Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02000:02489
Extra
PDB:
ATOM 1 O3' G A1999 47.322 152.656 83.732 1.00 25.86 O
ATOM 2 P A A2000 46.243 151.488 83.901 1.00 20.93 P
ATOM 3 OP1 A A2000 46.221 150.743 82.610 1.00 21.98 O
ATOM 4 OP2 A A2000 45.001 152.065 84.432 1.00 23.68 O
ATOM 5 O5' A A2000 46.868 150.591 85.055 1.00 22.66 O
ATOM 6 C5' A A2000 47.255 149.223 84.828 1.00 20.51 C
ATOM 7 C4' A A2000 48.703 149.136 84.381 1.00 19.64 C
ATOM 8 O4' A A2000 49.563 150.048 85.120 1.00 21.04 O
ATOM 9 C3' A A2000 49.304 147.758 84.577 1.00 21.65 C
ATOM 10 O3' A A2000 49.028 146.903 83.469 1.00 23.01 O
ATOM 11 C2' A A2000 50.781 148.053 84.802 1.00 21.31 C
ATOM 12 O2' A A2000 51.485 148.276 83.602 1.00 24.25 O
ATOM 13 C1' A A2000 50.701 149.352 85.608 1.00 20.26 C
ATOM 14 N9 A A2000 50.521 149.142 87.050 1.00 20.72 N
ATOM 15 C8 A A2000 49.508 149.631 87.834 1.00 20.38 C
ATOM 16 N7 A A2000 49.598 149.282 89.094 1.00 22.69 N
ATOM 17 C5 A A2000 50.746 148.513 89.147 1.00 22.31 C
ATOM 18 C6 A A2000 51.388 147.842 90.204 1.00 25.37 C
ATOM 19 N6 A A2000 50.936 147.830 91.465 1.00 26.91 N
ATOM 20 N1 A A2000 52.522 147.167 89.920 1.00 24.70 N
ATOM 21 C2 A A2000 52.962 147.164 88.667 1.00 21.69 C
ATOM 22 N3 A A2000 52.443 147.748 87.588 1.00 22.81 N
ATOM 23 C4 A A2000 51.326 148.417 87.897 1.00 21.42 C
ATOM 24 P A A2001 48.414 145.442 83.728 1.00 24.02 P
ATOM 25 OP1 A A2001 48.191 144.841 82.386 1.00 27.57 O
ATOM 26 OP2 A A2001 47.284 145.537 84.687 1.00 21.42 O
ATOM 27 O5' A A2001 49.599 144.637 84.423 1.00 23.41 O
TER
ATOM 1 O3' C B2488 58.648 142.604 95.524 1.00 26.11 O
ATOM 2 P U B2489 58.701 143.571 96.798 1.00 25.96 P
ATOM 3 OP1 U B2489 59.566 144.731 96.439 1.00 28.31 O
ATOM 4 OP2 U B2489 59.018 142.753 97.992 1.00 27.31 O
ATOM 5 O5' U B2489 57.218 144.117 96.918 1.00 24.02 O
ATOM 6 C5' U B2489 56.904 145.183 97.807 1.00 22.79 C
ATOM 7 C4' U B2489 55.539 145.741 97.488 1.00 24.55 C
ATOM 8 O4' U B2489 55.577 146.450 96.215 1.00 26.21 O
ATOM 9 C3' U B2489 54.407 144.724 97.371 1.00 23.94 C
ATOM 10 O3' U B2489 53.233 145.347 97.869 1.00 27.99 O
ATOM 11 C2' U B2489 54.310 144.523 95.859 1.00 24.84 C
ATOM 12 O2' U B2489 53.057 144.077 95.402 1.00 25.15 O
ATOM 13 C1' U B2489 54.567 145.943 95.366 1.00 25.57 C
ATOM 14 N1 U B2489 55.010 146.064 93.970 1.00 26.79 N
ATOM 15 C2 U B2489 54.073 146.455 93.031 1.00 28.59 C
ATOM 16 O2 U B2489 52.906 146.669 93.307 1.00 30.24 O
ATOM 17 N3 U B2489 54.555 146.594 91.753 1.00 29.35 N
ATOM 18 C4 U B2489 55.853 146.394 91.327 1.00 31.09 C
ATOM 19 O4 U B2489 56.157 146.664 90.162 1.00 31.68 O
ATOM 20 C5 U B2489 56.757 145.969 92.351 1.00 29.43 C
ATOM 21 C6 U B2489 56.315 145.817 93.605 1.00 29.49 C
ATOM 22 P A B2490 52.338 144.603 98.973 1.00 28.12 P
ATOM 23 OP1 A B2490 51.368 145.584 99.505 1.00 29.40 O
