Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1929:A2490
Extra
PDB:
ATOM 1 O3' G A1928 -51.142 -80.589 9.234 1.00 0.79 O
ATOM 2 P A A1929 -52.684 -80.962 9.487 1.00 16.98 P
ATOM 3 OP1 A A1929 -52.948 -80.928 10.948 1.00 45.62 O
ATOM 4 OP2 A A1929 -53.015 -82.192 8.714 1.00 45.62 O
ATOM 5 O5' A A1929 -53.452 -79.748 8.809 1.00 0.79 O
ATOM 6 C5' A A1929 -54.700 -79.282 9.317 1.00 0.79 C
ATOM 7 C4' A A1929 -54.621 -77.799 9.583 1.00 0.79 C
ATOM 8 O4' A A1929 -54.065 -77.117 8.426 1.00 0.79 O
ATOM 9 C3' A A1929 -55.966 -77.148 9.847 1.00 0.79 C
ATOM 10 O3' A A1929 -56.285 -77.266 11.230 1.00 0.79 O
ATOM 11 C2' A A1929 -55.734 -75.713 9.377 1.00 0.79 C
ATOM 12 O2' A A1929 -55.109 -74.883 10.338 1.00 0.79 O
ATOM 13 C1' A A1929 -54.767 -75.912 8.200 1.00 0.79 C
ATOM 14 N9 A A1929 -55.446 -76.017 6.902 1.00 14.90 N
ATOM 15 C8 A A1929 -55.358 -77.016 5.963 1.00 14.90 C
ATOM 16 N7 A A1929 -56.128 -76.831 4.919 1.00 14.90 N
ATOM 17 C5 A A1929 -56.760 -75.629 5.187 1.00 14.90 C
ATOM 18 C6 A A1929 -57.705 -74.892 4.482 1.00 14.90 C
ATOM 19 N6 A A1929 -58.207 -75.256 3.319 1.00 14.90 N
ATOM 20 N1 A A1929 -58.131 -73.741 5.021 1.00 14.90 N
ATOM 21 C2 A A1929 -57.629 -73.360 6.193 1.00 14.90 C
ATOM 22 N3 A A1929 -56.737 -73.965 6.957 1.00 14.90 N
ATOM 23 C4 A A1929 -56.340 -75.112 6.393 1.00 14.90 C
ATOM 24 P A A1930 -57.818 -77.346 11.695 1.00 10.66 P
ATOM 25 OP1 A A1930 -57.881 -77.120 13.164 1.00 29.32 O
ATOM 26 OP2 A A1930 -58.430 -78.571 11.126 1.00 29.32 O
ATOM 27 O5' A A1930 -58.462 -76.063 11.015 1.00 12.14 O
TER
ATOM 1 O3' C B2489 -62.682 -66.065 -1.353 1.00 18.58 O
ATOM 2 P U B2490 -63.536 -67.395 -1.057 1.00 20.16 P
ATOM 3 OP1 U B2490 -64.391 -67.666 -2.242 1.00 28.59 O
ATOM 4 OP2 U B2490 -64.176 -67.221 0.276 1.00 28.59 O
ATOM 5 O5' U B2490 -62.457 -68.557 -0.925 1.00 8.65 O
ATOM 6 C5' U B2490 -61.979 -69.259 -2.079 1.00 8.65 C
ATOM 7 C4' U B2490 -61.632 -70.699 -1.732 1.00 8.65 C
ATOM 8 O4' U B2490 -60.473 -70.753 -0.856 1.00 8.65 O
ATOM 9 C3' U B2490 -62.717 -71.552 -1.068 1.00 8.65 C
ATOM 10 O3' U B2490 -62.632 -72.875 -1.589 1.00 8.65 O
ATOM 11 C2' U B2490 -62.271 -71.598 0.393 1.00 8.65 C
ATOM 12 O2' U B2490 -62.679 -72.776 1.059 1.00 8.65 O
ATOM 13 C1' U B2490 -60.755 -71.593 0.238 1.00 8.65 C
ATOM 14 N1 U B2490 -60.000 -71.132 1.405 1.00 23.32 N
ATOM 15 C2 U B2490 -59.338 -72.088 2.142 1.00 23.32 C
ATOM 16 O2 U B2490 -59.382 -73.276 1.884 1.00 23.32 O
ATOM 17 N3 U B2490 -58.619 -71.606 3.200 1.00 23.32 N
ATOM 18 C4 U B2490 -58.504 -70.305 3.595 1.00 23.32 C
ATOM 19 O4 U B2490 -57.864 -70.039 4.608 1.00 23.32 O
ATOM 20 C5 U B2490 -59.225 -69.377 2.787 1.00 23.32 C
ATOM 21 C6 U B2490 -59.936 -69.814 1.747 1.00 23.32 C
