ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A1082:A1081

Extra

PDB:
ATOM 1 O3' U A1081 31.659 103.059 124.709 1.00 33.28 O
ATOM 2 P A A1082 32.161 103.800 123.389 1.00 32.83 P
ATOM 3 OP1 A A1082 32.013 105.261 123.553 1.00 33.31 O
ATOM 4 OP2 A A1082 31.462 103.114 122.282 1.00 33.77 O
ATOM 5 O5' A A1082 33.716 103.472 123.360 1.00 33.22 O
ATOM 6 C5' A A1082 34.181 102.117 123.437 1.00 36.00 C
ATOM 7 C4' A A1082 35.241 101.867 122.398 1.00 38.98 C
ATOM 8 O4' A A1082 36.281 102.860 122.535 1.00 37.89 O
ATOM 9 C3' A A1082 35.930 100.507 122.456 1.00 39.79 C
ATOM 10 O3' A A1082 36.276 100.156 121.117 1.00 40.27 O
ATOM 11 C2' A A1082 37.196 100.820 123.243 1.00 39.02 C
ATOM 12 O2' A A1082 38.248 99.936 122.944 1.00 40.83 O
ATOM 13 C1' A A1082 37.528 102.216 122.721 1.00 38.42 C
ATOM 14 N9 A A1082 38.343 103.050 123.617 1.00 37.01 N
ATOM 15 C8 A A1082 38.664 102.870 124.940 1.00 35.69 C
ATOM 16 N7 A A1082 39.394 103.832 125.437 1.00 34.27 N
ATOM 17 C5 A A1082 39.570 104.703 124.373 1.00 33.11 C
ATOM 18 C6 A A1082 40.244 105.926 124.254 1.00 33.98 C
ATOM 19 N6 A A1082 40.875 106.530 125.261 1.00 34.57 N
ATOM 20 N1 A A1082 40.241 106.531 123.046 1.00 34.07 N
ATOM 21 C2 A A1082 39.583 105.945 122.040 1.00 33.79 C
ATOM 22 N3 A A1082 38.901 104.809 122.037 1.00 33.95 N
ATOM 23 C4 A A1082 38.939 104.231 123.248 1.00 34.65 C
ATOM 24 P A A1083 35.166 99.522 120.147 1.00 42.32 P
ATOM 25 OP1 A A1083 35.567 99.883 118.765 1.00 43.98 O
ATOM 26 OP2 A A1083 33.814 99.909 120.635 1.00 42.67 O
ATOM 27 O5' A A1083 35.319 97.957 120.380 1.00 39.84 O
TER

ATOM 1 O3' G B1080 35.903 101.128 128.713 1.00 33.28 O
ATOM 2 P U B1081 35.789 101.781 127.262 1.00 34.54 P
ATOM 3 OP1 U B1081 35.797 100.622 126.345 1.00 35.06 O
ATOM 4 OP2 U B1081 36.789 102.838 127.106 1.00 34.78 O
ATOM 5 O5' U B1081 34.358 102.457 127.261 1.00 34.20 O
ATOM 6 C5' U B1081 33.189 101.663 127.134 1.00 32.98 C
ATOM 7 C4' U B1081 31.977 102.544 127.047 1.00 34.44 C
ATOM 8 O4' U B1081 31.867 103.341 128.249 1.00 34.19 O
ATOM 9 C3' U B1081 31.971 103.603 125.965 1.00 33.46 C
ATOM 10 O3' U B1081 31.659 103.059 124.709 1.00 33.28 O
ATOM 11 C2' U B1081 30.850 104.494 126.456 1.00 34.23 C
ATOM 12 O2' U B1081 29.609 103.828 126.272 1.00 36.25 O
ATOM 13 C1' U B1081 31.173 104.536 127.948 1.00 33.48 C
ATOM 14 N1 U B1081 32.029 105.679 128.291 1.00 32.79 N
ATOM 15 C2 U B1081 31.394 106.822 128.703 1.00 33.40 C
ATOM 16 O2 U B1081 30.182 106.904 128.796 1.00 34.72 O
ATOM 17 N3 U B1081 32.221 107.871 129.000 1.00 32.57 N
ATOM 18 C4 U B1081 33.588 107.899 128.921 1.00 32.80 C
ATOM 19 O4 U B1081 34.179 108.926 129.232 1.00 32.97 O
ATOM 20 C5 U B1081 34.186 106.678 128.486 1.00 33.19 C
ATOM 21 C6 U B1081 33.403 105.630 128.197 1.00 33.35 C
ATOM 22 P A B1082 32.161 103.800 123.389 1.00 32.83 P
ATOM 23 OP1 A B1082 32.013 105.261 123.553 1.00 33.31 O
ATOM 24 OP2 A B1082 31.462 103.114 122.282 1.00 33.77 O
ATOM 25 O5' A B1082 33.716 103.472 123.360 1.00 33.22 O
TER

Atoms:
OP1: (32.013,105.261,123.553)
OP2: (31.462,103.114,122.282)
C3': (35.930,100.507,122.456)
C1': (37.528,102.216,122.721)
C5': (34.181,102.117,123.437)
O4': (36.281,102.860,122.535)
C8: (38.664,102.870,124.940)
O2': (38.248,99.936,122.944)
C6: (40.244,105.926,124.254)
C5: (39.570,104.703,124.373)
C4: (38.939,104.231,123.248)
P: (32.161,103.800,123.389)
C4': (35.241,101.867,122.398)
C2': (37.196,100.820,123.243)
C2: (39.583,105.945,122.040)
N1: (40.241,106.531,123.046)
N3: (38.901,104.809,122.037)
N6: (40.875,106.530,125.261)
N7: (39.394,103.832,125.437)
N9: (38.343,103.050,123.617)
O5': (33.716,103.472,123.360)
O3': (36.276,100.156,121.117)
C4: (33.588,107.899,128.921)
N3: (32.221,107.871,129.000)
OP1: (35.797,100.622,126.345)
OP2: (36.789,102.838,127.106)
C2: (31.394,106.822,128.703)
C1': (31.173,104.536,127.948)
C3': (31.971,103.603,125.965)
O5': (34.358,102.457,127.261)
O4': (31.867,103.341,128.249)
C5': (33.189,101.663,127.134)
P: (35.789,101.781,127.262)
C4': (31.977,102.544,127.047)
C2': (30.850,104.494,126.456)
O2': (29.609,103.828,126.272)
N1: (32.029,105.679,128.291)
O4: (34.179,108.926,129.232)
O2: (30.182,106.904,128.796)
C6: (33.403,105.630,128.197)
C5: (34.186,106.678,128.486)
O3': (31.659,103.059,124.709)
Image (generated by PyMOL):
PyMOL image
show in jmol