Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A844:A925
Extra
PDB:
ATOM 1 O3' A A 843 -117.928 -93.346 46.581 1.00 12.22 O
ATOM 2 P A A 844 -118.194 -94.897 46.237 1.00 46.59 P
ATOM 3 OP1 A A 844 -117.866 -95.676 47.461 1.00 46.59 O
ATOM 4 OP2 A A 844 -117.451 -95.191 44.979 1.00 46.59 O
ATOM 5 O5' A A 844 -119.762 -94.951 45.957 1.00 46.59 O
ATOM 6 C5' A A 844 -120.266 -95.108 44.632 1.00 46.59 C
ATOM 7 C4' A A 844 -121.029 -93.880 44.193 1.00 46.59 C
ATOM 8 O4' A A 844 -120.100 -92.819 43.860 1.00 46.59 O
ATOM 9 C3' A A 844 -121.904 -94.028 42.950 1.00 46.59 C
ATOM 10 O3' A A 844 -123.176 -94.613 43.235 1.00 46.59 O
ATOM 11 C2' A A 844 -121.996 -92.593 42.422 1.00 46.59 C
ATOM 12 O2' A A 844 -123.050 -91.879 43.069 1.00 46.59 O
ATOM 13 C1' A A 844 -120.646 -91.994 42.859 1.00 46.59 C
ATOM 14 N9 A A 844 -119.669 -91.903 41.762 1.00 44.87 N
ATOM 15 C8 A A 844 -119.101 -90.758 41.275 1.00 44.87 C
ATOM 16 N7 A A 844 -118.226 -90.973 40.327 1.00 44.87 N
ATOM 17 C5 A A 844 -118.196 -92.356 40.188 1.00 44.87 C
ATOM 18 C6 A A 844 -117.465 -93.216 39.343 1.00 44.87 C
ATOM 19 N6 A A 844 -116.583 -92.803 38.433 1.00 44.87 N
ATOM 20 N1 A A 844 -117.672 -94.536 39.463 1.00 44.87 N
ATOM 21 C2 A A 844 -118.557 -94.947 40.373 1.00 44.87 C
ATOM 22 N3 A A 844 -119.298 -94.241 41.225 1.00 44.87 N
ATOM 23 C4 A A 844 -119.074 -92.935 41.081 1.00 44.87 C
ATOM 24 P U A 845 -123.529 -96.098 42.710 1.00 88.16 P
ATOM 25 OP1 U A 845 -124.666 -96.589 43.525 1.00 88.16 O
ATOM 26 OP2 U A 845 -122.264 -96.878 42.712 1.00 88.16 O
ATOM 27 O5' U A 845 -124.006 -95.840 41.207 1.00 88.16 O
TER
ATOM 1 O3' U B 924 -110.094 -99.874 33.050 1.00 32.38 O
ATOM 2 P U B 925 -111.372 -99.363 33.904 1.00 14.74 P
ATOM 3 OP1 U B 925 -111.448-100.177 35.177 1.00 14.74 O
ATOM 4 OP2 U B 925 -112.560 -99.376 32.971 1.00 14.74 O
ATOM 5 O5' U B 925 -110.945 -97.870 34.233 1.00 14.74 O
ATOM 6 C5' U B 925 -110.259 -97.092 33.267 1.00 14.74 C
ATOM 7 C4' U B 925 -110.740 -95.679 33.306 1.00 14.74 C
ATOM 8 O4' U B 925 -112.181 -95.683 33.529 1.00 14.74 O
ATOM 9 C3' U B 925 -110.168 -94.864 34.436 1.00 14.74 C
ATOM 10 O3' U B 925 -110.187 -93.518 34.058 1.00 14.74 O
ATOM 11 C2' U B 925 -111.183 -95.083 35.538 1.00 14.74 C
ATOM 12 O2' U B 925 -111.170 -94.118 36.554 1.00 14.74 O
ATOM 13 C1' U B 925 -112.464 -95.026 34.750 1.00 14.74 C
ATOM 14 N1 U B 925 -113.574 -95.699 35.425 1.00 14.47 N
ATOM 15 C2 U B 925 -114.363 -94.872 36.236 1.00 14.47 C
ATOM 16 O2 U B 925 -114.175 -93.659 36.325 1.00 14.47 O
ATOM 17 N3 U B 925 -115.380 -95.536 36.905 1.00 14.47 N
ATOM 18 C4 U B 925 -115.633 -96.900 36.846 1.00 14.47 C
ATOM 19 O4 U B 925 -116.558 -97.365 37.504 1.00 14.47 O
ATOM 20 C5 U B 925 -114.760 -97.663 35.994 1.00 14.47 C
ATOM 21 C6 U B 925 -113.768 -97.051 35.337 1.00 14.47 C
ATOM 22 P A B 926 -108.822 -92.752 33.808 1.00 6.00 P
