Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2000:A2489
Extra
PDB:
ATOM 1 O3' G A1999 47.345 153.332 83.849 1.00 35.96 O
ATOM 2 P A A2000 46.282 152.133 84.017 1.00 35.48 P
ATOM 3 OP1 A A2000 46.275 151.416 82.733 1.00 35.81 O
ATOM 4 OP2 A A2000 45.015 152.651 84.585 1.00 35.01 O
ATOM 5 O5' A A2000 46.956 151.199 85.113 1.00 33.95 O
ATOM 6 C5' A A2000 47.260 149.800 84.853 1.00 31.73 C
ATOM 7 C4' A A2000 48.735 149.638 84.520 1.00 31.97 C
ATOM 8 O4' A A2000 49.537 150.617 85.237 1.00 31.46 O
ATOM 9 C3' A A2000 49.361 148.278 84.810 1.00 31.73 C
ATOM 10 O3' A A2000 49.254 147.409 83.691 1.00 32.45 O
ATOM 11 C2' A A2000 50.820 148.640 85.052 1.00 30.38 C
ATOM 12 O2' A A2000 51.507 148.789 83.839 1.00 30.14 O
ATOM 13 C1' A A2000 50.706 150.002 85.746 1.00 30.23 C
ATOM 14 N9 A A2000 50.527 149.864 87.193 1.00 30.23 N
ATOM 15 C8 A A2000 49.512 150.404 87.943 1.00 30.92 C
ATOM 16 N7 A A2000 49.531 150.043 89.196 1.00 31.69 N
ATOM 17 C5 A A2000 50.643 149.225 89.290 1.00 30.88 C
ATOM 18 C6 A A2000 51.189 148.515 90.362 1.00 30.81 C
ATOM 19 N6 A A2000 50.649 148.486 91.574 1.00 30.89 N
ATOM 20 N1 A A2000 52.313 147.815 90.143 1.00 30.72 N
ATOM 21 C2 A A2000 52.832 147.819 88.918 1.00 29.76 C
ATOM 22 N3 A A2000 52.397 148.430 87.818 1.00 30.18 N
ATOM 23 C4 A A2000 51.284 149.129 88.073 1.00 29.96 C
ATOM 24 P A A2001 48.709 145.903 83.874 1.00 34.92 P
ATOM 25 OP1 A A2001 48.509 145.265 82.551 1.00 34.39 O
ATOM 26 OP2 A A2001 47.593 145.965 84.839 1.00 35.36 O
ATOM 27 O5' A A2001 49.910 145.108 84.531 1.00 34.76 O
TER
ATOM 1 O3' C B2488 58.832 143.240 95.752 1.00 37.29 O
ATOM 2 P U B2489 58.735 144.134 97.059 1.00 35.79 P
ATOM 3 OP1 U B2489 59.569 145.296 96.739 1.00 35.39 O
ATOM 4 OP2 U B2489 59.044 143.295 98.244 1.00 35.57 O
ATOM 5 O5' U B2489 57.236 144.649 97.121 1.00 34.85 O
ATOM 6 C5' U B2489 56.931 145.788 97.928 1.00 34.78 C
ATOM 7 C4' U B2489 55.587 146.360 97.574 1.00 34.93 C
ATOM 8 O4' U B2489 55.634 147.038 96.297 1.00 34.56 O
ATOM 9 C3' U B2489 54.442 145.377 97.492 1.00 34.25 C
ATOM 10 O3' U B2489 53.322 146.041 98.014 1.00 33.68 O
ATOM 11 C2' U B2489 54.309 145.150 95.996 1.00 34.64 C
ATOM 12 O2' U B2489 53.022 144.696 95.627 1.00 33.80 O
ATOM 13 C1' U B2489 54.599 146.553 95.478 1.00 34.44 C
ATOM 14 N1 U B2489 55.044 146.650 94.085 1.00 34.90 N
ATOM 15 C2 U B2489 54.103 146.999 93.142 1.00 35.01 C
ATOM 16 O2 U B2489 52.934 147.174 93.411 1.00 35.37 O
ATOM 17 N3 U B2489 54.588 147.140 91.875 1.00 34.46 N
ATOM 18 C4 U B2489 55.894 146.972 91.465 1.00 35.17 C
ATOM 19 O4 U B2489 56.206 147.277 90.314 1.00 36.60 O
ATOM 20 C5 U B2489 56.798 146.578 92.494 1.00 34.91 C
ATOM 21 C6 U B2489 56.354 146.430 93.736 1.00 34.38 C
