Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11134:11259
Extra
PDB:
ATOM 1 O3' C A1133 33.811 12.992 6.859 1.00 54.29 O
ATOM 2 P A A1134 32.212 13.034 7.105 1.00 56.23 P
ATOM 3 OP1 A A1134 31.590 11.919 6.301 1.00 56.46 O
ATOM 4 OP2 A A1134 31.763 14.479 6.850 1.00 56.55 O
ATOM 5 O5' A A1134 32.111 12.683 8.674 1.00 55.63 O
ATOM 6 C5' A A1134 32.595 13.595 9.651 1.00 55.35 C
ATOM 7 C4' A A1134 32.123 13.241 11.025 1.00 54.87 C
ATOM 8 O4' A A1134 32.298 11.816 11.221 1.00 54.62 O
ATOM 9 C3' A A1134 32.890 13.930 12.150 1.00 54.50 C
ATOM 10 O3' A A1134 32.192 15.059 12.702 1.00 54.53 O
ATOM 11 C2' A A1134 33.167 12.826 13.168 1.00 54.00 C
ATOM 12 O2' A A1134 32.117 12.768 14.103 1.00 53.78 O
ATOM 13 C1' A A1134 33.112 11.555 12.322 1.00 54.14 C
ATOM 14 N9 A A1134 34.438 11.124 11.808 1.00 54.15 N
ATOM 15 C8 A A1134 34.619 9.897 11.212 1.00 54.21 C
ATOM 16 N7 A A1134 35.805 9.667 10.742 1.00 54.25 N
ATOM 17 C5 A A1134 36.490 10.842 11.042 1.00 54.21 C
ATOM 18 C6 A A1134 37.832 11.237 10.824 1.00 54.23 C
ATOM 19 N6 A A1134 38.743 10.473 10.218 1.00 54.30 N
ATOM 20 N1 A A1134 38.230 12.452 11.238 1.00 54.20 N
ATOM 21 C2 A A1134 37.333 13.230 11.824 1.00 54.16 C
ATOM 22 N3 A A1134 36.056 12.969 12.081 1.00 54.13 N
ATOM 23 C4 A A1134 35.666 11.751 11.674 1.00 54.16 C
ATOM 24 P U A1135 31.993 16.418 11.850 1.00 57.59 P
ATOM 25 OP1 U A1135 30.972 16.142 10.819 1.00 58.00 O
ATOM 26 OP2 U A1135 33.349 16.878 11.405 1.00 57.68 O
ATOM 27 O5' U A1135 31.394 17.427 12.909 1.00 57.44 O
TER
ATOM 1 O3' C B1258 48.830 14.924 11.531 1.00 41.21 O
ATOM 2 P U B1259 48.141 15.683 10.313 1.00 45.80 P
ATOM 3 OP1 U B1259 49.181 15.757 9.255 1.00 46.14 O
ATOM 4 OP2 U B1259 47.541 16.916 10.820 1.00 45.81 O
ATOM 5 O5' U B1259 46.996 14.693 9.882 1.00 45.85 O
ATOM 6 C5' U B1259 47.309 13.366 9.550 1.00 45.79 C
ATOM 7 C4' U B1259 46.171 12.699 8.872 1.00 45.98 C
ATOM 8 O4' U B1259 45.041 12.688 9.772 1.00 45.71 O
ATOM 9 C3' U B1259 45.690 13.374 7.586 1.00 46.53 C
ATOM 10 O3' U B1259 45.362 12.379 6.632 1.00 46.77 O
ATOM 11 C2' U B1259 44.415 14.052 8.021 1.00 46.51 C
ATOM 12 O2' U B1259 43.480 14.240 6.990 1.00 46.94 O
ATOM 13 C1' U B1259 43.909 13.071 9.062 1.00 46.04 C
ATOM 14 N1 U B1259 42.961 13.648 9.977 1.00 45.84 N
ATOM 15 C2 U B1259 41.714 13.056 10.095 1.00 45.79 C
ATOM 16 O2 U B1259 41.369 12.022 9.556 1.00 45.88 O
ATOM 17 N3 U B1259 40.858 13.725 10.921 1.00 45.64 N
ATOM 18 C4 U B1259 41.132 14.909 11.597 1.00 45.55 C
ATOM 19 O4 U B1259 40.242 15.416 12.310 1.00 45.43 O
ATOM 20 C5 U B1259 42.450 15.445 11.386 1.00 45.62 C
ATOM 21 C6 U B1259 43.298 14.817 10.583 1.00 45.76 C