ATOM 23 OP1 A B 926 -107.761 -93.787 33.647 1.00 6.00 O
ATOM 24 OP2 A B 926 -108.686 -91.749 34.896 1.00 6.00 O
ATOM 25 O5' A B 926 -109.107 -92.014 32.420 1.00 6.00 O
TER
ATOM 2 P A A 844 -118.194 -94.897 46.237 1.00 46.59 P
ATOM 3 OP1 A A 844 -117.866 -95.676 47.461 1.00 46.59 O
ATOM 4 OP2 A A 844 -117.451 -95.191 44.979 1.00 46.59 O
ATOM 5 O5' A A 844 -119.762 -94.951 45.957 1.00 46.59 O
ATOM 6 C5' A A 844 -120.266 -95.108 44.632 1.00 46.59 C
ATOM 7 C4' A A 844 -121.029 -93.880 44.193 1.00 46.59 C
ATOM 8 O4' A A 844 -120.100 -92.819 43.860 1.00 46.59 O
ATOM 9 C3' A A 844 -121.904 -94.028 42.950 1.00 46.59 C
ATOM 10 O3' A A 844 -123.176 -94.613 43.235 1.00 46.59 O
ATOM 11 C2' A A 844 -121.996 -92.593 42.422 1.00 46.59 C
ATOM 12 O2' A A 844 -123.050 -91.879 43.069 1.00 46.59 O
ATOM 13 C1' A A 844 -120.646 -91.994 42.859 1.00 46.59 C
ATOM 14 N9 A A 844 -119.669 -91.903 41.762 1.00 44.87 N
ATOM 15 C8 A A 844 -119.101 -90.758 41.275 1.00 44.87 C
ATOM 16 N7 A A 844 -118.226 -90.973 40.327 1.00 44.87 N
ATOM 17 C5 A A 844 -118.196 -92.356 40.188 1.00 44.87 C
ATOM 18 C6 A A 844 -117.465 -93.216 39.343 1.00 44.87 C
ATOM 19 N6 A A 844 -116.583 -92.803 38.433 1.00 44.87 N
ATOM 20 N1 A A 844 -117.672 -94.536 39.463 1.00 44.87 N
ATOM 21 C2 A A 844 -118.557 -94.947 40.373 1.00 44.87 C
ATOM 22 N3 A A 844 -119.298 -94.241 41.225 1.00 44.87 N
ATOM 23 C4 A A 844 -119.074 -92.935 41.081 1.00 44.87 C
ATOM 24 P U A 845 -123.529 -96.098 42.710 1.00 88.16 P
ATOM 25 OP1 U A 845 -124.666 -96.589 43.525 1.00 88.16 O
ATOM 26 OP2 U A 845 -122.264 -96.878 42.712 1.00 88.16 O
ATOM 27 O5' U A 845 -124.006 -95.840 41.207 1.00 88.16 O
TER
ATOM 1 O3' U B 924 -110.094 -99.874 33.050 1.00 32.38 O
ATOM 2 P U B 925 -111.372 -99.363 33.904 1.00 14.74 P
ATOM 3 OP1 U B 925 -111.448-100.177 35.177 1.00 14.74 O
ATOM 4 OP2 U B 925 -112.560 -99.376 32.971 1.00 14.74 O
ATOM 5 O5' U B 925 -110.945 -97.870 34.233 1.00 14.74 O
ATOM 6 C5' U B 925 -110.259 -97.092 33.267 1.00 14.74 C
ATOM 7 C4' U B 925 -110.740 -95.679 33.306 1.00 14.74 C
ATOM 8 O4' U B 925 -112.181 -95.683 33.529 1.00 14.74 O
ATOM 9 C3' U B 925 -110.168 -94.864 34.436 1.00 14.74 C
ATOM 10 O3' U B 925 -110.187 -93.518 34.058 1.00 14.74 O
ATOM 11 C2' U B 925 -111.183 -95.083 35.538 1.00 14.74 C
ATOM 12 O2' U B 925 -111.170 -94.118 36.554 1.00 14.74 O
ATOM 13 C1' U B 925 -112.464 -95.026 34.750 1.00 14.74 C
ATOM 14 N1 U B 925 -113.574 -95.699 35.425 1.00 14.47 N
ATOM 15 C2 U B 925 -114.363 -94.872 36.236 1.00 14.47 C
ATOM 16 O2 U B 925 -114.175 -93.659 36.325 1.00 14.47 O
ATOM 17 N3 U B 925 -115.380 -95.536 36.905 1.00 14.47 N
ATOM 18 C4 U B 925 -115.633 -96.900 36.846 1.00 14.47 C
ATOM 19 O4 U B 925 -116.558 -97.365 37.504 1.00 14.47 O
ATOM 20 C5 U B 925 -114.760 -97.663 35.994 1.00 14.47 C
