Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:D35:D31
Extra
PDB:
ATOM 1 O3' A A 34 123.698 84.368 1.467 1.00 55.36 O
ATOM 2 P A A 35 123.599 83.734 2.941 1.00 56.32 P
ATOM 3 OP1 A A 35 122.220 83.937 3.458 1.00 57.25 O
ATOM 4 OP2 A A 35 124.762 84.214 3.737 1.00 54.77 O
ATOM 5 O5' A A 35 123.755 82.177 2.688 1.00 55.98 O
ATOM 6 C5' A A 35 122.837 81.480 1.861 1.00 54.96 C
ATOM 7 C4' A A 35 123.463 80.203 1.385 1.00 53.74 C
ATOM 8 O4' A A 35 124.559 80.529 0.498 1.00 53.34 O
ATOM 9 C3' A A 35 124.105 79.389 2.496 1.00 53.53 C
ATOM 10 O3' A A 35 123.147 78.543 3.124 1.00 53.58 O
ATOM 11 C2' A A 35 125.168 78.587 1.756 1.00 53.70 C
ATOM 12 O2' A A 35 124.673 77.382 1.209 1.00 54.63 O
ATOM 13 C1' A A 35 125.572 79.553 0.636 1.00 53.66 C
ATOM 14 N9 A A 35 126.852 80.222 0.853 1.00 52.64 N
ATOM 15 C8 A A 35 127.855 80.391 -0.061 1.00 52.55 C
ATOM 16 N7 A A 35 128.926 80.961 0.432 1.00 52.03 N
ATOM 17 C5 A A 35 128.595 81.197 1.754 1.00 51.75 C
ATOM 18 C6 A A 35 129.310 81.765 2.810 1.00 52.83 C
ATOM 19 N6 A A 35 130.566 82.204 2.695 1.00 54.52 N
ATOM 20 N1 A A 35 128.694 81.862 4.004 1.00 51.48 N
ATOM 21 C2 A A 35 127.446 81.406 4.113 1.00 51.16 C
ATOM 22 N3 A A 35 126.673 80.844 3.194 1.00 50.64 N
ATOM 23 C4 A A 35 127.316 80.767 2.023 1.00 51.24 C
ATOM 24 P G A 36 123.248 78.265 4.702 1.00 52.19 P
ATOM 25 OP1 G A 36 123.076 79.576 5.383 1.00 53.78 O
ATOM 26 OP2 G A 36 124.487 77.488 4.906 1.00 52.28 O
ATOM 27 O5' G A 36 122.005 77.319 5.024 1.00 51.04 O
TER
ATOM 1 O3' U B 30 130.788 85.043 13.402 1.00 60.95 O
ATOM 2 P U B 31 131.038 86.305 12.437 1.00 58.75 P
ATOM 3 OP1 U B 31 132.066 87.135 13.132 1.00 59.59 O
ATOM 4 OP2 U B 31 129.760 86.920 12.015 1.00 58.53 O
ATOM 5 O5' U B 31 131.700 85.657 11.145 1.00 57.93 O
ATOM 6 C5' U B 31 133.088 85.363 11.114 1.00 55.25 C
ATOM 7 C4' U B 31 133.498 84.995 9.722 1.00 54.15 C
ATOM 8 O4' U B 31 132.875 83.742 9.358 1.00 53.32 O
ATOM 9 C3' U B 31 132.997 85.938 8.650 1.00 55.59 C
ATOM 10 O3' U B 31 133.807 87.087 8.544 1.00 58.45 O
ATOM 11 C2' U B 31 133.075 85.073 7.404 1.00 54.37 C
ATOM 12 O2' U B 31 134.388 84.951 6.912 1.00 55.40 O
ATOM 13 C1' U B 31 132.625 83.729 7.961 1.00 53.06 C
ATOM 14 N1 U B 31 131.193 83.512 7.734 1.00 52.29 N
ATOM 15 C2 U B 31 130.826 83.128 6.468 1.00 52.61 C
ATOM 16 O2 U B 31 131.637 82.978 5.570 1.00 52.74 O
ATOM 17 N3 U B 31 129.481 82.927 6.290 1.00 51.85 N
ATOM 18 C4 U B 31 128.492 83.073 7.236 1.00 51.85 C
ATOM 19 O4 U B 31 127.327 82.819 6.931 1.00 53.91 O
ATOM 20 C5 U B 31 128.953 83.483 8.528 1.00 50.88 C
ATOM 21 C6 U B 31 130.255 83.682 8.729 1.00 51.28 C