ATOM 22 P A B2491 -63.408 -73.255 -2.938 1.00 10.42 P
ATOM 23 OP1 A B2491 -62.726 -74.479 -3.411 1.00 15.27 O
ATOM 24 OP2 A B2491 -63.491 -72.061 -3.824 1.00 15.27 O
ATOM 25 O5' A B2491 -64.878 -73.626 -2.469 1.00 1.79 O
TER
ATOM 2 P A A1929 -52.684 -80.962 9.487 1.00 16.98 P
ATOM 3 OP1 A A1929 -52.948 -80.928 10.948 1.00 45.62 O
ATOM 4 OP2 A A1929 -53.015 -82.192 8.714 1.00 45.62 O
ATOM 5 O5' A A1929 -53.452 -79.748 8.809 1.00 0.79 O
ATOM 6 C5' A A1929 -54.700 -79.282 9.317 1.00 0.79 C
ATOM 7 C4' A A1929 -54.621 -77.799 9.583 1.00 0.79 C
ATOM 8 O4' A A1929 -54.065 -77.117 8.426 1.00 0.79 O
ATOM 9 C3' A A1929 -55.966 -77.148 9.847 1.00 0.79 C
ATOM 10 O3' A A1929 -56.285 -77.266 11.230 1.00 0.79 O
ATOM 11 C2' A A1929 -55.734 -75.713 9.377 1.00 0.79 C
ATOM 12 O2' A A1929 -55.109 -74.883 10.338 1.00 0.79 O
ATOM 13 C1' A A1929 -54.767 -75.912 8.200 1.00 0.79 C
ATOM 14 N9 A A1929 -55.446 -76.017 6.902 1.00 14.90 N
ATOM 15 C8 A A1929 -55.358 -77.016 5.963 1.00 14.90 C
ATOM 16 N7 A A1929 -56.128 -76.831 4.919 1.00 14.90 N
ATOM 17 C5 A A1929 -56.760 -75.629 5.187 1.00 14.90 C
ATOM 18 C6 A A1929 -57.705 -74.892 4.482 1.00 14.90 C
ATOM 19 N6 A A1929 -58.207 -75.256 3.319 1.00 14.90 N
ATOM 20 N1 A A1929 -58.131 -73.741 5.021 1.00 14.90 N
ATOM 21 C2 A A1929 -57.629 -73.360 6.193 1.00 14.90 C
ATOM 22 N3 A A1929 -56.737 -73.965 6.957 1.00 14.90 N
ATOM 23 C4 A A1929 -56.340 -75.112 6.393 1.00 14.90 C
ATOM 24 P A A1930 -57.818 -77.346 11.695 1.00 10.66 P
ATOM 25 OP1 A A1930 -57.881 -77.120 13.164 1.00 29.32 O
ATOM 26 OP2 A A1930 -58.430 -78.571 11.126 1.00 29.32 O
ATOM 27 O5' A A1930 -58.462 -76.063 11.015 1.00 12.14 O
TER
ATOM 1 O3' C B2489 -62.682 -66.065 -1.353 1.00 18.58 O
ATOM 2 P U B2490 -63.536 -67.395 -1.057 1.00 20.16 P
ATOM 3 OP1 U B2490 -64.391 -67.666 -2.242 1.00 28.59 O
ATOM 4 OP2 U B2490 -64.176 -67.221 0.276 1.00 28.59 O
ATOM 5 O5' U B2490 -62.457 -68.557 -0.925 1.00 8.65 O
ATOM 6 C5' U B2490 -61.979 -69.259 -2.079 1.00 8.65 C
ATOM 7 C4' U B2490 -61.632 -70.699 -1.732 1.00 8.65 C
ATOM 8 O4' U B2490 -60.473 -70.753 -0.856 1.00 8.65 O
ATOM 9 C3' U B2490 -62.717 -71.552 -1.068 1.00 8.65 C
ATOM 10 O3' U B2490 -62.632 -72.875 -1.589 1.00 8.65 O
ATOM 11 C2' U B2490 -62.271 -71.598 0.393 1.00 8.65 C
ATOM 12 O2' U B2490 -62.679 -72.776 1.059 1.00 8.65 O
ATOM 13 C1' U B2490 -60.755 -71.593 0.238 1.00 8.65 C
ATOM 14 N1 U B2490 -60.000 -71.132 1.405 1.00 23.32 N
ATOM 15 C2 U B2490 -59.338 -72.088 2.142 1.00 23.32 C
ATOM 16 O2 U B2490 -59.382 -73.276 1.884 1.00 23.32 O
ATOM 17 N3 U B2490 -58.619 -71.606 3.200 1.00 23.32 N
ATOM 18 C4 U B2490 -58.504 -70.305 3.595 1.00 23.32 C
ATOM 19 O4 U B2490 -57.864 -70.039 4.608 1.00 23.32 O
ATOM 20 C5 U B2490 -59.225 -69.377 2.787 1.00 23.32 C
