Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2260:A2265
Extra
PDB:
ATOM 1 O3' A A2259 -122.365 -66.811 14.565 1.00 0.01 O
ATOM 2 P A A2260 -123.693 -67.529 14.143 1.00 0.01 P
ATOM 3 OP1 A A2260 -124.396 -66.637 13.227 1.00 0.01 O
ATOM 4 OP2 A A2260 -124.347 -67.951 15.361 1.00 0.01 O
ATOM 5 O5' A A2260 -123.187 -68.767 13.349 1.00 0.01 O
ATOM 6 C5' A A2260 -123.732 -69.071 12.081 1.00 0.01 C
ATOM 7 C4' A A2260 -123.042 -70.251 11.488 1.00 0.01 C
ATOM 8 O4' A A2260 -121.719 -69.866 11.097 1.00 0.01 O
ATOM 9 C3' A A2260 -122.852 -71.422 12.433 1.00 0.01 C
ATOM 10 O3' A A2260 -123.957 -72.317 12.396 1.00 0.01 O
ATOM 11 C2' A A2260 -121.543 -72.055 11.976 1.00 0.01 C
ATOM 12 O2' A A2260 -121.779 -73.123 11.093 1.00 0.01 O
ATOM 13 C1' A A2260 -120.853 -70.941 11.199 1.00 0.01 C
ATOM 14 N9 A A2260 -119.627 -70.481 11.836 1.00 0.01 N
ATOM 15 C8 A A2260 -118.481 -70.237 11.182 1.00 0.01 C
ATOM 16 N7 A A2260 -117.530 -69.838 11.974 1.00 0.01 N
ATOM 17 C5 A A2260 -118.094 -69.814 13.211 1.00 0.01 C
ATOM 18 C6 A A2260 -117.572 -69.452 14.430 1.00 0.01 C
ATOM 19 N6 A A2260 -116.335 -69.054 14.599 1.00 0.01 N
ATOM 20 N1 A A2260 -118.364 -69.510 15.480 1.00 0.01 N
ATOM 21 C2 A A2260 -119.596 -69.933 15.250 1.00 0.01 C
ATOM 22 N3 A A2260 -120.210 -70.301 14.131 1.00 0.01 N
ATOM 23 C4 A A2260 -119.384 -70.199 13.132 1.00 0.01 C
ATOM 24 P A A2261 -124.876 -72.550 13.679 1.00 0.01 P
ATOM 25 OP1 A A2261 -124.119 -72.095 14.821 1.00 0.01 O
ATOM 26 OP2 A A2261 -125.333 -73.943 13.633 1.00 0.01 O
ATOM 27 O5' A A2261 -126.093 -71.586 13.456 1.00 0.01 O
TER
ATOM 1 O3' G B2264 -116.449 -64.597 24.021 1.00 0.01 O
ATOM 2 P U B2265 -116.186 -63.535 22.879 1.00 0.01 P
ATOM 3 OP1 U B2265 -115.324 -62.468 23.452 1.00 0.01 O
ATOM 4 OP2 U B2265 -117.508 -63.163 22.307 1.00 0.01 O
ATOM 5 O5' U B2265 -115.379 -64.381 21.840 1.00 0.01 O
ATOM 6 C5' U B2265 -114.001 -64.579 21.995 1.00 0.01 C
ATOM 7 C4' U B2265 -113.474 -65.367 20.857 1.00 0.01 C
ATOM 8 O4' U B2265 -114.317 -66.509 20.673 1.00 0.01 O
ATOM 9 C3' U B2265 -113.504 -64.657 19.531 1.00 0.01 C
ATOM 10 O3' U B2265 -112.344 -63.880 19.328 1.00 0.01 O
ATOM 11 C2' U B2265 -113.659 -65.784 18.531 1.00 0.01 C
ATOM 12 O2' U B2265 -112.401 -66.343 18.218 1.00 0.01 O
ATOM 13 C1' U B2265 -114.454 -66.805 19.324 1.00 0.01 C
ATOM 14 N1 U B2265 -115.890 -66.814 19.006 1.00 0.01 N
ATOM 15 C2 U B2265 -116.277 -67.663 18.012 1.00 0.01 C
ATOM 16 O2 U B2265 -115.448 -68.294 17.381 1.00 0.01 O
ATOM 17 N3 U B2265 -117.609 -67.735 17.741 1.00 0.01 N
ATOM 18 C4 U B2265 -118.592 -67.082 18.405 1.00 0.01 C
ATOM 19 O4 U B2265 -119.753 -67.242 18.033 1.00 0.01 O
ATOM 20 C5 U B2265 -118.127 -66.235 19.464 1.00 0.01 C
ATOM 21 C6 U B2265 -116.823 -66.141 19.734 1.00 0.01 C
ATOM 22 P A B2266 -112.313 -62.355 19.766 1.00 0.01 P
