Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1929:A2443
Extra
PDB:
ATOM 1 O3' G A1928 52.016 -79.398 -8.638 1.00 33.72 O
ATOM 2 P A A1929 53.467 -80.007 -8.932 1.00 31.31 P
ATOM 3 OP1 A A1929 53.646 -80.022 -10.423 1.00 24.80 O
ATOM 4 OP2 A A1929 53.576 -81.309 -8.160 1.00 16.84 O
ATOM 5 O5' A A1929 54.403 -78.907 -8.289 1.00 22.40 O
ATOM 6 C5' A A1929 55.443 -78.323 -9.036 1.00 28.73 C
ATOM 7 C4' A A1929 55.259 -76.841 -9.152 1.00 26.82 C
ATOM 8 O4' A A1929 54.724 -76.333 -7.926 1.00 22.24 O
ATOM 9 C3' A A1929 56.528 -76.044 -9.344 1.00 30.03 C
ATOM 10 O3' A A1929 56.956 -76.019 -10.691 1.00 31.75 O
ATOM 11 C2' A A1929 56.141 -74.686 -8.795 1.00 24.84 C
ATOM 12 O2' A A1929 55.279 -74.036 -9.689 1.00 27.62 O
ATOM 13 C1' A A1929 55.309 -75.097 -7.618 1.00 19.23 C
ATOM 14 N9 A A1929 56.097 -75.254 -6.403 1.00 25.66 N
ATOM 15 C8 A A1929 56.108 -76.353 -5.591 1.00 27.51 C
ATOM 16 N7 A A1929 56.884 -76.225 -4.548 1.00 28.74 N
ATOM 17 C5 A A1929 57.399 -74.953 -4.700 1.00 26.69 C
ATOM 18 C6 A A1929 58.286 -74.240 -3.908 1.00 24.35 C
ATOM 19 N6 A A1929 58.756 -74.773 -2.802 1.00 27.87 N
ATOM 20 N1 A A1929 58.632 -72.995 -4.296 1.00 25.38 N
ATOM 21 C2 A A1929 58.083 -72.529 -5.449 1.00 31.19 C
ATOM 22 N3 A A1929 57.218 -73.108 -6.310 1.00 26.86 N
ATOM 23 C4 A A1929 56.922 -74.336 -5.847 1.00 27.86 C
ATOM 24 P A A1930 58.420 -76.539 -11.081 1.00 28.72 P
ATOM 25 OP1 A A1930 58.480 -76.622 -12.582 1.00 30.69 O
ATOM 26 OP2 A A1930 58.681 -77.767 -10.281 1.00 21.18 O
ATOM 27 O5' A A1930 59.328 -75.330 -10.578 1.00 30.43 O
TER
ATOM 1 O3' C B2442 63.661 -65.377 1.642 1.00 36.51 O
ATOM 2 P U B2443 64.222 -66.883 1.700 1.00 27.59 P
ATOM 3 OP1 U B2443 64.864 -67.031 3.032 1.00 25.58 O
ATOM 4 OP2 U B2443 65.033 -67.075 0.475 1.00 47.77 O
ATOM 5 O5' U B2443 62.964 -67.823 1.643 1.00 25.50 O
ATOM 6 C5' U B2443 62.650 -68.594 2.788 1.00 31.79 C
ATOM 7 C4' U B2443 62.207 -69.986 2.464 1.00 25.16 C
ATOM 8 O4' U B2443 61.114 -69.938 1.520 1.00 31.50 O
ATOM 9 C3' U B2443 63.257 -70.906 1.876 1.00 21.40 C
ATOM 10 O3' U B2443 63.131 -72.188 2.477 1.00 24.72 O
ATOM 11 C2' U B2443 62.826 -71.028 0.429 1.00 24.29 C
ATOM 12 O2' U B2443 63.186 -72.252 -0.156 1.00 29.70 O
ATOM 13 C1' U B2443 61.314 -70.911 0.553 1.00 25.16 C
ATOM 14 N1 U B2443 60.628 -70.486 -0.681 1.00 27.40 N
ATOM 15 C2 U B2443 60.016 -71.474 -1.471 1.00 30.87 C
ATOM 16 O2 U B2443 59.996 -72.673 -1.214 1.00 30.69 O
ATOM 17 N3 U B2443 59.429 -70.997 -2.600 1.00 26.86 N
ATOM 18 C4 U B2443 59.399 -69.660 -2.962 1.00 30.74 C
ATOM 19 O4 U B2443 58.836 -69.358 -4.003 1.00 35.11 O
ATOM 20 C5 U B2443 60.027 -68.718 -2.098 1.00 24.09 C
ATOM 21 C6 U B2443 60.617 -69.158 -1.008 1.00 25.14 C