ATOM 21 C6 U B2490 -59.936 -69.814 1.747 1.00 23.32 C
ATOM 22 P A B2491 -63.408 -73.255 -2.938 1.00 10.42 P
ATOM 23 OP1 A B2491 -62.726 -74.479 -3.411 1.00 15.27 O
ATOM 24 OP2 A B2491 -63.491 -72.061 -3.824 1.00 15.27 O
ATOM 25 O5' A B2491 -64.878 -73.626 -2.469 1.00 1.79 O
TER
Atoms:
OP1: (-52.948,-80.928,10.948)
OP2: (-53.015,-82.192,8.714)
C3': (-55.966,-77.148,9.847)
C1': (-54.767,-75.912,8.200)
C5': (-54.700,-79.282,9.317)
O4': (-54.065,-77.117,8.426)
C8: (-55.358,-77.016,5.963)
O2': (-55.109,-74.883,10.338)
C6: (-57.705,-74.892,4.482)
C5: (-56.760,-75.629,5.187)
C4: (-56.340,-75.112,6.393)
P: (-52.684,-80.962,9.487)
C4': (-54.621,-77.799,9.583)
C2': (-55.734,-75.713,9.377)
C2: (-57.629,-73.360,6.193)
N1: (-58.131,-73.741,5.021)
N3: (-56.737,-73.965,6.957)
N6: (-58.207,-75.256,3.319)
N7: (-56.128,-76.831,4.919)
N9: (-55.446,-76.017,6.902)
O5': (-53.452,-79.748,8.809)
O3': (-56.285,-77.266,11.230)
OP2: (-53.015,-82.192,8.714)
C3': (-55.966,-77.148,9.847)
C1': (-54.767,-75.912,8.200)
C5': (-54.700,-79.282,9.317)
O4': (-54.065,-77.117,8.426)
C8: (-55.358,-77.016,5.963)
O2': (-55.109,-74.883,10.338)
C6: (-57.705,-74.892,4.482)
C5: (-56.760,-75.629,5.187)
C4: (-56.340,-75.112,6.393)
P: (-52.684,-80.962,9.487)
C4': (-54.621,-77.799,9.583)
C2': (-55.734,-75.713,9.377)
C2: (-57.629,-73.360,6.193)
N1: (-58.131,-73.741,5.021)
N3: (-56.737,-73.965,6.957)
N6: (-58.207,-75.256,3.319)
N7: (-56.128,-76.831,4.919)
N9: (-55.446,-76.017,6.902)
O5': (-53.452,-79.748,8.809)
O3': (-56.285,-77.266,11.230)
C4: (-58.504,-70.305,3.595)
N3: (-58.619,-71.606,3.200)
OP1: (-64.391,-67.666,-2.242)
OP2: (-64.176,-67.221,0.276)
C2: (-59.338,-72.088,2.142)
C1': (-60.755,-71.593,0.238)
C3': (-62.717,-71.552,-1.068)
O5': (-62.457,-68.557,-0.925)
O4': (-60.473,-70.753,-0.856)
C5': (-61.979,-69.259,-2.079)
P: (-63.536,-67.395,-1.057)
C4': (-61.632,-70.699,-1.732)
C2': (-62.271,-71.598,0.393)
O2': (-62.679,-72.776,1.059)
N1: (-60.000,-71.132,1.405)
O4: (-57.864,-70.039,4.608)
O2: (-59.382,-73.276,1.884)
C6: (-59.936,-69.814,1.747)
C5: (-59.225,-69.377,2.787)
O3': (-62.632,-72.875,-1.589)
N3: (-58.619,-71.606,3.200)
OP1: (-64.391,-67.666,-2.242)
OP2: (-64.176,-67.221,0.276)
C2: (-59.338,-72.088,2.142)
C1': (-60.755,-71.593,0.238)
C3': (-62.717,-71.552,-1.068)
O5': (-62.457,-68.557,-0.925)
O4': (-60.473,-70.753,-0.856)
C5': (-61.979,-69.259,-2.079)
P: (-63.536,-67.395,-1.057)
C4': (-61.632,-70.699,-1.732)
C2': (-62.271,-71.598,0.393)
O2': (-62.679,-72.776,1.059)
N1: (-60.000,-71.132,1.405)
O4: (-57.864,-70.039,4.608)
O2: (-59.382,-73.276,1.884)
C6: (-59.936,-69.814,1.747)
C5: (-59.225,-69.377,2.787)
O3': (-62.632,-72.875,-1.589)
Image (generated by PyMOL):