ATOM 23 OP1 A B2266 -112.188 -62.327 21.220 1.00 0.01 O
ATOM 24 OP2 A B2266 -113.471 -61.727 19.136 1.00 0.01 O
ATOM 25 O5' A B2266 -110.988 -61.828 19.078 1.00 0.01 O
TER
ATOM 2 P A A2260 -123.693 -67.529 14.143 1.00 0.01 P
ATOM 3 OP1 A A2260 -124.396 -66.637 13.227 1.00 0.01 O
ATOM 4 OP2 A A2260 -124.347 -67.951 15.361 1.00 0.01 O
ATOM 5 O5' A A2260 -123.187 -68.767 13.349 1.00 0.01 O
ATOM 6 C5' A A2260 -123.732 -69.071 12.081 1.00 0.01 C
ATOM 7 C4' A A2260 -123.042 -70.251 11.488 1.00 0.01 C
ATOM 8 O4' A A2260 -121.719 -69.866 11.097 1.00 0.01 O
ATOM 9 C3' A A2260 -122.852 -71.422 12.433 1.00 0.01 C
ATOM 10 O3' A A2260 -123.957 -72.317 12.396 1.00 0.01 O
ATOM 11 C2' A A2260 -121.543 -72.055 11.976 1.00 0.01 C
ATOM 12 O2' A A2260 -121.779 -73.123 11.093 1.00 0.01 O
ATOM 13 C1' A A2260 -120.853 -70.941 11.199 1.00 0.01 C
ATOM 14 N9 A A2260 -119.627 -70.481 11.836 1.00 0.01 N
ATOM 15 C8 A A2260 -118.481 -70.237 11.182 1.00 0.01 C
ATOM 16 N7 A A2260 -117.530 -69.838 11.974 1.00 0.01 N
ATOM 17 C5 A A2260 -118.094 -69.814 13.211 1.00 0.01 C
ATOM 18 C6 A A2260 -117.572 -69.452 14.430 1.00 0.01 C
ATOM 19 N6 A A2260 -116.335 -69.054 14.599 1.00 0.01 N
ATOM 20 N1 A A2260 -118.364 -69.510 15.480 1.00 0.01 N
ATOM 21 C2 A A2260 -119.596 -69.933 15.250 1.00 0.01 C
ATOM 22 N3 A A2260 -120.210 -70.301 14.131 1.00 0.01 N
ATOM 23 C4 A A2260 -119.384 -70.199 13.132 1.00 0.01 C
ATOM 24 P A A2261 -124.876 -72.550 13.679 1.00 0.01 P
ATOM 25 OP1 A A2261 -124.119 -72.095 14.821 1.00 0.01 O
ATOM 26 OP2 A A2261 -125.333 -73.943 13.633 1.00 0.01 O
ATOM 27 O5' A A2261 -126.093 -71.586 13.456 1.00 0.01 O
TER
ATOM 1 O3' G B2264 -116.449 -64.597 24.021 1.00 0.01 O
ATOM 2 P U B2265 -116.186 -63.535 22.879 1.00 0.01 P
ATOM 3 OP1 U B2265 -115.324 -62.468 23.452 1.00 0.01 O
ATOM 4 OP2 U B2265 -117.508 -63.163 22.307 1.00 0.01 O
ATOM 5 O5' U B2265 -115.379 -64.381 21.840 1.00 0.01 O
ATOM 6 C5' U B2265 -114.001 -64.579 21.995 1.00 0.01 C
ATOM 7 C4' U B2265 -113.474 -65.367 20.857 1.00 0.01 C
ATOM 8 O4' U B2265 -114.317 -66.509 20.673 1.00 0.01 O
ATOM 9 C3' U B2265 -113.504 -64.657 19.531 1.00 0.01 C
ATOM 10 O3' U B2265 -112.344 -63.880 19.328 1.00 0.01 O
ATOM 11 C2' U B2265 -113.659 -65.784 18.531 1.00 0.01 C
ATOM 12 O2' U B2265 -112.401 -66.343 18.218 1.00 0.01 O
ATOM 13 C1' U B2265 -114.454 -66.805 19.324 1.00 0.01 C
ATOM 14 N1 U B2265 -115.890 -66.814 19.006 1.00 0.01 N
ATOM 15 C2 U B2265 -116.277 -67.663 18.012 1.00 0.01 C
ATOM 16 O2 U B2265 -115.448 -68.294 17.381 1.00 0.01 O
ATOM 17 N3 U B2265 -117.609 -67.735 17.741 1.00 0.01 N
ATOM 18 C4 U B2265 -118.592 -67.082 18.405 1.00 0.01 C
ATOM 19 O4 U B2265 -119.753 -67.242 18.033 1.00 0.01 O
ATOM 20 C5 U B2265 -118.127 -66.235 19.464 1.00 0.01 C
ATOM 21 C6 U B2265 -116.823 -66.141 19.734 1.00 0.01 C