ATOM 22 P A B2444 64.175 -72.693 3.585 1.00 31.13 P
ATOM 23 OP1 A B2444 63.726 -74.040 4.039 1.00 20.70 O
ATOM 24 OP2 A B2444 64.308 -71.604 4.587 1.00 27.80 O
ATOM 25 O5' A B2444 65.511 -72.831 2.754 1.00 25.32 O
TER
ATOM 2 P A A1929 53.467 -80.007 -8.932 1.00 31.31 P
ATOM 3 OP1 A A1929 53.646 -80.022 -10.423 1.00 24.80 O
ATOM 4 OP2 A A1929 53.576 -81.309 -8.160 1.00 16.84 O
ATOM 5 O5' A A1929 54.403 -78.907 -8.289 1.00 22.40 O
ATOM 6 C5' A A1929 55.443 -78.323 -9.036 1.00 28.73 C
ATOM 7 C4' A A1929 55.259 -76.841 -9.152 1.00 26.82 C
ATOM 8 O4' A A1929 54.724 -76.333 -7.926 1.00 22.24 O
ATOM 9 C3' A A1929 56.528 -76.044 -9.344 1.00 30.03 C
ATOM 10 O3' A A1929 56.956 -76.019 -10.691 1.00 31.75 O
ATOM 11 C2' A A1929 56.141 -74.686 -8.795 1.00 24.84 C
ATOM 12 O2' A A1929 55.279 -74.036 -9.689 1.00 27.62 O
ATOM 13 C1' A A1929 55.309 -75.097 -7.618 1.00 19.23 C
ATOM 14 N9 A A1929 56.097 -75.254 -6.403 1.00 25.66 N
ATOM 15 C8 A A1929 56.108 -76.353 -5.591 1.00 27.51 C
ATOM 16 N7 A A1929 56.884 -76.225 -4.548 1.00 28.74 N
ATOM 17 C5 A A1929 57.399 -74.953 -4.700 1.00 26.69 C
ATOM 18 C6 A A1929 58.286 -74.240 -3.908 1.00 24.35 C
ATOM 19 N6 A A1929 58.756 -74.773 -2.802 1.00 27.87 N
ATOM 20 N1 A A1929 58.632 -72.995 -4.296 1.00 25.38 N
ATOM 21 C2 A A1929 58.083 -72.529 -5.449 1.00 31.19 C
ATOM 22 N3 A A1929 57.218 -73.108 -6.310 1.00 26.86 N
ATOM 23 C4 A A1929 56.922 -74.336 -5.847 1.00 27.86 C
ATOM 24 P A A1930 58.420 -76.539 -11.081 1.00 28.72 P
ATOM 25 OP1 A A1930 58.480 -76.622 -12.582 1.00 30.69 O
ATOM 26 OP2 A A1930 58.681 -77.767 -10.281 1.00 21.18 O
ATOM 27 O5' A A1930 59.328 -75.330 -10.578 1.00 30.43 O
TER
ATOM 1 O3' C B2442 63.661 -65.377 1.642 1.00 36.51 O
ATOM 2 P U B2443 64.222 -66.883 1.700 1.00 27.59 P
ATOM 3 OP1 U B2443 64.864 -67.031 3.032 1.00 25.58 O
ATOM 4 OP2 U B2443 65.033 -67.075 0.475 1.00 47.77 O
ATOM 5 O5' U B2443 62.964 -67.823 1.643 1.00 25.50 O
ATOM 6 C5' U B2443 62.650 -68.594 2.788 1.00 31.79 C
ATOM 7 C4' U B2443 62.207 -69.986 2.464 1.00 25.16 C
ATOM 8 O4' U B2443 61.114 -69.938 1.520 1.00 31.50 O
ATOM 9 C3' U B2443 63.257 -70.906 1.876 1.00 21.40 C
ATOM 10 O3' U B2443 63.131 -72.188 2.477 1.00 24.72 O
ATOM 11 C2' U B2443 62.826 -71.028 0.429 1.00 24.29 C
ATOM 12 O2' U B2443 63.186 -72.252 -0.156 1.00 29.70 O
ATOM 13 C1' U B2443 61.314 -70.911 0.553 1.00 25.16 C
ATOM 14 N1 U B2443 60.628 -70.486 -0.681 1.00 27.40 N
ATOM 15 C2 U B2443 60.016 -71.474 -1.471 1.00 30.87 C
ATOM 16 O2 U B2443 59.996 -72.673 -1.214 1.00 30.69 O
ATOM 17 N3 U B2443 59.429 -70.997 -2.600 1.00 26.86 N
ATOM 18 C4 U B2443 59.399 -69.660 -2.962 1.00 30.74 C
ATOM 19 O4 U B2443 58.836 -69.358 -4.003 1.00 35.11 O
