Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2566:A2565
Extra
PDB:
ATOM 1 O3' U A2565 68.287 173.902 113.032 1.00 49.06 O
ATOM 2 P A A2566 66.726 173.947 113.430 1.00 50.09 P
ATOM 3 OP1 A A2566 66.116 172.592 113.370 1.00 50.53 O
ATOM 4 OP2 A A2566 66.151 175.045 112.608 1.00 47.32 O
ATOM 5 O5' A A2566 66.717 174.401 114.960 1.00 48.49 O
ATOM 6 C5' A A2566 67.161 175.711 115.350 1.00 48.08 C
ATOM 7 C4' A A2566 66.018 176.504 115.957 1.00 48.81 C
ATOM 8 O4' A A2566 65.597 175.951 117.237 1.00 50.40 O
ATOM 9 C3' A A2566 66.378 177.929 116.310 1.00 48.21 C
ATOM 10 O3' A A2566 66.373 178.732 115.151 1.00 45.91 O
ATOM 11 C2' A A2566 65.283 178.304 117.287 1.00 49.85 C
ATOM 12 O2' A A2566 64.086 178.591 116.593 1.00 52.78 O
ATOM 13 C1' A A2566 65.154 177.004 118.088 1.00 50.66 C
ATOM 14 N9 A A2566 66.012 177.057 119.277 1.00 51.48 N
ATOM 15 C8 A A2566 67.305 176.627 119.416 1.00 51.82 C
ATOM 16 N7 A A2566 67.836 176.926 120.575 1.00 52.10 N
ATOM 17 C5 A A2566 66.819 177.577 121.253 1.00 52.22 C
ATOM 18 C6 A A2566 66.759 178.177 122.525 1.00 53.05 C
ATOM 19 N6 A A2566 67.802 178.268 123.355 1.00 54.33 N
ATOM 20 N1 A A2566 65.583 178.711 122.910 1.00 53.48 N
ATOM 21 C2 A A2566 64.555 178.669 122.056 1.00 52.97 C
ATOM 22 N3 A A2566 64.501 178.164 120.827 1.00 52.76 N
ATOM 23 C4 A A2566 65.680 177.628 120.482 1.00 51.80 C
ATOM 24 P C A2567 67.720 179.471 114.721 1.00 46.03 P
ATOM 25 OP1 C A2567 67.339 180.430 113.674 1.00 47.03 O
ATOM 26 OP2 C A2567 68.755 178.440 114.435 1.00 44.53 O
ATOM 27 O5' C A2567 68.088 180.277 116.044 1.00 46.44 O
TER
ATOM 1 O3' G B2564 68.910 171.579 117.681 1.00 43.05 O
ATOM 2 P U B2565 69.672 172.962 117.485 1.00 43.17 P
ATOM 3 OP1 U B2565 71.069 172.702 117.931 1.00 42.93 O
ATOM 4 OP2 U B2565 68.854 173.966 118.184 1.00 42.88 O
ATOM 5 O5' U B2565 69.639 173.233 115.919 1.00 42.42 O
ATOM 6 C5' U B2565 70.611 172.621 115.061 1.00 44.65 C
ATOM 7 C4' U B2565 70.400 173.037 113.625 1.00 47.00 C
ATOM 8 O4' U B2565 71.385 172.341 112.828 1.00 47.11 O
ATOM 9 C3' U B2565 69.030 172.678 113.056 1.00 47.81 C
ATOM 10 O3' U B2565 68.287 173.902 113.032 1.00 49.06 O
ATOM 11 C2' U B2565 69.332 172.270 111.614 1.00 48.43 C
ATOM 12 O2' U B2565 69.347 173.373 110.738 1.00 50.42 O
ATOM 13 C1' U B2565 70.766 171.740 111.717 1.00 47.99 C
ATOM 14 N1 U B2565 70.972 170.284 111.795 1.00 48.34 N
ATOM 15 C2 U B2565 71.762 169.715 110.805 1.00 49.41 C
ATOM 16 O2 U B2565 72.278 170.356 109.919 1.00 53.39 O
ATOM 17 N3 U B2565 71.935 168.370 110.894 1.00 47.92 N
ATOM 18 C4 U B2565 71.435 167.544 111.856 1.00 48.73 C
ATOM 19 O4 U B2565 71.765 166.361 111.840 1.00 51.13 O
ATOM 20 C5 U B2565 70.622 168.195 112.860 1.00 47.86 C
ATOM 21 C6 U B2565 70.420 169.512 112.790 1.00 46.05 C