ATOM 22 P A B2266 -112.313 -62.355 19.766 1.00 0.01 P
ATOM 23 OP1 A B2266 -112.188 -62.327 21.220 1.00 0.01 O
ATOM 24 OP2 A B2266 -113.471 -61.727 19.136 1.00 0.01 O
ATOM 25 O5' A B2266 -110.988 -61.828 19.078 1.00 0.01 O
TER
Atoms:
OP1: (-124.396,-66.637,13.227)
OP2: (-124.347,-67.951,15.361)
C3': (-122.852,-71.422,12.433)
C1': (-120.853,-70.941,11.199)
C5': (-123.732,-69.071,12.081)
O4': (-121.719,-69.866,11.097)
C8: (-118.481,-70.237,11.182)
O2': (-121.779,-73.123,11.093)
C6: (-117.572,-69.452,14.430)
C5: (-118.094,-69.814,13.211)
C4: (-119.384,-70.199,13.132)
P: (-123.693,-67.529,14.143)
C4': (-123.042,-70.251,11.488)
C2': (-121.543,-72.055,11.976)
C2: (-119.596,-69.933,15.250)
N1: (-118.364,-69.510,15.480)
N3: (-120.210,-70.301,14.131)
N6: (-116.335,-69.054,14.599)
N7: (-117.530,-69.838,11.974)
N9: (-119.627,-70.481,11.836)
O5': (-123.187,-68.767,13.349)
O3': (-123.957,-72.317,12.396)
OP2: (-124.347,-67.951,15.361)
C3': (-122.852,-71.422,12.433)
C1': (-120.853,-70.941,11.199)
C5': (-123.732,-69.071,12.081)
O4': (-121.719,-69.866,11.097)
C8: (-118.481,-70.237,11.182)
O2': (-121.779,-73.123,11.093)
C6: (-117.572,-69.452,14.430)
C5: (-118.094,-69.814,13.211)
C4: (-119.384,-70.199,13.132)
P: (-123.693,-67.529,14.143)
C4': (-123.042,-70.251,11.488)
C2': (-121.543,-72.055,11.976)
C2: (-119.596,-69.933,15.250)
N1: (-118.364,-69.510,15.480)
N3: (-120.210,-70.301,14.131)
N6: (-116.335,-69.054,14.599)
N7: (-117.530,-69.838,11.974)
N9: (-119.627,-70.481,11.836)
O5': (-123.187,-68.767,13.349)
O3': (-123.957,-72.317,12.396)
C4: (-118.592,-67.082,18.405)
N3: (-117.609,-67.735,17.741)
OP1: (-115.324,-62.468,23.452)
OP2: (-117.508,-63.163,22.307)
C2: (-116.277,-67.663,18.012)
C1': (-114.454,-66.805,19.324)
C3': (-113.504,-64.657,19.531)
O5': (-115.379,-64.381,21.840)
O4': (-114.317,-66.509,20.673)
C5': (-114.001,-64.579,21.995)
P: (-116.186,-63.535,22.879)
C4': (-113.474,-65.367,20.857)
C2': (-113.659,-65.784,18.531)
O2': (-112.401,-66.343,18.218)
N1: (-115.890,-66.814,19.006)
O4: (-119.753,-67.242,18.033)
O2: (-115.448,-68.294,17.381)
C6: (-116.823,-66.141,19.734)
C5: (-118.127,-66.235,19.464)
O3': (-112.344,-63.880,19.328)
N3: (-117.609,-67.735,17.741)
OP1: (-115.324,-62.468,23.452)
OP2: (-117.508,-63.163,22.307)
C2: (-116.277,-67.663,18.012)
C1': (-114.454,-66.805,19.324)
C3': (-113.504,-64.657,19.531)
O5': (-115.379,-64.381,21.840)
O4': (-114.317,-66.509,20.673)
C5': (-114.001,-64.579,21.995)
P: (-116.186,-63.535,22.879)
C4': (-113.474,-65.367,20.857)
C2': (-113.659,-65.784,18.531)
O2': (-112.401,-66.343,18.218)
N1: (-115.890,-66.814,19.006)
O4: (-119.753,-67.242,18.033)
O2: (-115.448,-68.294,17.381)
C6: (-116.823,-66.141,19.734)
C5: (-118.127,-66.235,19.464)
O3': (-112.344,-63.880,19.328)
Image (generated by PyMOL):