459 102.744 77.617 1.00 29.04 O
ATOM 5 O5' U B2055 66.360 102.724 76.013 1.00 27.89 O
ATOM 6 C5' U B2055 67.242 103.242 74.990 1.00 27.03 C
ATOM 7 C4' U B2055 68.642 102.691 75.180 1.00 29.04 C
ATOM 8 O4' U B2055 68.617 101.246 75.079 1.00 29.06 O
ATOM 9 C3' U B2055 69.665 103.050 74.115 1.00 30.54 C
ATOM 10 O3' U B2055 70.191 104.348 74.304 1.00 35.66 O
ATOM 11 C2' U B2055 70.748 101.997 74.330 1.00 29.09 C
ATOM 12 O2' U B2055 71.651 102.278 75.381 1.00 26.22 O
ATOM 13 C1' U B2055 69.908 100.780 74.714 1.00 27.08 C
ATOM 14 N1 U B2055 69.793 99.794 73.629 1.00 25.83 N
ATOM 15 C2 U B2055 70.931 99.068 73.308 1.00 27.38 C
ATOM 16 O2 U B2055 72.004 99.221 73.872 1.00 27.86 O
ATOM 17 N3 U B2055 70.771 98.160 72.298 1.00 26.88 N
ATOM 18 C4 U B2055 69.633 97.913 71.585 1.00 25.52 C
ATOM 19 O4 U B2055 69.680 97.117 70.658 1.00 28.20 O
ATOM 20 C5 U B2055 68.497 98.697 71.970 1.00 25.73 C
ATOM 21 C6 U B2055 68.613 99.587 72.953 1.00 25.16 C
ATOM 22 P G B2056 70.051 105.437 73.141 1.00 36.87 P
ATOM 23 OP1 G B2056 69.090 104.984 72.107 1.00 42.11 O
ATOM 24 OP2 G B2056 71.410 105.851 72.742 1.00 42.66 O
ATOM 25 O5' G B2056 69.350 106.636 73.888 1.00 38.19 O
TER
Atoms:
OP1: (74.143,90.663,72.729)
OP2: (72.784,89.526,70.884)
C3': (77.458,91.411,69.095)
C1': (76.416,93.530,69.579)
C5': (75.176,90.112,69.387)
O4': (75.593,92.469,69.964)
C8: (77.244,95.248,71.288)
O2': (78.510,93.545,68.419)
C6: (74.370,96.989,72.307)
C5: (75.420,96.215,71.797)
C4: (75.091,95.246,70.867)
P: (74.022,89.612,71.690)
C4': (75.934,91.389,69.088)
C2': (77.797,92.880,69.441)
C2: (72.953,95.771,70.942)
N1: (73.121,96.739,71.848)
N3: (73.862,94.971,70.390)
N6: (74.536,97.948,73.218)
N7: (76.783,96.207,72.053)
N9: (76.275,94.623,70.542)
O5': (75.307,89.755,70.757)
O3': (77.887,91.069,67.779)
OP2: (72.784,89.526,70.884)
C3': (77.458,91.411,69.095)
C1': (76.416,93.530,69.579)
C5': (75.176,90.112,69.387)
O4': (75.593,92.469,69.964)
C8: (77.244,95.248,71.288)
O2': (78.510,93.545,68.419)
C6: (74.370,96.989,72.307)
C5: (75.420,96.215,71.797)
C4: (75.091,95.246,70.867)
P: (74.022,89.612,71.690)
C4': (75.934,91.389,69.088)
C2': (77.797,92.880,69.441)
C2: (72.953,95.771,70.942)
N1: (73.121,96.739,71.848)
N3: (73.862,94.971,70.390)
N6: (74.536,97.948,73.218)
N7: (76.783,96.207,72.053)
N9: (76.275,94.623,70.542)
O5': (75.307,89.755,70.757)
O3': (77.887,91.069,67.779)
C4: (69.633,97.913,71.585)
N3: (70.771,98.160,72.298)
OP1: (64.282,104.019,75.403)
OP2: (64.459,102.744,77.617)
C2: (70.931,99.068,73.308)
C1': (69.908,100.780,74.714)
C3': (69.665,103.050,74.115)
O5': (66.360,102.724,76.013)
O4': (68.617,101.246,75.079)
C5': (67.242,103.242,74.990)
P: (65.098,103.551,76.548)
C4': (68.642,102.691,75.180)
C2': (70.748,101.997,74.330)
O2': (71.651,102.278,75.381)
N1: (69.793,99.794,73.629)
O4: (69.680,97.117,70.658)
O2: (72.004,99.221,73.872)
C6: (68.613,99.587,72.953)
C5: (68.497,98.697,71.970)
O3': (70.191,104.348,74.304)
N3: (70.771,98.160,72.298)
OP1: (64.282,104.019,75.403)
OP2: (64.459,102.744,77.617)
C2: (70.931,99.068,73.308)
C1': (69.908,100.780,74.714)
C3': (69.665,103.050,74.115)
O5': (66.360,102.724,76.013)
O4': (68.617,101.246,75.079)
C5': (67.242,103.242,74.990)
P: (65.098,103.551,76.548)
C4': (68.642,102.691,75.180)
C2': (70.748,101.997,74.330)
O2': (71.651,102.278,75.381)
N1: (69.793,99.794,73.629)
O4: (69.680,97.117,70.658)
O2: (72.004,99.221,73.872)
C6: (68.613,99.587,72.953)
C5: (68.497,98.697,71.970)
O3': (70.191,104.348,74.304)
Image (generated by PyMOL):