ATOM 22 P A B2490 52.514 145.366 99.200 1.00 34.44 P
ATOM 23 OP1 A B2490 51.662 146.381 99.858 1.00 37.45 O
ATOM 24 OP2 A B2490 53.489 144.615 99.996 1.00 35.90 O
ATOM 25 O5' A B2490 51.557 144.386 98.399 1.00 36.38 O
TER
ATOM 2 P A A2000 46.282 152.133 84.017 1.00 35.48 P
ATOM 3 OP1 A A2000 46.275 151.416 82.733 1.00 35.81 O
ATOM 4 OP2 A A2000 45.015 152.651 84.585 1.00 35.01 O
ATOM 5 O5' A A2000 46.956 151.199 85.113 1.00 33.95 O
ATOM 6 C5' A A2000 47.260 149.800 84.853 1.00 31.73 C
ATOM 7 C4' A A2000 48.735 149.638 84.520 1.00 31.97 C
ATOM 8 O4' A A2000 49.537 150.617 85.237 1.00 31.46 O
ATOM 9 C3' A A2000 49.361 148.278 84.810 1.00 31.73 C
ATOM 10 O3' A A2000 49.254 147.409 83.691 1.00 32.45 O
ATOM 11 C2' A A2000 50.820 148.640 85.052 1.00 30.38 C
ATOM 12 O2' A A2000 51.507 148.789 83.839 1.00 30.14 O
ATOM 13 C1' A A2000 50.706 150.002 85.746 1.00 30.23 C
ATOM 14 N9 A A2000 50.527 149.864 87.193 1.00 30.23 N
ATOM 15 C8 A A2000 49.512 150.404 87.943 1.00 30.92 C
ATOM 16 N7 A A2000 49.531 150.043 89.196 1.00 31.69 N
ATOM 17 C5 A A2000 50.643 149.225 89.290 1.00 30.88 C
ATOM 18 C6 A A2000 51.189 148.515 90.362 1.00 30.81 C
ATOM 19 N6 A A2000 50.649 148.486 91.574 1.00 30.89 N
ATOM 20 N1 A A2000 52.313 147.815 90.143 1.00 30.72 N
ATOM 21 C2 A A2000 52.832 147.819 88.918 1.00 29.76 C
ATOM 22 N3 A A2000 52.397 148.430 87.818 1.00 30.18 N
ATOM 23 C4 A A2000 51.284 149.129 88.073 1.00 29.96 C
ATOM 24 P A A2001 48.709 145.903 83.874 1.00 34.92 P
ATOM 25 OP1 A A2001 48.509 145.265 82.551 1.00 34.39 O
ATOM 26 OP2 A A2001 47.593 145.965 84.839 1.00 35.36 O
ATOM 27 O5' A A2001 49.910 145.108 84.531 1.00 34.76 O
TER
ATOM 1 O3' C B2488 58.832 143.240 95.752 1.00 37.29 O
ATOM 2 P U B2489 58.735 144.134 97.059 1.00 35.79 P
ATOM 3 OP1 U B2489 59.569 145.296 96.739 1.00 35.39 O
ATOM 4 OP2 U B2489 59.044 143.295 98.244 1.00 35.57 O
ATOM 5 O5' U B2489 57.236 144.649 97.121 1.00 34.85 O
ATOM 6 C5' U B2489 56.931 145.788 97.928 1.00 34.78 C
ATOM 7 C4' U B2489 55.587 146.360 97.574 1.00 34.93 C
ATOM 8 O4' U B2489 55.634 147.038 96.297 1.00 34.56 O
ATOM 9 C3' U B2489 54.442 145.377 97.492 1.00 34.25 C
ATOM 10 O3' U B2489 53.322 146.041 98.014 1.00 33.68 O
ATOM 11 C2' U B2489 54.309 145.150 95.996 1.00 34.64 C
ATOM 12 O2' U B2489 53.022 144.696 95.627 1.00 33.80 O
ATOM 13 C1' U B2489 54.599 146.553 95.478 1.00 34.44 C
ATOM 14 N1 U B2489 55.044 146.650 94.085 1.00 34.90 N
ATOM 15 C2 U B2489 54.103 146.999 93.142 1.00 35.01 C
ATOM 16 O2 U B2489 52.934 147.174 93.411 1.00 35.37 O
ATOM 17 N3 U B2489 54.588 147.140 91.875 1.00 34.46 N
ATOM 18 C4 U B2489 55.894 146.972 91.465 1.00 35.17 C
ATOM 19 O4 U B2489 56.206 147.277 90.314 1.00 36.60 O