ATOM 22 P A B2566 66.726 173.947 113.430 1.00 50.09 P
ATOM 23 OP1 A B2566 66.116 172.592 113.370 1.00 50.53 O
ATOM 24 OP2 A B2566 66.151 175.045 112.608 1.00 47.32 O
ATOM 25 O5' A B2566 66.717 174.401 114.960 1.00 48.49 O
TER
ATOM 2 P A A2566 66.726 173.947 113.430 1.00 50.09 P
ATOM 3 OP1 A A2566 66.116 172.592 113.370 1.00 50.53 O
ATOM 4 OP2 A A2566 66.151 175.045 112.608 1.00 47.32 O
ATOM 5 O5' A A2566 66.717 174.401 114.960 1.00 48.49 O
ATOM 6 C5' A A2566 67.161 175.711 115.350 1.00 48.08 C
ATOM 7 C4' A A2566 66.018 176.504 115.957 1.00 48.81 C
ATOM 8 O4' A A2566 65.597 175.951 117.237 1.00 50.40 O
ATOM 9 C3' A A2566 66.378 177.929 116.310 1.00 48.21 C
ATOM 10 O3' A A2566 66.373 178.732 115.151 1.00 45.91 O
ATOM 11 C2' A A2566 65.283 178.304 117.287 1.00 49.85 C
ATOM 12 O2' A A2566 64.086 178.591 116.593 1.00 52.78 O
ATOM 13 C1' A A2566 65.154 177.004 118.088 1.00 50.66 C
ATOM 14 N9 A A2566 66.012 177.057 119.277 1.00 51.48 N
ATOM 15 C8 A A2566 67.305 176.627 119.416 1.00 51.82 C
ATOM 16 N7 A A2566 67.836 176.926 120.575 1.00 52.10 N
ATOM 17 C5 A A2566 66.819 177.577 121.253 1.00 52.22 C
ATOM 18 C6 A A2566 66.759 178.177 122.525 1.00 53.05 C
ATOM 19 N6 A A2566 67.802 178.268 123.355 1.00 54.33 N
ATOM 20 N1 A A2566 65.583 178.711 122.910 1.00 53.48 N
ATOM 21 C2 A A2566 64.555 178.669 122.056 1.00 52.97 C
ATOM 22 N3 A A2566 64.501 178.164 120.827 1.00 52.76 N
ATOM 23 C4 A A2566 65.680 177.628 120.482 1.00 51.80 C
ATOM 24 P C A2567 67.720 179.471 114.721 1.00 46.03 P
ATOM 25 OP1 C A2567 67.339 180.430 113.674 1.00 47.03 O
ATOM 26 OP2 C A2567 68.755 178.440 114.435 1.00 44.53 O
ATOM 27 O5' C A2567 68.088 180.277 116.044 1.00 46.44 O
TER
ATOM 1 O3' G B2564 68.910 171.579 117.681 1.00 43.05 O
ATOM 2 P U B2565 69.672 172.962 117.485 1.00 43.17 P
ATOM 3 OP1 U B2565 71.069 172.702 117.931 1.00 42.93 O
ATOM 4 OP2 U B2565 68.854 173.966 118.184 1.00 42.88 O
ATOM 5 O5' U B2565 69.639 173.233 115.919 1.00 42.42 O
ATOM 6 C5' U B2565 70.611 172.621 115.061 1.00 44.65 C
ATOM 7 C4' U B2565 70.400 173.037 113.625 1.00 47.00 C
ATOM 8 O4' U B2565 71.385 172.341 112.828 1.00 47.11 O
ATOM 9 C3' U B2565 69.030 172.678 113.056 1.00 47.81 C
ATOM 10 O3' U B2565 68.287 173.902 113.032 1.00 49.06 O
ATOM 11 C2' U B2565 69.332 172.270 111.614 1.00 48.43 C
ATOM 12 O2' U B2565 69.347 173.373 110.738 1.00 50.42 O
ATOM 13 C1' U B2565 70.766 171.740 111.717 1.00 47.99 C
ATOM 14 N1 U B2565 70.972 170.284 111.795 1.00 48.34 N
ATOM 15 C2 U B2565 71.762 169.715 110.805 1.00 49.41 C
ATOM 16 O2 U B2565 72.278 170.356 109.919 1.00 53.39 O
ATOM 17 N3 U B2565 71.935 168.370 110.894 1.00 47.92 N
ATOM 18 C4 U B2565 71.435 167.544 111.856 1.00 48.73 C
ATOM 19 O4 U B2565 71.765 166.361 111.840 1.00 51.13 O
ATOM 20 C5 U B2565 70.622 168.195 112.860 1.00 47.86 C
