ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HO7:B31:B36

Extra

PDB:
ATOM 1 O3' G A 30 37.696 26.901 17.837 1.00 24.23 O
ATOM 2 P A A 31 38.948 27.836 18.186 1.00 23.74 P
ATOM 3 OP1 A A 31 38.416 29.185 18.487 1.00 23.22 O
ATOM 4 OP2 A A 31 39.961 27.670 17.115 1.00 24.03 O
ATOM 5 O5' A A 31 39.531 27.210 19.528 1.00 23.46 O
ATOM 6 C5' A A 31 38.931 27.499 20.782 1.00 22.50 C
ATOM 7 C4' A A 31 39.848 27.079 21.893 1.00 21.71 C
ATOM 8 O4' A A 31 40.049 25.649 21.797 1.00 21.69 O
ATOM 9 C3' A A 31 41.257 27.638 21.832 1.00 21.97 C
ATOM 10 O3' A A 31 41.307 28.932 22.424 1.00 21.86 O
ATOM 11 C2' A A 31 42.014 26.619 22.671 1.00 21.63 C
ATOM 12 O2' A A 31 41.766 26.780 24.047 1.00 23.35 O
ATOM 13 C1' A A 31 41.349 25.317 22.236 1.00 21.26 C
ATOM 14 N9 A A 31 42.059 24.680 21.133 1.00 21.57 N
ATOM 15 C8 A A 31 41.751 24.685 19.796 1.00 21.01 C
ATOM 16 N7 A A 31 42.628 24.057 19.052 1.00 20.21 N
ATOM 17 C5 A A 31 43.569 23.600 19.963 1.00 20.00 C
ATOM 18 C6 A A 31 44.753 22.870 19.812 1.00 20.89 C
ATOM 19 N6 A A 31 45.226 22.459 18.634 1.00 20.93 N
ATOM 20 N1 A A 31 45.452 22.572 20.927 1.00 21.43 N
ATOM 21 C2 A A 31 44.984 22.988 22.106 1.00 20.00 C
ATOM 22 N3 A A 31 43.890 23.683 22.375 1.00 20.00 N
ATOM 23 C4 A A 31 43.221 23.963 21.248 1.00 20.03 C
ATOM 24 P G A 32 42.258 30.068 21.796 1.00 22.26 P
ATOM 25 OP1 G A 32 41.381 31.179 21.366 1.00 21.95 O
ATOM 26 OP2 G A 32 43.164 29.427 20.811 1.00 22.94 O
ATOM 27 O5' G A 32 43.133 30.584 23.031 1.00 22.50 O
TER

ATOM 1 O3' A B 35 55.752 20.486 18.392 1.00 25.42 O
ATOM 2 P U B 36 55.235 19.574 19.593 1.00 25.68 P
ATOM 3 OP1 U B 36 55.414 20.327 20.842 1.00 28.11 O
ATOM 4 OP2 U B 36 55.882 18.254 19.447 1.00 26.17 O
ATOM 5 O5' U B 36 53.676 19.423 19.270 1.00 28.53 O
ATOM 6 C5' U B 36 53.199 18.306 18.505 1.00 29.75 C
ATOM 7 C4' U B 36 52.079 18.704 17.552 1.00 30.55 C
ATOM 8 O4' U B 36 50.825 18.827 18.277 1.00 30.12 O
ATOM 9 C3' U B 36 52.321 20.062 16.899 1.00 31.85 C
ATOM 10 O3' U B 36 52.155 20.091 15.489 1.00 34.06 O
ATOM 11 C2' U B 36 51.473 21.065 17.679 1.00 31.63 C
ATOM 12 O2' U B 36 50.803 21.971 16.829 1.00 32.49 O
ATOM 13 C1' U B 36 50.387 20.166 18.264 1.00 30.52 C
ATOM 14 N1 U B 36 49.828 20.531 19.568 1.00 30.10 N
ATOM 15 C2 U B 36 48.563 21.082 19.564 1.00 30.15 C
ATOM 16 O2 U B 36 47.919 21.253 18.537 1.00 32.02 O
ATOM 17 N3 U B 36 48.073 21.418 20.797 1.00 26.95 N
ATOM 18 C4 U B 36 48.700 21.255 22.003 1.00 26.38 C
ATOM 19 O4 U B 36 48.118 21.588 23.030 1.00 26.56 O
ATOM 20 C5 U B 36 50.004 20.677 21.926 1.00 27.95 C
ATOM 21 C6 U B 36 50.513 20.344 20.737 1.00 29.65 C
ATOM 22 P C B 37 53.229 19.384 14.539 1.00 36.70 P
ATOM 23 OP1 C B 37 52.656 19.394 13.167 1.00 37.22 O
ATOM 24 OP2 C B 37 53.616 18.089 15.165 1.00 36.55 O
ATOM 25 O5' C B 37 54.482 20.366 14.568 1.00 35.07 O
TER

Atoms:
OP1: (38.416,29.185,18.487)
OP2: (39.961,27.670,17.115)
C3': (41.257,27.638,21.832)
C1': (41.349,25.317,22.236)
C5': (38.931,27.499,20.782)
O4': (40.049,25.649,21.797)
C8: (41.751,24.685,19.796)
O2': (41.766,26.780,24.047)
C6: (44.753,22.870,19.812)
C5: (43.569,23.600,19.963)
C4: (43.221,23.963,21.248)
P: (38.948,27.836,18.186)
C4': (39.848,27.079,21.893)
C2': (42.014,26.619,22.671)
C2: (44.984,22.988,22.106)
N1: (45.452,22.572,20.927)
N3: (43.890,23.683,22.375)
N6: (45.226,22.459,18.634)
N7: (42.628,24.057,19.052)
N9: (42.059,24.680,21.133)
O5': (39.531,27.210,19.528)
O3': (41.307,28.932,22.424)
C4: (48.700,21.255,22.003)
N3: (48.073,21.418,20.797)
OP1: (55.414,20.327,20.842)
OP2: (55.882,18.254,19.447)
C2: (48.563,21.082,19.564)
C1': (50.387,20.166,18.264)
C3': (52.321,20.062,16.899)
O5': (53.676,19.423,19.270)
O4': (50.825,18.827,18.277)
C5': (53.199,18.306,18.505)
P: (55.235,19.574,19.593)
C4': (52.079,18.704,17.552)
C2': (51.473,21.065,17.679)
O2': (50.803,21.971,16.829)
N1: (49.828,20.531,19.568)
O4: (48.118,21.588,23.030)
O2: (47.919,21.253,18.537)
C6: (50.513,20.344,20.737)
C5: (50.004,20.677,21.926)
O3': (52.155,20.091,15.489)
Image (generated by PyMOL):
PyMOL image
show in jmol