ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:R45:R50

Extra

PDB:
ATOM 1 O3' G A 44 6.207 22.435 55.611 1.00 43.30 O
ATOM 2 P A A 45 6.101 23.759 54.715 1.00 43.69 P
ATOM 3 OP1 A A 45 4.767 23.787 54.071 1.00 43.15 O
ATOM 4 OP2 A A 45 7.314 23.869 53.863 1.00 44.04 O
ATOM 5 O5' A A 45 6.170 24.892 55.844 1.00 43.02 O
ATOM 6 C5' A A 45 5.037 25.214 56.626 1.00 42.79 C
ATOM 7 C4' A A 45 5.330 26.353 57.585 1.00 42.56 C
ATOM 8 O4' A A 45 6.295 25.933 58.583 1.00 42.10 O
ATOM 9 C3' A A 45 5.980 27.589 56.986 1.00 42.82 C
ATOM 10 O3' A A 45 5.026 28.391 56.305 1.00 43.68 O
ATOM 11 C2' A A 45 6.504 28.248 58.256 1.00 42.22 C
ATOM 12 O2' A A 45 5.471 28.782 59.058 1.00 42.78 O
ATOM 13 C1' A A 45 7.103 27.037 58.958 1.00 41.37 C
ATOM 14 N9 A A 45 8.496 26.762 58.600 1.00 39.91 N
ATOM 15 C8 A A 45 8.960 25.703 57.874 1.00 39.65 C
ATOM 16 N7 A A 45 10.258 25.692 57.700 1.00 39.19 N
ATOM 17 C5 A A 45 10.677 26.831 58.354 1.00 39.13 C
ATOM 18 C6 A A 45 11.953 27.393 58.537 1.00 39.19 C
ATOM 19 N6 A A 45 13.064 26.839 58.045 1.00 39.27 N
ATOM 20 N1 A A 45 12.038 28.541 59.247 1.00 39.23 N
ATOM 21 C2 A A 45 10.916 29.090 59.734 1.00 39.11 C
ATOM 22 N3 A A 45 9.662 28.650 59.623 1.00 39.23 N
ATOM 23 C4 A A 45 9.608 27.504 58.919 1.00 39.38 C
ATOM 24 P G A 46 5.434 29.197 54.983 1.00 44.19 P
ATOM 25 OP1 G A 46 4.229 29.941 54.545 1.00 43.70 O
ATOM 26 OP2 G A 46 6.083 28.257 54.042 1.00 44.13 O
ATOM 27 O5' G A 46 6.531 30.231 55.519 1.00 44.11 O
TER

ATOM 1 O3' U B 49 19.896 35.590 58.074 1.00 65.92 O
ATOM 2 P U B 50 18.625 34.870 58.725 1.00 63.58 P
ATOM 3 OP1 U B 50 17.411 35.277 57.984 1.00 63.71 O
ATOM 4 OP2 U B 50 18.683 35.066 60.188 1.00 63.91 O
ATOM 5 O5' U B 50 18.901 33.328 58.427 1.00 62.02 O
ATOM 6 C5' U B 50 20.015 32.613 58.971 1.00 59.11 C
ATOM 7 C4' U B 50 19.872 31.131 58.654 1.00 57.09 C
ATOM 8 O4' U B 50 18.808 30.551 59.456 1.00 56.18 O
ATOM 9 C3' U B 50 19.508 30.799 57.208 1.00 56.67 C
ATOM 10 O3' U B 50 20.017 29.524 56.811 1.00 56.87 O
ATOM 11 C2' U B 50 17.981 30.768 57.272 1.00 55.91 C
ATOM 12 O2' U B 50 17.398 30.025 56.220 1.00 55.59 O
ATOM 13 C1' U B 50 17.747 30.102 58.631 1.00 55.37 C
ATOM 14 N1 U B 50 16.426 30.443 59.275 1.00 54.58 N
ATOM 15 C2 U B 50 15.365 29.546 59.219 1.00 54.03 C
ATOM 16 O2 U B 50 15.406 28.460 58.668 1.00 53.85 O
ATOM 17 N3 U B 50 14.211 29.969 59.834 1.00 53.49 N
ATOM 18 C4 U B 50 14.003 31.166 60.496 1.00 53.60 C
ATOM 19 O4 U B 50 12.908 31.397 61.003 1.00 53.38 O
ATOM 20 C5 U B 50 15.147 32.047 60.522 1.00 53.78 C
ATOM 21 C6 U B 50 16.285 31.661 59.926 1.00 54.16 C
ATOM 22 P C B 51 21.567 29.195 56.601 1.00 56.56 P
ATOM 23 OP1 C B 51 21.635 27.858 55.968 1.00 56.84 O
ATOM 24 OP2 C B 51 22.284 29.409 57.879 1.00 56.55 O
ATOM 25 O5' C B 51 22.026 30.313 55.556 1.00 56.92 O
TER

Atoms:
OP1: (4.767,23.787,54.071)
OP2: (7.314,23.869,53.863)
C3': (5.980,27.589,56.986)
C1': (7.103,27.037,58.958)
C5': (5.037,25.214,56.626)
O4': (6.295,25.933,58.583)
C8: (8.960,25.703,57.874)
O2': (5.471,28.782,59.058)
C6: (11.953,27.393,58.537)
C5: (10.677,26.831,58.354)
C4: (9.608,27.504,58.919)
P: (6.101,23.759,54.715)
C4': (5.330,26.353,57.585)
C2': (6.504,28.248,58.256)
C2: (10.916,29.090,59.734)
N1: (12.038,28.541,59.247)
N3: (9.662,28.650,59.623)
N6: (13.064,26.839,58.045)
N7: (10.258,25.692,57.700)
N9: (8.496,26.762,58.600)
O5': (6.170,24.892,55.844)
O3': (5.026,28.391,56.305)
C4: (14.003,31.166,60.496)
N3: (14.211,29.969,59.834)
OP1: (17.411,35.277,57.984)
OP2: (18.683,35.066,60.188)
C2: (15.365,29.546,59.219)
C1': (17.747,30.102,58.631)
C3': (19.508,30.799,57.208)
O5': (18.901,33.328,58.427)
O4': (18.808,30.551,59.456)
C5': (20.015,32.613,58.971)
P: (18.625,34.870,58.725)
C4': (19.872,31.131,58.654)
C2': (17.981,30.768,57.272)
O2': (17.398,30.025,56.220)
N1: (16.426,30.443,59.275)
O4: (12.908,31.397,61.003)
O2: (15.406,28.460,58.668)
C6: (16.285,31.661,59.926)
C5: (15.147,32.047,60.522)
O3': (20.017,29.524,56.811)
Image (generated by PyMOL):
PyMOL image
show in jmol