Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11397:11784
Extra
PDB:
ATOM 1 O3' A A1396 35.885 40.777 83.181 1.00 57.37 O
ATOM 2 P A A1397 35.572 39.870 84.440 1.00 52.11 P
ATOM 3 OP1 A A1397 36.357 40.395 85.612 1.00 52.41 O
ATOM 4 OP2 A A1397 35.758 38.454 84.012 1.00 51.61 O
ATOM 5 O5' A A1397 34.047 40.171 84.648 1.00 52.29 O
ATOM 6 C5' A A1397 33.096 39.719 83.706 1.00 52.07 C
ATOM 7 C4' A A1397 31.813 39.443 84.388 1.00 52.14 C
ATOM 8 O4' A A1397 31.836 38.089 84.910 1.00 51.78 O
ATOM 9 C3' A A1397 31.551 40.316 85.603 1.00 52.59 C
ATOM 10 O3' A A1397 31.002 41.575 85.245 1.00 52.97 O
ATOM 11 C2' A A1397 30.619 39.444 86.412 1.00 52.47 C
ATOM 12 O2' A A1397 29.349 39.434 85.806 1.00 52.46 O
ATOM 13 C1' A A1397 31.245 38.064 86.186 1.00 51.98 C
ATOM 14 N9 A A1397 32.296 37.733 87.179 1.00 51.97 N
ATOM 15 C8 A A1397 33.623 37.584 86.917 1.00 51.83 C
ATOM 16 N7 A A1397 34.345 37.301 87.955 1.00 51.87 N
ATOM 17 C5 A A1397 33.428 37.225 88.977 1.00 52.04 C
ATOM 18 C6 A A1397 33.561 36.945 90.356 1.00 52.17 C
ATOM 19 N6 A A1397 34.730 36.655 90.944 1.00 52.14 N
ATOM 20 N1 A A1397 32.446 36.975 91.113 1.00 52.35 N
ATOM 21 C2 A A1397 31.292 37.252 90.529 1.00 52.39 C
ATOM 22 N3 A A1397 31.058 37.521 89.258 1.00 52.28 N
ATOM 23 C4 A A1397 32.166 37.486 88.519 1.00 52.10 C
ATOM 24 P A A1398 31.164 42.879 86.192 1.00 56.32 P
ATOM 25 OP1 A A1398 30.125 43.849 85.760 1.00 56.65 O
ATOM 26 OP2 A A1398 32.618 43.302 86.158 1.00 56.38 O
ATOM 27 O5' A A1398 30.795 42.338 87.612 1.00 56.37 O
TER
ATOM 1 O3' A B1783 33.828 36.024 102.290 1.00 47.17 O
ATOM 2 P U B1784 32.673 35.980 101.172 1.00 55.42 P
ATOM 3 OP1 U B1784 32.000 37.290 101.182 1.00 55.84 O
ATOM 4 OP2 U B1784 31.879 34.770 101.437 1.00 55.16 O
ATOM 5 O5' U B1784 33.469 35.816 99.802 1.00 55.03 O
ATOM 6 C5' U B1784 34.796 35.347 99.756 1.00 54.85 C
ATOM 7 C4' U B1784 35.449 35.728 98.460 1.00 54.65 C
ATOM 8 O4' U B1784 34.528 35.469 97.384 1.00 54.37 O
ATOM 9 C3' U B1784 35.849 37.216 98.319 1.00 55.06 C
ATOM 10 O3' U B1784 37.096 37.328 97.656 1.00 54.92 O
ATOM 11 C2' U B1784 34.811 37.766 97.382 1.00 55.05 C
ATOM 12 O2' U B1784 35.273 38.843 96.618 1.00 55.21 O
ATOM 13 C1' U B1784 34.571 36.569 96.503 1.00 54.51 C
ATOM 14 N1 U B1784 33.327 36.645 95.712 1.00 54.41 N
ATOM 15 C2 U B1784 33.465 36.504 94.356 1.00 54.10 C
ATOM 16 O2 U B1784 34.528 36.264 93.819 1.00 53.89 O
ATOM 17 N3 U B1784 32.309 36.600 93.647 1.00 54.04 N
ATOM 18 C4 U B1784 31.042 36.857 94.128 1.00 54.27 C
ATOM 19 O4 U B1784 30.064 36.933 93.361 1.00 54.20 O
ATOM 20 C5 U B1784 31.009 37.025 95.541 1.00 54.59 C
ATOM 21 C6 U B1784 32.115 36.925 96.265 1.00 54.66 C