ATOM 22 P C B1260 45.487 12.680 5.064 1.00 47.33 P
ATOM 23 OP1 C B1260 46.044 14.042 4.912 1.00 47.53 O
ATOM 24 OP2 C B1260 44.176 12.366 4.448 1.00 47.58 O
ATOM 25 O5' C B1260 46.551 11.607 4.607 1.00 47.35 O
TER
ATOM 2 P A A1134 32.212 13.034 7.105 1.00 56.23 P
ATOM 3 OP1 A A1134 31.590 11.919 6.301 1.00 56.46 O
ATOM 4 OP2 A A1134 31.763 14.479 6.850 1.00 56.55 O
ATOM 5 O5' A A1134 32.111 12.683 8.674 1.00 55.63 O
ATOM 6 C5' A A1134 32.595 13.595 9.651 1.00 55.35 C
ATOM 7 C4' A A1134 32.123 13.241 11.025 1.00 54.87 C
ATOM 8 O4' A A1134 32.298 11.816 11.221 1.00 54.62 O
ATOM 9 C3' A A1134 32.890 13.930 12.150 1.00 54.50 C
ATOM 10 O3' A A1134 32.192 15.059 12.702 1.00 54.53 O
ATOM 11 C2' A A1134 33.167 12.826 13.168 1.00 54.00 C
ATOM 12 O2' A A1134 32.117 12.768 14.103 1.00 53.78 O
ATOM 13 C1' A A1134 33.112 11.555 12.322 1.00 54.14 C
ATOM 14 N9 A A1134 34.438 11.124 11.808 1.00 54.15 N
ATOM 15 C8 A A1134 34.619 9.897 11.212 1.00 54.21 C
ATOM 16 N7 A A1134 35.805 9.667 10.742 1.00 54.25 N
ATOM 17 C5 A A1134 36.490 10.842 11.042 1.00 54.21 C
ATOM 18 C6 A A1134 37.832 11.237 10.824 1.00 54.23 C
ATOM 19 N6 A A1134 38.743 10.473 10.218 1.00 54.30 N
ATOM 20 N1 A A1134 38.230 12.452 11.238 1.00 54.20 N
ATOM 21 C2 A A1134 37.333 13.230 11.824 1.00 54.16 C
ATOM 22 N3 A A1134 36.056 12.969 12.081 1.00 54.13 N
ATOM 23 C4 A A1134 35.666 11.751 11.674 1.00 54.16 C
ATOM 24 P U A1135 31.993 16.418 11.850 1.00 57.59 P
ATOM 25 OP1 U A1135 30.972 16.142 10.819 1.00 58.00 O
ATOM 26 OP2 U A1135 33.349 16.878 11.405 1.00 57.68 O
ATOM 27 O5' U A1135 31.394 17.427 12.909 1.00 57.44 O
TER
ATOM 1 O3' C B1258 48.830 14.924 11.531 1.00 41.21 O
ATOM 2 P U B1259 48.141 15.683 10.313 1.00 45.80 P
ATOM 3 OP1 U B1259 49.181 15.757 9.255 1.00 46.14 O
ATOM 4 OP2 U B1259 47.541 16.916 10.820 1.00 45.81 O
ATOM 5 O5' U B1259 46.996 14.693 9.882 1.00 45.85 O
ATOM 6 C5' U B1259 47.309 13.366 9.550 1.00 45.79 C
ATOM 7 C4' U B1259 46.171 12.699 8.872 1.00 45.98 C
ATOM 8 O4' U B1259 45.041 12.688 9.772 1.00 45.71 O
ATOM 9 C3' U B1259 45.690 13.374 7.586 1.00 46.53 C
ATOM 10 O3' U B1259 45.362 12.379 6.632 1.00 46.77 O
ATOM 11 C2' U B1259 44.415 14.052 8.021 1.00 46.51 C
ATOM 12 O2' U B1259 43.480 14.240 6.990 1.00 46.94 O
ATOM 13 C1' U B1259 43.909 13.071 9.062 1.00 46.04 C
ATOM 14 N1 U B1259 42.961 13.648 9.977 1.00 45.84 N
ATOM 15 C2 U B1259 41.714 13.056 10.095 1.00 45.79 C
ATOM 16 O2 U B1259 41.369 12.022 9.556 1.00 45.88 O
ATOM 17 N3 U B1259 40.858 13.725 10.921 1.00 45.64 N
ATOM 18 C4 U B1259 41.132 14.909 11.597 1.00 45.55 C
ATOM 19 O4 U B1259 40.242 15.416 12.310 1.00 45.43 O
