Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02000:02489
Extra
PDB:
ATOM 1 O3' G A1999 47.221 153.082 83.636 1.00 29.53 O
ATOM 2 P A A2000 46.103 151.940 83.759 1.00 27.02 P
ATOM 3 OP1 A A2000 46.132 151.223 82.467 1.00 27.27 O
ATOM 4 OP2 A A2000 44.832 152.529 84.245 1.00 24.73 O
ATOM 5 O5' A A2000 46.689 151.007 84.903 1.00 27.21 O
ATOM 6 C5' A A2000 47.082 149.652 84.636 1.00 28.42 C
ATOM 7 C4' A A2000 48.539 149.593 84.238 1.00 28.01 C
ATOM 8 O4' A A2000 49.323 150.516 85.030 1.00 27.91 O
ATOM 9 C3' A A2000 49.176 148.234 84.457 1.00 28.31 C
ATOM 10 O3' A A2000 48.957 147.378 83.352 1.00 28.25 O
ATOM 11 C2' A A2000 50.635 148.579 84.694 1.00 27.63 C
ATOM 12 O2' A A2000 51.334 148.836 83.498 1.00 28.11 O
ATOM 13 C1' A A2000 50.494 149.869 85.501 1.00 27.45 C
ATOM 14 N9 A A2000 50.318 149.631 86.934 1.00 27.41 N
ATOM 15 C8 A A2000 49.307 150.096 87.734 1.00 26.97 C
ATOM 16 N7 A A2000 49.406 149.720 88.982 1.00 28.56 N
ATOM 17 C5 A A2000 50.562 148.955 89.010 1.00 28.75 C
ATOM 18 C6 A A2000 51.219 148.268 90.046 1.00 29.63 C
ATOM 19 N6 A A2000 50.790 148.238 91.310 1.00 31.51 N
ATOM 20 N1 A A2000 52.348 147.600 89.737 1.00 30.31 N
ATOM 21 C2 A A2000 52.779 147.621 88.478 1.00 29.08 C
ATOM 22 N3 A A2000 52.254 148.230 87.419 1.00 31.16 N
ATOM 23 C4 A A2000 51.133 148.890 87.757 1.00 28.74 C
ATOM 24 P A A2001 48.247 145.961 83.582 1.00 29.02 P
ATOM 25 OP1 A A2001 47.963 145.422 82.229 1.00 29.05 O
ATOM 26 OP2 A A2001 47.139 146.135 84.561 1.00 27.78 O
ATOM 27 O5' A A2001 49.390 145.078 84.242 1.00 27.09 O
TER
ATOM 1 O3' C B2488 58.639 142.986 95.273 1.00 31.35 O
ATOM 2 P U B2489 58.622 143.929 96.577 1.00 31.97 P
ATOM 3 OP1 U B2489 59.717 144.920 96.441 1.00 33.17 O
ATOM 4 OP2 U B2489 58.540 143.095 97.806 1.00 32.06 O
ATOM 5 O5' U B2489 57.262 144.732 96.428 1.00 28.89 O
ATOM 6 C5' U B2489 56.835 145.610 97.454 1.00 28.11 C
ATOM 7 C4' U B2489 55.469 146.146 97.141 1.00 30.36 C
ATOM 8 O4' U B2489 55.535 146.888 95.893 1.00 31.56 O
ATOM 9 C3' U B2489 54.333 145.134 96.982 1.00 28.52 C
ATOM 10 O3' U B2489 53.157 145.729 97.499 1.00 30.83 O
ATOM 11 C2' U B2489 54.182 145.026 95.468 1.00 29.21 C
ATOM 12 O2' U B2489 52.868 144.706 95.070 1.00 22.95 O
ATOM 13 C1' U B2489 54.496 146.455 95.040 1.00 31.05 C
ATOM 14 N1 U B2489 54.935 146.600 93.647 1.00 32.96 N
ATOM 15 C2 U B2489 53.976 146.912 92.708 1.00 33.74 C
ATOM 16 O2 U B2489 52.797 147.027 92.978 1.00 35.13 O
ATOM 17 N3 U B2489 54.448 147.080 91.437 1.00 35.37 N
ATOM 18 C4 U B2489 55.748 146.962 91.014 1.00 37.16 C
ATOM 19 O4 U B2489 56.019 147.181 89.834 1.00 41.44 O
ATOM 20 C5 U B2489 56.678 146.612 92.037 1.00 37.03 C
ATOM 21 C6 U B2489 56.250 146.447 93.288 1.00 35.03 C