ATOM 20 C5 U B2443 60.027 -68.718 -2.098 1.00 24.09 C
ATOM 21 C6 U B2443 60.617 -69.158 -1.008 1.00 25.14 C
ATOM 22 P A B2444 64.175 -72.693 3.585 1.00 31.13 P
ATOM 23 OP1 A B2444 63.726 -74.040 4.039 1.00 20.70 O
ATOM 24 OP2 A B2444 64.308 -71.604 4.587 1.00 27.80 O
ATOM 25 O5' A B2444 65.511 -72.831 2.754 1.00 25.32 O
TER
Atoms:
OP1: (53.646,-80.022,-10.423)
OP2: (53.576,-81.309,-8.160)
C3': (56.528,-76.044,-9.344)
C1': (55.309,-75.097,-7.618)
C5': (55.443,-78.323,-9.036)
O4': (54.724,-76.333,-7.926)
C8: (56.108,-76.353,-5.591)
O2': (55.279,-74.036,-9.689)
C6: (58.286,-74.240,-3.908)
C5: (57.399,-74.953,-4.700)
C4: (56.922,-74.336,-5.847)
P: (53.467,-80.007,-8.932)
C4': (55.259,-76.841,-9.152)
C2': (56.141,-74.686,-8.795)
C2: (58.083,-72.529,-5.449)
N1: (58.632,-72.995,-4.296)
N3: (57.218,-73.108,-6.310)
N6: (58.756,-74.773,-2.802)
N7: (56.884,-76.225,-4.548)
N9: (56.097,-75.254,-6.403)
O5': (54.403,-78.907,-8.289)
O3': (56.956,-76.019,-10.691)
OP2: (53.576,-81.309,-8.160)
C3': (56.528,-76.044,-9.344)
C1': (55.309,-75.097,-7.618)
C5': (55.443,-78.323,-9.036)
O4': (54.724,-76.333,-7.926)
C8: (56.108,-76.353,-5.591)
O2': (55.279,-74.036,-9.689)
C6: (58.286,-74.240,-3.908)
C5: (57.399,-74.953,-4.700)
C4: (56.922,-74.336,-5.847)
P: (53.467,-80.007,-8.932)
C4': (55.259,-76.841,-9.152)
C2': (56.141,-74.686,-8.795)
C2: (58.083,-72.529,-5.449)
N1: (58.632,-72.995,-4.296)
N3: (57.218,-73.108,-6.310)
N6: (58.756,-74.773,-2.802)
N7: (56.884,-76.225,-4.548)
N9: (56.097,-75.254,-6.403)
O5': (54.403,-78.907,-8.289)
O3': (56.956,-76.019,-10.691)
C4: (59.399,-69.660,-2.962)
N3: (59.429,-70.997,-2.600)
OP1: (64.864,-67.031,3.032)
OP2: (65.033,-67.075,0.475)
C2: (60.016,-71.474,-1.471)
C1': (61.314,-70.911,0.553)
C3': (63.257,-70.906,1.876)
O5': (62.964,-67.823,1.643)
O4': (61.114,-69.938,1.520)
C5': (62.650,-68.594,2.788)
P: (64.222,-66.883,1.700)
C4': (62.207,-69.986,2.464)
C2': (62.826,-71.028,0.429)
O2': (63.186,-72.252,-0.156)
N1: (60.628,-70.486,-0.681)
O4: (58.836,-69.358,-4.003)
O2: (59.996,-72.673,-1.214)
C6: (60.617,-69.158,-1.008)
C5: (60.027,-68.718,-2.098)
O3': (63.131,-72.188,2.477)
N3: (59.429,-70.997,-2.600)
OP1: (64.864,-67.031,3.032)
OP2: (65.033,-67.075,0.475)
C2: (60.016,-71.474,-1.471)
C1': (61.314,-70.911,0.553)
C3': (63.257,-70.906,1.876)
O5': (62.964,-67.823,1.643)
O4': (61.114,-69.938,1.520)
C5': (62.650,-68.594,2.788)
P: (64.222,-66.883,1.700)
C4': (62.207,-69.986,2.464)
C2': (62.826,-71.028,0.429)
O2': (63.186,-72.252,-0.156)
N1: (60.628,-70.486,-0.681)
O4: (58.836,-69.358,-4.003)
O2: (59.996,-72.673,-1.214)
C6: (60.617,-69.158,-1.008)
C5: (60.027,-68.718,-2.098)
O3': (63.131,-72.188,2.477)
Image (generated by PyMOL):