ATOM 22 P U B 32 133.328 88.293 7.607 1.00 60.91 P
ATOM 23 OP1 U B 32 134.327 89.397 7.710 1.00 60.46 O
ATOM 24 OP2 U B 32 131.891 88.567 7.865 1.00 59.90 O
ATOM 25 O5' U B 32 133.391 87.664 6.148 1.00 61.84 O
TER
ATOM 2 P A A 35 123.599 83.734 2.941 1.00 56.32 P
ATOM 3 OP1 A A 35 122.220 83.937 3.458 1.00 57.25 O
ATOM 4 OP2 A A 35 124.762 84.214 3.737 1.00 54.77 O
ATOM 5 O5' A A 35 123.755 82.177 2.688 1.00 55.98 O
ATOM 6 C5' A A 35 122.837 81.480 1.861 1.00 54.96 C
ATOM 7 C4' A A 35 123.463 80.203 1.385 1.00 53.74 C
ATOM 8 O4' A A 35 124.559 80.529 0.498 1.00 53.34 O
ATOM 9 C3' A A 35 124.105 79.389 2.496 1.00 53.53 C
ATOM 10 O3' A A 35 123.147 78.543 3.124 1.00 53.58 O
ATOM 11 C2' A A 35 125.168 78.587 1.756 1.00 53.70 C
ATOM 12 O2' A A 35 124.673 77.382 1.209 1.00 54.63 O
ATOM 13 C1' A A 35 125.572 79.553 0.636 1.00 53.66 C
ATOM 14 N9 A A 35 126.852 80.222 0.853 1.00 52.64 N
ATOM 15 C8 A A 35 127.855 80.391 -0.061 1.00 52.55 C
ATOM 16 N7 A A 35 128.926 80.961 0.432 1.00 52.03 N
ATOM 17 C5 A A 35 128.595 81.197 1.754 1.00 51.75 C
ATOM 18 C6 A A 35 129.310 81.765 2.810 1.00 52.83 C
ATOM 19 N6 A A 35 130.566 82.204 2.695 1.00 54.52 N
ATOM 20 N1 A A 35 128.694 81.862 4.004 1.00 51.48 N
ATOM 21 C2 A A 35 127.446 81.406 4.113 1.00 51.16 C
ATOM 22 N3 A A 35 126.673 80.844 3.194 1.00 50.64 N
ATOM 23 C4 A A 35 127.316 80.767 2.023 1.00 51.24 C
ATOM 24 P G A 36 123.248 78.265 4.702 1.00 52.19 P
ATOM 25 OP1 G A 36 123.076 79.576 5.383 1.00 53.78 O
ATOM 26 OP2 G A 36 124.487 77.488 4.906 1.00 52.28 O
ATOM 27 O5' G A 36 122.005 77.319 5.024 1.00 51.04 O
TER
ATOM 1 O3' U B 30 130.788 85.043 13.402 1.00 60.95 O
ATOM 2 P U B 31 131.038 86.305 12.437 1.00 58.75 P
ATOM 3 OP1 U B 31 132.066 87.135 13.132 1.00 59.59 O
ATOM 4 OP2 U B 31 129.760 86.920 12.015 1.00 58.53 O
ATOM 5 O5' U B 31 131.700 85.657 11.145 1.00 57.93 O
ATOM 6 C5' U B 31 133.088 85.363 11.114 1.00 55.25 C
ATOM 7 C4' U B 31 133.498 84.995 9.722 1.00 54.15 C
ATOM 8 O4' U B 31 132.875 83.742 9.358 1.00 53.32 O
ATOM 9 C3' U B 31 132.997 85.938 8.650 1.00 55.59 C
ATOM 10 O3' U B 31 133.807 87.087 8.544 1.00 58.45 O
ATOM 11 C2' U B 31 133.075 85.073 7.404 1.00 54.37 C
ATOM 12 O2' U B 31 134.388 84.951 6.912 1.00 55.40 O
ATOM 13 C1' U B 31 132.625 83.729 7.961 1.00 53.06 C
ATOM 14 N1 U B 31 131.193 83.512 7.734 1.00 52.29 N
ATOM 15 C2 U B 31 130.826 83.128 6.468 1.00 52.61 C
ATOM 16 O2 U B 31 131.637 82.978 5.570 1.00 52.74 O
ATOM 17 N3 U B 31 129.481 82.927 6.290 1.00 51.85 N
ATOM 18 C4 U B 31 128.492 83.073 7.236 1.00 51.85 C
ATOM 19 O4 U B 31 127.327 82.819 6.931 1.00 53.91 O