ATOM 20 C5 U B2489 56.798 146.578 92.494 1.00 34.91 C
ATOM 21 C6 U B2489 56.354 146.430 93.736 1.00 34.38 C
ATOM 22 P A B2490 52.514 145.366 99.200 1.00 34.44 P
ATOM 23 OP1 A B2490 51.662 146.381 99.858 1.00 37.45 O
ATOM 24 OP2 A B2490 53.489 144.615 99.996 1.00 35.90 O
ATOM 25 O5' A B2490 51.557 144.386 98.399 1.00 36.38 O
TER
Atoms:
OP1: (46.275,151.416,82.733)
OP2: (45.015,152.651,84.585)
C3': (49.361,148.278,84.810)
C1': (50.706,150.002,85.746)
C5': (47.260,149.800,84.853)
O4': (49.537,150.617,85.237)
C8: (49.512,150.404,87.943)
O2': (51.507,148.789,83.839)
C6: (51.189,148.515,90.362)
C5: (50.643,149.225,89.290)
C4: (51.284,149.129,88.073)
P: (46.282,152.133,84.017)
C4': (48.735,149.638,84.520)
C2': (50.820,148.640,85.052)
C2: (52.832,147.819,88.918)
N1: (52.313,147.815,90.143)
N3: (52.397,148.430,87.818)
N6: (50.649,148.486,91.574)
N7: (49.531,150.043,89.196)
N9: (50.527,149.864,87.193)
O5': (46.956,151.199,85.113)
O3': (49.254,147.409,83.691)
OP2: (45.015,152.651,84.585)
C3': (49.361,148.278,84.810)
C1': (50.706,150.002,85.746)
C5': (47.260,149.800,84.853)
O4': (49.537,150.617,85.237)
C8: (49.512,150.404,87.943)
O2': (51.507,148.789,83.839)
C6: (51.189,148.515,90.362)
C5: (50.643,149.225,89.290)
C4: (51.284,149.129,88.073)
P: (46.282,152.133,84.017)
C4': (48.735,149.638,84.520)
C2': (50.820,148.640,85.052)
C2: (52.832,147.819,88.918)
N1: (52.313,147.815,90.143)
N3: (52.397,148.430,87.818)
N6: (50.649,148.486,91.574)
N7: (49.531,150.043,89.196)
N9: (50.527,149.864,87.193)
O5': (46.956,151.199,85.113)
O3': (49.254,147.409,83.691)
C4: (55.894,146.972,91.465)
N3: (54.588,147.140,91.875)
OP1: (59.569,145.296,96.739)
OP2: (59.044,143.295,98.244)
C2: (54.103,146.999,93.142)
C1': (54.599,146.553,95.478)
C3': (54.442,145.377,97.492)
O5': (57.236,144.649,97.121)
O4': (55.634,147.038,96.297)
C5': (56.931,145.788,97.928)
P: (58.735,144.134,97.059)
C4': (55.587,146.360,97.574)
C2': (54.309,145.150,95.996)
O2': (53.022,144.696,95.627)
N1: (55.044,146.650,94.085)
O4: (56.206,147.277,90.314)
O2: (52.934,147.174,93.411)
C6: (56.354,146.430,93.736)
C5: (56.798,146.578,92.494)
O3': (53.322,146.041,98.014)
N3: (54.588,147.140,91.875)
OP1: (59.569,145.296,96.739)
OP2: (59.044,143.295,98.244)
C2: (54.103,146.999,93.142)
C1': (54.599,146.553,95.478)
C3': (54.442,145.377,97.492)
O5': (57.236,144.649,97.121)
O4': (55.634,147.038,96.297)
C5': (56.931,145.788,97.928)
P: (58.735,144.134,97.059)
C4': (55.587,146.360,97.574)
C2': (54.309,145.150,95.996)
O2': (53.022,144.696,95.627)
N1: (55.044,146.650,94.085)
O4: (56.206,147.277,90.314)
O2: (52.934,147.174,93.411)
C6: (56.354,146.430,93.736)
C5: (56.798,146.578,92.494)
O3': (53.322,146.041,98.014)
Image (generated by PyMOL):