ATOM 21 C6 U B 925 -113.768 -97.051 35.337 1.00 14.47 C
ATOM 22 P A B 926 -108.822 -92.752 33.808 1.00 6.00 P
ATOM 23 OP1 A B 926 -107.761 -93.787 33.647 1.00 6.00 O
ATOM 24 OP2 A B 926 -108.686 -91.749 34.896 1.00 6.00 O
ATOM 25 O5' A B 926 -109.107 -92.014 32.420 1.00 6.00 O
TER
Atoms:
OP1: (-117.866,-95.676,47.461)
OP2: (-117.451,-95.191,44.979)
C3': (-121.904,-94.028,42.950)
C1': (-120.646,-91.994,42.859)
C5': (-120.266,-95.108,44.632)
O4': (-120.100,-92.819,43.860)
C8: (-119.101,-90.758,41.275)
O2': (-123.050,-91.879,43.069)
C6: (-117.465,-93.216,39.343)
C5: (-118.196,-92.356,40.188)
C4: (-119.074,-92.935,41.081)
P: (-118.194,-94.897,46.237)
C4': (-121.029,-93.880,44.193)
C2': (-121.996,-92.593,42.422)
C2: (-118.557,-94.947,40.373)
N1: (-117.672,-94.536,39.463)
N3: (-119.298,-94.241,41.225)
N6: (-116.583,-92.803,38.433)
N7: (-118.226,-90.973,40.327)
N9: (-119.669,-91.903,41.762)
O5': (-119.762,-94.951,45.957)
O3': (-123.176,-94.613,43.235)
OP2: (-117.451,-95.191,44.979)
C3': (-121.904,-94.028,42.950)
C1': (-120.646,-91.994,42.859)
C5': (-120.266,-95.108,44.632)
O4': (-120.100,-92.819,43.860)
C8: (-119.101,-90.758,41.275)
O2': (-123.050,-91.879,43.069)
C6: (-117.465,-93.216,39.343)
C5: (-118.196,-92.356,40.188)
C4: (-119.074,-92.935,41.081)
P: (-118.194,-94.897,46.237)
C4': (-121.029,-93.880,44.193)
C2': (-121.996,-92.593,42.422)
C2: (-118.557,-94.947,40.373)
N1: (-117.672,-94.536,39.463)
N3: (-119.298,-94.241,41.225)
N6: (-116.583,-92.803,38.433)
N7: (-118.226,-90.973,40.327)
N9: (-119.669,-91.903,41.762)
O5': (-119.762,-94.951,45.957)
O3': (-123.176,-94.613,43.235)
C4: (-115.633,-96.900,36.846)
N3: (-115.380,-95.536,36.905)
OP1: (-111.448,-100.177,35.177)
OP2: (-112.560,-99.376,32.971)
C2: (-114.363,-94.872,36.236)
C1': (-112.464,-95.026,34.750)
C3': (-110.168,-94.864,34.436)
O5': (-110.945,-97.870,34.233)
O4': (-112.181,-95.683,33.529)
C5': (-110.259,-97.092,33.267)
P: (-111.372,-99.363,33.904)
C4': (-110.740,-95.679,33.306)
C2': (-111.183,-95.083,35.538)
O2': (-111.170,-94.118,36.554)
N1: (-113.574,-95.699,35.425)
O4: (-116.558,-97.365,37.504)
O2: (-114.175,-93.659,36.325)
C6: (-113.768,-97.051,35.337)
C5: (-114.760,-97.663,35.994)
O3': (-110.187,-93.518,34.058)
N3: (-115.380,-95.536,36.905)
OP1: (-111.448,-100.177,35.177)
OP2: (-112.560,-99.376,32.971)
C2: (-114.363,-94.872,36.236)
C1': (-112.464,-95.026,34.750)
C3': (-110.168,-94.864,34.436)
O5': (-110.945,-97.870,34.233)
O4': (-112.181,-95.683,33.529)
C5': (-110.259,-97.092,33.267)
P: (-111.372,-99.363,33.904)
C4': (-110.740,-95.679,33.306)
C2': (-111.183,-95.083,35.538)
O2': (-111.170,-94.118,36.554)
N1: (-113.574,-95.699,35.425)
O4: (-116.558,-97.365,37.504)
O2: (-114.175,-93.659,36.325)
C6: (-113.768,-97.051,35.337)
C5: (-114.760,-97.663,35.994)
O3': (-110.187,-93.518,34.058)
Image (generated by PyMOL):