ATOM 20 C5 U B 31 128.953 83.483 8.528 1.00 50.88 C
ATOM 21 C6 U B 31 130.255 83.682 8.729 1.00 51.28 C
ATOM 22 P U B 32 133.328 88.293 7.607 1.00 60.91 P
ATOM 23 OP1 U B 32 134.327 89.397 7.710 1.00 60.46 O
ATOM 24 OP2 U B 32 131.891 88.567 7.865 1.00 59.90 O
ATOM 25 O5' U B 32 133.391 87.664 6.148 1.00 61.84 O
TER
Atoms:
OP1: (122.220,83.937,3.458)
OP2: (124.762,84.214,3.737)
C3': (124.105,79.389,2.496)
C1': (125.572,79.553,0.636)
C5': (122.837,81.480,1.861)
O4': (124.559,80.529,0.498)
C8: (127.855,80.391,-0.061)
O2': (124.673,77.382,1.209)
C6: (129.310,81.765,2.810)
C5: (128.595,81.197,1.754)
C4: (127.316,80.767,2.023)
P: (123.599,83.734,2.941)
C4': (123.463,80.203,1.385)
C2': (125.168,78.587,1.756)
C2: (127.446,81.406,4.113)
N1: (128.694,81.862,4.004)
N3: (126.673,80.844,3.194)
N6: (130.566,82.204,2.695)
N7: (128.926,80.961,0.432)
N9: (126.852,80.222,0.853)
O5': (123.755,82.177,2.688)
O3': (123.147,78.543,3.124)
OP2: (124.762,84.214,3.737)
C3': (124.105,79.389,2.496)
C1': (125.572,79.553,0.636)
C5': (122.837,81.480,1.861)
O4': (124.559,80.529,0.498)
C8: (127.855,80.391,-0.061)
O2': (124.673,77.382,1.209)
C6: (129.310,81.765,2.810)
C5: (128.595,81.197,1.754)
C4: (127.316,80.767,2.023)
P: (123.599,83.734,2.941)
C4': (123.463,80.203,1.385)
C2': (125.168,78.587,1.756)
C2: (127.446,81.406,4.113)
N1: (128.694,81.862,4.004)
N3: (126.673,80.844,3.194)
N6: (130.566,82.204,2.695)
N7: (128.926,80.961,0.432)
N9: (126.852,80.222,0.853)
O5': (123.755,82.177,2.688)
O3': (123.147,78.543,3.124)
C4: (128.492,83.073,7.236)
N3: (129.481,82.927,6.290)
OP1: (132.066,87.135,13.132)
OP2: (129.760,86.920,12.015)
C2: (130.826,83.128,6.468)
C1': (132.625,83.729,7.961)
C3': (132.997,85.938,8.650)
O5': (131.700,85.657,11.145)
O4': (132.875,83.742,9.358)
C5': (133.088,85.363,11.114)
P: (131.038,86.305,12.437)
C4': (133.498,84.995,9.722)
C2': (133.075,85.073,7.404)
O2': (134.388,84.951,6.912)
N1: (131.193,83.512,7.734)
O4: (127.327,82.819,6.931)
O2: (131.637,82.978,5.570)
C6: (130.255,83.682,8.729)
C5: (128.953,83.483,8.528)
O3': (133.807,87.087,8.544)
N3: (129.481,82.927,6.290)
OP1: (132.066,87.135,13.132)
OP2: (129.760,86.920,12.015)
C2: (130.826,83.128,6.468)
C1': (132.625,83.729,7.961)
C3': (132.997,85.938,8.650)
O5': (131.700,85.657,11.145)
O4': (132.875,83.742,9.358)
C5': (133.088,85.363,11.114)
P: (131.038,86.305,12.437)
C4': (133.498,84.995,9.722)
C2': (133.075,85.073,7.404)
O2': (134.388,84.951,6.912)
N1: (131.193,83.512,7.734)
O4: (127.327,82.819,6.931)
O2: (131.637,82.978,5.570)
C6: (130.255,83.682,8.729)
C5: (128.953,83.483,8.528)
O3': (133.807,87.087,8.544)
Image (generated by PyMOL):