ATOM 22 P A B2490 52.461 145.121 98.809 1.00 32.59 P
ATOM 23 OP1 A B2490 51.887 146.258 99.550 1.00 33.69 O
ATOM 24 OP2 A B2490 53.402 144.198 99.493 1.00 33.53 O
ATOM 25 O5' A B2490 51.223 144.306 98.236 1.00 32.55 O
TER
ATOM 2 P A A2000 46.103 151.940 83.759 1.00 27.02 P
ATOM 3 OP1 A A2000 46.132 151.223 82.467 1.00 27.27 O
ATOM 4 OP2 A A2000 44.832 152.529 84.245 1.00 24.73 O
ATOM 5 O5' A A2000 46.689 151.007 84.903 1.00 27.21 O
ATOM 6 C5' A A2000 47.082 149.652 84.636 1.00 28.42 C
ATOM 7 C4' A A2000 48.539 149.593 84.238 1.00 28.01 C
ATOM 8 O4' A A2000 49.323 150.516 85.030 1.00 27.91 O
ATOM 9 C3' A A2000 49.176 148.234 84.457 1.00 28.31 C
ATOM 10 O3' A A2000 48.957 147.378 83.352 1.00 28.25 O
ATOM 11 C2' A A2000 50.635 148.579 84.694 1.00 27.63 C
ATOM 12 O2' A A2000 51.334 148.836 83.498 1.00 28.11 O
ATOM 13 C1' A A2000 50.494 149.869 85.501 1.00 27.45 C
ATOM 14 N9 A A2000 50.318 149.631 86.934 1.00 27.41 N
ATOM 15 C8 A A2000 49.307 150.096 87.734 1.00 26.97 C
ATOM 16 N7 A A2000 49.406 149.720 88.982 1.00 28.56 N
ATOM 17 C5 A A2000 50.562 148.955 89.010 1.00 28.75 C
ATOM 18 C6 A A2000 51.219 148.268 90.046 1.00 29.63 C
ATOM 19 N6 A A2000 50.790 148.238 91.310 1.00 31.51 N
ATOM 20 N1 A A2000 52.348 147.600 89.737 1.00 30.31 N
ATOM 21 C2 A A2000 52.779 147.621 88.478 1.00 29.08 C
ATOM 22 N3 A A2000 52.254 148.230 87.419 1.00 31.16 N
ATOM 23 C4 A A2000 51.133 148.890 87.757 1.00 28.74 C
ATOM 24 P A A2001 48.247 145.961 83.582 1.00 29.02 P
ATOM 25 OP1 A A2001 47.963 145.422 82.229 1.00 29.05 O
ATOM 26 OP2 A A2001 47.139 146.135 84.561 1.00 27.78 O
ATOM 27 O5' A A2001 49.390 145.078 84.242 1.00 27.09 O
TER
ATOM 1 O3' C B2488 58.639 142.986 95.273 1.00 31.35 O
ATOM 2 P U B2489 58.622 143.929 96.577 1.00 31.97 P
ATOM 3 OP1 U B2489 59.717 144.920 96.441 1.00 33.17 O
ATOM 4 OP2 U B2489 58.540 143.095 97.806 1.00 32.06 O
ATOM 5 O5' U B2489 57.262 144.732 96.428 1.00 28.89 O
ATOM 6 C5' U B2489 56.835 145.610 97.454 1.00 28.11 C
ATOM 7 C4' U B2489 55.469 146.146 97.141 1.00 30.36 C
ATOM 8 O4' U B2489 55.535 146.888 95.893 1.00 31.56 O
ATOM 9 C3' U B2489 54.333 145.134 96.982 1.00 28.52 C
ATOM 10 O3' U B2489 53.157 145.729 97.499 1.00 30.83 O
ATOM 11 C2' U B2489 54.182 145.026 95.468 1.00 29.21 C
ATOM 12 O2' U B2489 52.868 144.706 95.070 1.00 22.95 O
ATOM 13 C1' U B2489 54.496 146.455 95.040 1.00 31.05 C
ATOM 14 N1 U B2489 54.935 146.600 93.647 1.00 32.96 N
ATOM 15 C2 U B2489 53.976 146.912 92.708 1.00 33.74 C
ATOM 16 O2 U B2489 52.797 147.027 92.978 1.00 35.13 O
ATOM 17 N3 U B2489 54.448 147.080 91.437 1.00 35.37 N
ATOM 18 C4 U B2489 55.748 146.962 91.014 1.00 37.16 C
ATOM 19 O4 U B2489 56.019 147.181 89.834 1.00 41.44 O