ATOM 22 P A B1785 38.445 37.441 98.486 1.00 51.15 P
ATOM 23 OP1 A B1785 38.120 38.100 99.778 1.00 51.65 O
ATOM 24 OP2 A B1785 39.477 38.043 97.591 1.00 51.13 O
ATOM 25 O5' A B1785 38.798 35.955 98.716 1.00 50.75 O
TER
ATOM 2 P A A1397 35.572 39.870 84.440 1.00 52.11 P
ATOM 3 OP1 A A1397 36.357 40.395 85.612 1.00 52.41 O
ATOM 4 OP2 A A1397 35.758 38.454 84.012 1.00 51.61 O
ATOM 5 O5' A A1397 34.047 40.171 84.648 1.00 52.29 O
ATOM 6 C5' A A1397 33.096 39.719 83.706 1.00 52.07 C
ATOM 7 C4' A A1397 31.813 39.443 84.388 1.00 52.14 C
ATOM 8 O4' A A1397 31.836 38.089 84.910 1.00 51.78 O
ATOM 9 C3' A A1397 31.551 40.316 85.603 1.00 52.59 C
ATOM 10 O3' A A1397 31.002 41.575 85.245 1.00 52.97 O
ATOM 11 C2' A A1397 30.619 39.444 86.412 1.00 52.47 C
ATOM 12 O2' A A1397 29.349 39.434 85.806 1.00 52.46 O
ATOM 13 C1' A A1397 31.245 38.064 86.186 1.00 51.98 C
ATOM 14 N9 A A1397 32.296 37.733 87.179 1.00 51.97 N
ATOM 15 C8 A A1397 33.623 37.584 86.917 1.00 51.83 C
ATOM 16 N7 A A1397 34.345 37.301 87.955 1.00 51.87 N
ATOM 17 C5 A A1397 33.428 37.225 88.977 1.00 52.04 C
ATOM 18 C6 A A1397 33.561 36.945 90.356 1.00 52.17 C
ATOM 19 N6 A A1397 34.730 36.655 90.944 1.00 52.14 N
ATOM 20 N1 A A1397 32.446 36.975 91.113 1.00 52.35 N
ATOM 21 C2 A A1397 31.292 37.252 90.529 1.00 52.39 C
ATOM 22 N3 A A1397 31.058 37.521 89.258 1.00 52.28 N
ATOM 23 C4 A A1397 32.166 37.486 88.519 1.00 52.10 C
ATOM 24 P A A1398 31.164 42.879 86.192 1.00 56.32 P
ATOM 25 OP1 A A1398 30.125 43.849 85.760 1.00 56.65 O
ATOM 26 OP2 A A1398 32.618 43.302 86.158 1.00 56.38 O
ATOM 27 O5' A A1398 30.795 42.338 87.612 1.00 56.37 O
TER
ATOM 1 O3' A B1783 33.828 36.024 102.290 1.00 47.17 O
ATOM 2 P U B1784 32.673 35.980 101.172 1.00 55.42 P
ATOM 3 OP1 U B1784 32.000 37.290 101.182 1.00 55.84 O
ATOM 4 OP2 U B1784 31.879 34.770 101.437 1.00 55.16 O
ATOM 5 O5' U B1784 33.469 35.816 99.802 1.00 55.03 O
ATOM 6 C5' U B1784 34.796 35.347 99.756 1.00 54.85 C
ATOM 7 C4' U B1784 35.449 35.728 98.460 1.00 54.65 C
ATOM 8 O4' U B1784 34.528 35.469 97.384 1.00 54.37 O
ATOM 9 C3' U B1784 35.849 37.216 98.319 1.00 55.06 C
ATOM 10 O3' U B1784 37.096 37.328 97.656 1.00 54.92 O
ATOM 11 C2' U B1784 34.811 37.766 97.382 1.00 55.05 C
ATOM 12 O2' U B1784 35.273 38.843 96.618 1.00 55.21 O
ATOM 13 C1' U B1784 34.571 36.569 96.503 1.00 54.51 C
ATOM 14 N1 U B1784 33.327 36.645 95.712 1.00 54.41 N
ATOM 15 C2 U B1784 33.465 36.504 94.356 1.00 54.10 C
ATOM 16 O2 U B1784 34.528 36.264 93.819 1.00 53.89 O
ATOM 17 N3 U B1784 32.309 36.600 93.647 1.00 54.04 N
ATOM 18 C4 U B1784 31.042 36.857 94.128 1.00 54.27 C
ATOM 19 O4 U B1784 30.064 36.933 93.361 1.00 54.20 O