ATOM 20 C5 U B1259 42.450 15.445 11.386 1.00 45.62 C
ATOM 21 C6 U B1259 43.298 14.817 10.583 1.00 45.76 C
ATOM 22 P C B1260 45.487 12.680 5.064 1.00 47.33 P
ATOM 23 OP1 C B1260 46.044 14.042 4.912 1.00 47.53 O
ATOM 24 OP2 C B1260 44.176 12.366 4.448 1.00 47.58 O
ATOM 25 O5' C B1260 46.551 11.607 4.607 1.00 47.35 O
TER
Atoms:
OP1: (31.590,11.919,6.301)
OP2: (31.763,14.479,6.850)
C3': (32.890,13.930,12.150)
C1': (33.112,11.555,12.322)
C5': (32.595,13.595,9.651)
O4': (32.298,11.816,11.221)
C8: (34.619,9.897,11.212)
O2': (32.117,12.768,14.103)
C6: (37.832,11.237,10.824)
C5: (36.490,10.842,11.042)
C4: (35.666,11.751,11.674)
P: (32.212,13.034,7.105)
C4': (32.123,13.241,11.025)
C2': (33.167,12.826,13.168)
C2: (37.333,13.230,11.824)
N1: (38.230,12.452,11.238)
N3: (36.056,12.969,12.081)
N6: (38.743,10.473,10.218)
N7: (35.805,9.667,10.742)
N9: (34.438,11.124,11.808)
O5': (32.111,12.683,8.674)
O3': (32.192,15.059,12.702)
OP2: (31.763,14.479,6.850)
C3': (32.890,13.930,12.150)
C1': (33.112,11.555,12.322)
C5': (32.595,13.595,9.651)
O4': (32.298,11.816,11.221)
C8: (34.619,9.897,11.212)
O2': (32.117,12.768,14.103)
C6: (37.832,11.237,10.824)
C5: (36.490,10.842,11.042)
C4: (35.666,11.751,11.674)
P: (32.212,13.034,7.105)
C4': (32.123,13.241,11.025)
C2': (33.167,12.826,13.168)
C2: (37.333,13.230,11.824)
N1: (38.230,12.452,11.238)
N3: (36.056,12.969,12.081)
N6: (38.743,10.473,10.218)
N7: (35.805,9.667,10.742)
N9: (34.438,11.124,11.808)
O5': (32.111,12.683,8.674)
O3': (32.192,15.059,12.702)
C4: (41.132,14.909,11.597)
N3: (40.858,13.725,10.921)
OP1: (49.181,15.757,9.255)
OP2: (47.541,16.916,10.820)
C2: (41.714,13.056,10.095)
C1': (43.909,13.071,9.062)
C3': (45.690,13.374,7.586)
O5': (46.996,14.693,9.882)
O4': (45.041,12.688,9.772)
C5': (47.309,13.366,9.550)
P: (48.141,15.683,10.313)
C4': (46.171,12.699,8.872)
C2': (44.415,14.052,8.021)
O2': (43.480,14.240,6.990)
N1: (42.961,13.648,9.977)
O4: (40.242,15.416,12.310)
O2: (41.369,12.022,9.556)
C6: (43.298,14.817,10.583)
C5: (42.450,15.445,11.386)
O3': (45.362,12.379,6.632)
N3: (40.858,13.725,10.921)
OP1: (49.181,15.757,9.255)
OP2: (47.541,16.916,10.820)
C2: (41.714,13.056,10.095)
C1': (43.909,13.071,9.062)
C3': (45.690,13.374,7.586)
O5': (46.996,14.693,9.882)
O4': (45.041,12.688,9.772)
C5': (47.309,13.366,9.550)
P: (48.141,15.683,10.313)
C4': (46.171,12.699,8.872)
C2': (44.415,14.052,8.021)
O2': (43.480,14.240,6.990)
N1: (42.961,13.648,9.977)
O4: (40.242,15.416,12.310)
O2: (41.369,12.022,9.556)
C6: (43.298,14.817,10.583)
C5: (42.450,15.445,11.386)
O3': (45.362,12.379,6.632)
Image (generated by PyMOL):