ATOM 20 C5 U B2489 56.678 146.612 92.037 1.00 37.03 C
ATOM 21 C6 U B2489 56.250 146.447 93.288 1.00 35.03 C
ATOM 22 P A B2490 52.461 145.121 98.809 1.00 32.59 P
ATOM 23 OP1 A B2490 51.887 146.258 99.550 1.00 33.69 O
ATOM 24 OP2 A B2490 53.402 144.198 99.493 1.00 33.53 O
ATOM 25 O5' A B2490 51.223 144.306 98.236 1.00 32.55 O
TER
Atoms:
OP1: (46.132,151.223,82.467)
OP2: (44.832,152.529,84.245)
C3': (49.176,148.234,84.457)
C1': (50.494,149.869,85.501)
C5': (47.082,149.652,84.636)
O4': (49.323,150.516,85.030)
C8: (49.307,150.096,87.734)
O2': (51.334,148.836,83.498)
C6: (51.219,148.268,90.046)
C5: (50.562,148.955,89.010)
C4: (51.133,148.890,87.757)
P: (46.103,151.940,83.759)
C4': (48.539,149.593,84.238)
C2': (50.635,148.579,84.694)
C2: (52.779,147.621,88.478)
N1: (52.348,147.600,89.737)
N3: (52.254,148.230,87.419)
N6: (50.790,148.238,91.310)
N7: (49.406,149.720,88.982)
N9: (50.318,149.631,86.934)
O5': (46.689,151.007,84.903)
O3': (48.957,147.378,83.352)
OP2: (44.832,152.529,84.245)
C3': (49.176,148.234,84.457)
C1': (50.494,149.869,85.501)
C5': (47.082,149.652,84.636)
O4': (49.323,150.516,85.030)
C8: (49.307,150.096,87.734)
O2': (51.334,148.836,83.498)
C6: (51.219,148.268,90.046)
C5: (50.562,148.955,89.010)
C4: (51.133,148.890,87.757)
P: (46.103,151.940,83.759)
C4': (48.539,149.593,84.238)
C2': (50.635,148.579,84.694)
C2: (52.779,147.621,88.478)
N1: (52.348,147.600,89.737)
N3: (52.254,148.230,87.419)
N6: (50.790,148.238,91.310)
N7: (49.406,149.720,88.982)
N9: (50.318,149.631,86.934)
O5': (46.689,151.007,84.903)
O3': (48.957,147.378,83.352)
C4: (55.748,146.962,91.014)
N3: (54.448,147.080,91.437)
OP1: (59.717,144.920,96.441)
OP2: (58.540,143.095,97.806)
C2: (53.976,146.912,92.708)
C1': (54.496,146.455,95.040)
C3': (54.333,145.134,96.982)
O5': (57.262,144.732,96.428)
O4': (55.535,146.888,95.893)
C5': (56.835,145.610,97.454)
P: (58.622,143.929,96.577)
C4': (55.469,146.146,97.141)
C2': (54.182,145.026,95.468)
O2': (52.868,144.706,95.070)
N1: (54.935,146.600,93.647)
O4: (56.019,147.181,89.834)
O2: (52.797,147.027,92.978)
C6: (56.250,146.447,93.288)
C5: (56.678,146.612,92.037)
O3': (53.157,145.729,97.499)
N3: (54.448,147.080,91.437)
OP1: (59.717,144.920,96.441)
OP2: (58.540,143.095,97.806)
C2: (53.976,146.912,92.708)
C1': (54.496,146.455,95.040)
C3': (54.333,145.134,96.982)
O5': (57.262,144.732,96.428)
O4': (55.535,146.888,95.893)
C5': (56.835,145.610,97.454)
P: (58.622,143.929,96.577)
C4': (55.469,146.146,97.141)
C2': (54.182,145.026,95.468)
O2': (52.868,144.706,95.070)
N1: (54.935,146.600,93.647)
O4: (56.019,147.181,89.834)
O2: (52.797,147.027,92.978)
C6: (56.250,146.447,93.288)
C5: (56.678,146.612,92.037)
O3': (53.157,145.729,97.499)
Image (generated by PyMOL):