ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A844:A805

Extra

PDB:
ATOM 1 O3' U A 843 -13.326 103.407 62.368 1.00 47.50 O
ATOM 2 P A A 844 -12.872 101.896 62.662 1.00 64.46 P
ATOM 3 OP1 A A 844 -12.919 101.646 64.128 1.00 54.60 O
ATOM 4 OP2 A A 844 -11.624 101.656 61.897 1.00 60.75 O
ATOM 5 O5' A A 844 -14.035 101.048 61.959 1.00 66.46 O
ATOM 6 C5' A A 844 -15.380 101.219 62.371 1.00 59.61 C
ATOM 7 C4' A A 844 -16.142 99.910 62.282 1.00 63.47 C
ATOM 8 O4' A A 844 -16.354 99.516 60.896 1.00 74.28 O
ATOM 9 C3' A A 844 -15.453 98.720 62.945 1.00 70.25 C
ATOM 10 O3' A A 844 -16.361 98.042 63.809 1.00 77.87 O
ATOM 11 C2' A A 844 -15.113 97.825 61.759 1.00 70.70 C
ATOM 12 O2' A A 844 -15.041 96.467 62.141 1.00 78.55 O
ATOM 13 C1' A A 844 -16.357 98.110 60.929 1.00 74.48 C
ATOM 14 N9 A A 844 -16.408 97.509 59.599 1.00 66.43 N
ATOM 15 C8 A A 844 -17.496 96.893 59.059 1.00 65.81 C
ATOM 16 N7 A A 844 -17.299 96.413 57.859 1.00 62.09 N
ATOM 17 C5 A A 844 -15.980 96.724 57.590 1.00 67.27 C
ATOM 18 C6 A A 844 -15.162 96.478 56.464 1.00 75.75 C
ATOM 19 N6 A A 844 -15.578 95.841 55.362 1.00 72.54 N
ATOM 20 N1 A A 844 -13.892 96.921 56.519 1.00 75.46 N
ATOM 21 C2 A A 844 -13.484 97.564 57.622 1.00 70.56 C
ATOM 22 N3 A A 844 -14.158 97.849 58.737 1.00 65.69 N
ATOM 23 C4 A A 844 -15.415 97.399 58.656 1.00 63.76 C
ATOM 24 P A A 845 -16.404 98.322 65.386 1.00 75.59 P
ATOM 25 OP1 A A 845 -16.910 99.695 65.575 1.00 78.26 O
ATOM 26 OP2 A A 845 -15.104 97.918 65.972 1.00 64.60 O
ATOM 27 O5' A A 845 -17.511 97.278 65.887 1.00 61.24 O
TER

ATOM 1 O3' C B 804 -6.362 93.349 51.102 1.00 81.85 O
ATOM 2 P U B 805 -6.998 94.387 50.078 1.00 90.69 P
ATOM 3 OP1 U B 805 -6.709 93.897 48.714 1.00 78.23 O
ATOM 4 OP2 U B 805 -6.555 95.733 50.503 1.00 91.13 O
ATOM 5 O5' U B 805 -8.568 94.263 50.354 1.00 73.28 O
ATOM 6 C5' U B 805 -9.313 93.296 49.645 1.00 71.85 C
ATOM 7 C4' U B 805 -10.745 93.194 50.145 1.00 78.66 C
ATOM 8 O4' U B 805 -10.738 92.881 51.565 1.00 85.06 O
ATOM 9 C3' U B 805 -11.628 94.434 50.018 1.00 85.79 C
ATOM 10 O3' U B 805 -12.269 94.503 48.750 1.00 94.88 O
ATOM 11 C2' U B 805 -12.671 94.127 51.084 1.00 84.74 C
ATOM 12 O2' U B 805 -13.557 93.105 50.670 1.00 85.92 O
ATOM 13 C1' U B 805 -11.795 93.581 52.201 1.00 87.75 C
ATOM 14 N1 U B 805 -11.223 94.625 53.105 1.00 94.13 N
ATOM 15 C2 U B 805 -12.050 95.338 53.951 1.00 85.94 C
ATOM 16 O2 U B 805 -13.256 95.180 54.007 1.00 91.30 O
ATOM 17 N3 U B 805 -11.409 96.258 54.744 1.00 75.83 N
ATOM 18 C4 U B 805 -10.054 96.538 54.778 1.00 78.16 C
ATOM 19 O4 U B 805 -9.623 97.399 55.541 1.00 75.35 O
ATOM 20 C5 U B 805 -9.256 95.754 53.868 1.00 84.92 C
ATOM 21 C6 U B 805 -9.862 94.851 53.086 1.00 93.53 C
ATOM 22 P A B 806 -11.717 95.424 47.569 1.00107.14 P
ATOM 23 OP1 A B 806 -12.441 95.014 46.349 1.00 92.34 O
ATOM 24 OP2 A B 806 -10.237 95.396 47.601 1.00 76.66 O
ATOM 25 O5' A B 806 -12.175 96.901 47.993 1.00 88.02 O
TER

Atoms:
OP1: (-12.919,101.646,64.128)
OP2: (-11.624,101.656,61.897)
C3': (-15.453,98.720,62.945)
C1': (-16.357,98.110,60.929)
C5': (-15.380,101.219,62.371)
O4': (-16.354,99.516,60.896)
C8: (-17.496,96.893,59.059)
O2': (-15.041,96.467,62.141)
C6: (-15.162,96.478,56.464)
C5: (-15.980,96.724,57.590)
C4: (-15.415,97.399,58.656)
P: (-12.872,101.896,62.662)
C4': (-16.142,99.910,62.282)
C2': (-15.113,97.825,61.759)
C2: (-13.484,97.564,57.622)
N1: (-13.892,96.921,56.519)
N3: (-14.158,97.849,58.737)
N6: (-15.578,95.841,55.362)
N7: (-17.299,96.413,57.859)
N9: (-16.408,97.509,59.599)
O5': (-14.035,101.048,61.959)
O3': (-16.361,98.042,63.809)
C4: (-10.054,96.538,54.778)
N3: (-11.409,96.258,54.744)
OP1: (-6.709,93.897,48.714)
OP2: (-6.555,95.733,50.503)
C2: (-12.050,95.338,53.951)
C1': (-11.795,93.581,52.201)
C3': (-11.628,94.434,50.018)
O5': (-8.568,94.263,50.354)
O4': (-10.738,92.881,51.565)
C5': (-9.313,93.296,49.645)
P: (-6.998,94.387,50.078)
C4': (-10.745,93.194,50.145)
C2': (-12.671,94.127,51.084)
O2': (-13.557,93.105,50.670)
N1: (-11.223,94.625,53.105)
O4: (-9.623,97.399,55.541)
O2: (-13.256,95.180,54.007)
C6: (-9.862,94.851,53.086)
C5: (-9.256,95.754,53.868)
O3': (-12.269,94.503,48.750)
Image (generated by PyMOL):
PyMOL image
show in jmol