ATOM 20 C5 U B1784 31.009 37.025 95.541 1.00 54.59 C
ATOM 21 C6 U B1784 32.115 36.925 96.265 1.00 54.66 C
ATOM 22 P A B1785 38.445 37.441 98.486 1.00 51.15 P
ATOM 23 OP1 A B1785 38.120 38.100 99.778 1.00 51.65 O
ATOM 24 OP2 A B1785 39.477 38.043 97.591 1.00 51.13 O
ATOM 25 O5' A B1785 38.798 35.955 98.716 1.00 50.75 O
TER
Atoms:
OP1: (36.357,40.395,85.612)
OP2: (35.758,38.454,84.012)
C3': (31.551,40.316,85.603)
C1': (31.245,38.064,86.186)
C5': (33.096,39.719,83.706)
O4': (31.836,38.089,84.910)
C8: (33.623,37.584,86.917)
O2': (29.349,39.434,85.806)
C6: (33.561,36.945,90.356)
C5: (33.428,37.225,88.977)
C4: (32.166,37.486,88.519)
P: (35.572,39.870,84.440)
C4': (31.813,39.443,84.388)
C2': (30.619,39.444,86.412)
C2: (31.292,37.252,90.529)
N1: (32.446,36.975,91.113)
N3: (31.058,37.521,89.258)
N6: (34.730,36.655,90.944)
N7: (34.345,37.301,87.955)
N9: (32.296,37.733,87.179)
O5': (34.047,40.171,84.648)
O3': (31.002,41.575,85.245)
OP2: (35.758,38.454,84.012)
C3': (31.551,40.316,85.603)
C1': (31.245,38.064,86.186)
C5': (33.096,39.719,83.706)
O4': (31.836,38.089,84.910)
C8: (33.623,37.584,86.917)
O2': (29.349,39.434,85.806)
C6: (33.561,36.945,90.356)
C5: (33.428,37.225,88.977)
C4: (32.166,37.486,88.519)
P: (35.572,39.870,84.440)
C4': (31.813,39.443,84.388)
C2': (30.619,39.444,86.412)
C2: (31.292,37.252,90.529)
N1: (32.446,36.975,91.113)
N3: (31.058,37.521,89.258)
N6: (34.730,36.655,90.944)
N7: (34.345,37.301,87.955)
N9: (32.296,37.733,87.179)
O5': (34.047,40.171,84.648)
O3': (31.002,41.575,85.245)
C4: (31.042,36.857,94.128)
N3: (32.309,36.600,93.647)
OP1: (32.000,37.290,101.182)
OP2: (31.879,34.770,101.437)
C2: (33.465,36.504,94.356)
C1': (34.571,36.569,96.503)
C3': (35.849,37.216,98.319)
O5': (33.469,35.816,99.802)
O4': (34.528,35.469,97.384)
C5': (34.796,35.347,99.756)
P: (32.673,35.980,101.172)
C4': (35.449,35.728,98.460)
C2': (34.811,37.766,97.382)
O2': (35.273,38.843,96.618)
N1: (33.327,36.645,95.712)
O4: (30.064,36.933,93.361)
O2: (34.528,36.264,93.819)
C6: (32.115,36.925,96.265)
C5: (31.009,37.025,95.541)
O3': (37.096,37.328,97.656)
N3: (32.309,36.600,93.647)
OP1: (32.000,37.290,101.182)
OP2: (31.879,34.770,101.437)
C2: (33.465,36.504,94.356)
C1': (34.571,36.569,96.503)
C3': (35.849,37.216,98.319)
O5': (33.469,35.816,99.802)
O4': (34.528,35.469,97.384)
C5': (34.796,35.347,99.756)
P: (32.673,35.980,101.172)
C4': (35.449,35.728,98.460)
C2': (34.811,37.766,97.382)
O2': (35.273,38.843,96.618)
N1: (33.327,36.645,95.712)
O4: (30.064,36.933,93.361)
O2: (34.528,36.264,93.819)
C6: (32.115,36.925,96.265)
C5: (31.009,37.025,95.541)
O3': (37.096,37.328,97.656)
Image (generated by PyMOL):