ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1IL2:D13:D45

Extra

PDB:
ATOM 1 O3' A A 12 22.980 -45.062 16.180 1.00 59.87 O
ATOM 2 P A A 13 24.506 -44.843 16.517 1.00 65.41 P
ATOM 3 OP1 A A 13 24.742 -45.305 17.910 1.00 67.79 O
ATOM 4 OP2 A A 13 24.851 -43.455 16.143 1.00 67.10 O
ATOM 5 O5' A A 13 25.268 -45.804 15.493 1.00 67.01 O
ATOM 6 C5' A A 13 25.107 -47.233 15.562 1.00 64.58 C
ATOM 7 C4' A A 13 25.910 -47.905 14.475 1.00 65.13 C
ATOM 8 O4' A A 13 25.324 -47.621 13.180 1.00 62.89 O
ATOM 9 C3' A A 13 27.364 -47.488 14.351 1.00 66.14 C
ATOM 10 O3' A A 13 28.184 -48.221 15.248 1.00 67.50 O
ATOM 11 C2' A A 13 27.685 -47.826 12.901 1.00 64.99 C
ATOM 12 O2' A A 13 28.028 -49.183 12.732 1.00 66.74 O
ATOM 13 C1' A A 13 26.348 -47.542 12.208 1.00 63.77 C
ATOM 14 N9 A A 13 26.299 -46.214 11.599 1.00 62.97 N
ATOM 15 C8 A A 13 25.885 -45.039 12.169 1.00 57.73 C
ATOM 16 N7 A A 13 25.978 -44.005 11.369 1.00 59.53 N
ATOM 17 C5 A A 13 26.485 -44.537 10.189 1.00 63.21 C
ATOM 18 C6 A A 13 26.816 -43.960 8.946 1.00 65.93 C
ATOM 19 N6 A A 13 26.687 -42.661 8.676 1.00 67.12 N
ATOM 20 N1 A A 13 27.293 -44.777 7.984 1.00 64.07 N
ATOM 21 C2 A A 13 27.427 -46.075 8.256 1.00 60.54 C
ATOM 22 N3 A A 13 27.156 -46.735 9.380 1.00 59.34 N
ATOM 23 C4 A A 13 26.682 -45.898 10.318 1.00 61.21 C
TER

ATOM 1 O3' A B 44 24.966 -39.359 -1.074 1.00 44.56 O
ATOM 2 P U B 45 26.440 -39.885 -1.439 1.00 45.03 P
ATOM 3 OP1 U B 45 27.271 -38.748 -1.918 1.00 45.33 O
ATOM 4 OP2 U B 45 26.246 -41.064 -2.312 1.00 52.10 O
ATOM 5 O5' U B 45 27.031 -40.379 -0.043 1.00 41.97 O
ATOM 6 C5' U B 45 28.163 -39.722 0.550 1.00 42.34 C
ATOM 7 C4' U B 45 27.835 -39.295 1.953 1.00 46.11 C
ATOM 8 O4' U B 45 27.364 -40.444 2.695 1.00 45.73 O
ATOM 9 C3' U B 45 28.982 -38.687 2.750 1.00 48.49 C
ATOM 10 O3' U B 45 28.439 -37.641 3.552 1.00 54.31 O
ATOM 11 C2' U B 45 29.436 -39.840 3.644 1.00 49.65 C
ATOM 12 O2' U B 45 29.982 -39.409 4.873 1.00 49.44 O
ATOM 13 C1' U B 45 28.126 -40.587 3.879 1.00 49.00 C
ATOM 14 N1 U B 45 28.299 -42.021 4.150 1.00 52.01 N
ATOM 15 C2 U B 45 27.936 -42.486 5.402 1.00 54.89 C
ATOM 16 O2 U B 45 27.502 -41.766 6.280 1.00 52.08 O
ATOM 17 N3 U B 45 28.090 -43.838 5.587 1.00 58.83 N
ATOM 18 C4 U B 45 28.567 -44.753 4.672 1.00 57.45 C
ATOM 19 O4 U B 45 28.656 -45.938 4.996 1.00 57.37 O
ATOM 20 C5 U B 45 28.935 -44.189 3.405 1.00 58.73 C
ATOM 21 C6 U B 45 28.793 -42.874 3.198 1.00 57.74 C
TER

Atoms:
OP1: (24.742,-45.305,17.910)
OP2: (24.851,-43.455,16.143)
C3': (27.364,-47.488,14.351)
C1': (26.348,-47.542,12.208)
C5': (25.107,-47.233,15.562)
O4': (25.324,-47.621,13.180)
C8: (25.885,-45.039,12.169)
O2': (28.028,-49.183,12.732)
C6: (26.816,-43.960,8.946)
C5: (26.485,-44.537,10.189)
C4: (26.682,-45.898,10.318)
P: (24.506,-44.843,16.517)
C4': (25.910,-47.905,14.475)
C2': (27.685,-47.826,12.901)
C2: (27.427,-46.075,8.256)
N1: (27.293,-44.777,7.984)
N3: (27.156,-46.735,9.380)
N6: (26.687,-42.661,8.676)
N7: (25.978,-44.005,11.369)
N9: (26.299,-46.214,11.599)
O5': (25.268,-45.804,15.493)
O3': (28.184,-48.221,15.248)
C4: (28.567,-44.753,4.672)
N3: (28.090,-43.838,5.587)
OP1: (27.271,-38.748,-1.918)
OP2: (26.246,-41.064,-2.312)
C2: (27.936,-42.486,5.402)
C1': (28.126,-40.587,3.879)
C3': (28.982,-38.687,2.750)
O5': (27.031,-40.379,-0.043)
O4': (27.364,-40.444,2.695)
C5': (28.163,-39.722,0.550)
P: (26.440,-39.885,-1.439)
C4': (27.835,-39.295,1.953)
C2': (29.436,-39.840,3.644)
O2': (29.982,-39.409,4.873)
N1: (28.299,-42.021,4.150)
O4: (28.656,-45.938,4.996)
O2: (27.502,-41.766,6.280)
C6: (28.793,-42.874,3.198)
C5: (28.935,-44.189,3.405)
O3': (28.439,-37.641,3.552)
Image (generated by PyMOL):
PyMOL image
show in jmol