ATOM 21 C6 U B2565 70.420 169.512 112.790 1.00 46.05 C
ATOM 22 P A B2566 66.726 173.947 113.430 1.00 50.09 P
ATOM 23 OP1 A B2566 66.116 172.592 113.370 1.00 50.53 O
ATOM 24 OP2 A B2566 66.151 175.045 112.608 1.00 47.32 O
ATOM 25 O5' A B2566 66.717 174.401 114.960 1.00 48.49 O
TER
Atoms:
OP1: (66.116,172.592,113.370)
OP2: (66.151,175.045,112.608)
C3': (66.378,177.929,116.310)
C1': (65.154,177.004,118.088)
C5': (67.161,175.711,115.350)
O4': (65.597,175.951,117.237)
C8: (67.305,176.627,119.416)
O2': (64.086,178.591,116.593)
C6: (66.759,178.177,122.525)
C5: (66.819,177.577,121.253)
C4: (65.680,177.628,120.482)
P: (66.726,173.947,113.430)
C4': (66.018,176.504,115.957)
C2': (65.283,178.304,117.287)
C2: (64.555,178.669,122.056)
N1: (65.583,178.711,122.910)
N3: (64.501,178.164,120.827)
N6: (67.802,178.268,123.355)
N7: (67.836,176.926,120.575)
N9: (66.012,177.057,119.277)
O5': (66.717,174.401,114.960)
O3': (66.373,178.732,115.151)
OP2: (66.151,175.045,112.608)
C3': (66.378,177.929,116.310)
C1': (65.154,177.004,118.088)
C5': (67.161,175.711,115.350)
O4': (65.597,175.951,117.237)
C8: (67.305,176.627,119.416)
O2': (64.086,178.591,116.593)
C6: (66.759,178.177,122.525)
C5: (66.819,177.577,121.253)
C4: (65.680,177.628,120.482)
P: (66.726,173.947,113.430)
C4': (66.018,176.504,115.957)
C2': (65.283,178.304,117.287)
C2: (64.555,178.669,122.056)
N1: (65.583,178.711,122.910)
N3: (64.501,178.164,120.827)
N6: (67.802,178.268,123.355)
N7: (67.836,176.926,120.575)
N9: (66.012,177.057,119.277)
O5': (66.717,174.401,114.960)
O3': (66.373,178.732,115.151)
C4: (71.435,167.544,111.856)
N3: (71.935,168.370,110.894)
OP1: (71.069,172.702,117.931)
OP2: (68.854,173.966,118.184)
C2: (71.762,169.715,110.805)
C1': (70.766,171.740,111.717)
C3': (69.030,172.678,113.056)
O5': (69.639,173.233,115.919)
O4': (71.385,172.341,112.828)
C5': (70.611,172.621,115.061)
P: (69.672,172.962,117.485)
C4': (70.400,173.037,113.625)
C2': (69.332,172.270,111.614)
O2': (69.347,173.373,110.738)
N1: (70.972,170.284,111.795)
O4: (71.765,166.361,111.840)
O2: (72.278,170.356,109.919)
C6: (70.420,169.512,112.790)
C5: (70.622,168.195,112.860)
O3': (68.287,173.902,113.032)
N3: (71.935,168.370,110.894)
OP1: (71.069,172.702,117.931)
OP2: (68.854,173.966,118.184)
C2: (71.762,169.715,110.805)
C1': (70.766,171.740,111.717)
C3': (69.030,172.678,113.056)
O5': (69.639,173.233,115.919)
O4': (71.385,172.341,112.828)
C5': (70.611,172.621,115.061)
P: (69.672,172.962,117.485)
C4': (70.400,173.037,113.625)
C2': (69.332,172.270,111.614)
O2': (69.347,173.373,110.738)
N1: (70.972,170.284,111.795)
O4: (71.765,166.361,111.840)
O2: (72.278,170.356,109.919)
C6: (70.420,169.512,112.790)
C5: (70.622,168.195,112.860)
O3': (68.287,173.902,113.032)
Image (generated by PyMOL):