ATOM 24 OP2 A B2490 53.232 143.891 99.901 1.00 29.61 O
ATOM 25 O5' A B2490 51.476 143.594 98.094 1.00 33.93 O
TER
ATOM 2 P A A2000 46.243 151.488 83.901 1.00 20.93 P
ATOM 3 OP1 A A2000 46.221 150.743 82.610 1.00 21.98 O
ATOM 4 OP2 A A2000 45.001 152.065 84.432 1.00 23.68 O
ATOM 5 O5' A A2000 46.868 150.591 85.055 1.00 22.66 O
ATOM 6 C5' A A2000 47.255 149.223 84.828 1.00 20.51 C
ATOM 7 C4' A A2000 48.703 149.136 84.381 1.00 19.64 C
ATOM 8 O4' A A2000 49.563 150.048 85.120 1.00 21.04 O
ATOM 9 C3' A A2000 49.304 147.758 84.577 1.00 21.65 C
ATOM 10 O3' A A2000 49.028 146.903 83.469 1.00 23.01 O
ATOM 11 C2' A A2000 50.781 148.053 84.802 1.00 21.31 C
ATOM 12 O2' A A2000 51.485 148.276 83.602 1.00 24.25 O
ATOM 13 C1' A A2000 50.701 149.352 85.608 1.00 20.26 C
ATOM 14 N9 A A2000 50.521 149.142 87.050 1.00 20.72 N
ATOM 15 C8 A A2000 49.508 149.631 87.834 1.00 20.38 C
ATOM 16 N7 A A2000 49.598 149.282 89.094 1.00 22.69 N
ATOM 17 C5 A A2000 50.746 148.513 89.147 1.00 22.31 C
ATOM 18 C6 A A2000 51.388 147.842 90.204 1.00 25.37 C
ATOM 19 N6 A A2000 50.936 147.830 91.465 1.00 26.91 N
ATOM 20 N1 A A2000 52.522 147.167 89.920 1.00 24.70 N
ATOM 21 C2 A A2000 52.962 147.164 88.667 1.00 21.69 C
ATOM 22 N3 A A2000 52.443 147.748 87.588 1.00 22.81 N
ATOM 23 C4 A A2000 51.326 148.417 87.897 1.00 21.42 C
ATOM 24 P A A2001 48.414 145.442 83.728 1.00 24.02 P
ATOM 25 OP1 A A2001 48.191 144.841 82.386 1.00 27.57 O
ATOM 26 OP2 A A2001 47.284 145.537 84.687 1.00 21.42 O
ATOM 27 O5' A A2001 49.599 144.637 84.423 1.00 23.41 O
TER
ATOM 1 O3' C B2488 58.648 142.604 95.524 1.00 26.11 O
ATOM 2 P U B2489 58.701 143.571 96.798 1.00 25.96 P
ATOM 3 OP1 U B2489 59.566 144.731 96.439 1.00 28.31 O
ATOM 4 OP2 U B2489 59.018 142.753 97.992 1.00 27.31 O
ATOM 5 O5' U B2489 57.218 144.117 96.918 1.00 24.02 O
ATOM 6 C5' U B2489 56.904 145.183 97.807 1.00 22.79 C
ATOM 7 C4' U B2489 55.539 145.741 97.488 1.00 24.55 C
ATOM 8 O4' U B2489 55.577 146.450 96.215 1.00 26.21 O
ATOM 9 C3' U B2489 54.407 144.724 97.371 1.00 23.94 C
ATOM 10 O3' U B2489 53.233 145.347 97.869 1.00 27.99 O
ATOM 11 C2' U B2489 54.310 144.523 95.859 1.00 24.84 C
ATOM 12 O2' U B2489 53.057 144.077 95.402 1.00 25.15 O
ATOM 13 C1' U B2489 54.567 145.943 95.366 1.00 25.57 C
ATOM 14 N1 U B2489 55.010 146.064 93.970 1.00 26.79 N
ATOM 15 C2 U B2489 54.073 146.455 93.031 1.00 28.59 C
ATOM 16 O2 U B2489 52.906 146.669 93.307 1.00 30.24 O
ATOM 17 N3 U B2489 54.555 146.594 91.753 1.00 29.35 N
ATOM 18 C4 U B2489 55.853 146.394 91.327 1.00 31.09 C
ATOM 19 O4 U B2489 56.157 146.664 90.162 1.00 31.68 O
ATOM 20 C5 U B2489 56.757 145.969 92.351 1.00 29.43 C
ATOM 21 C6 U B2489 56.315 145.817 93.605 1.00 29.49 C
ATOM 22 P A B2490 52.338 144.603 98.973 1.00 28.12 P
ATOM 23 OP1 A B2490 51.368 145.584 99.505 1.00 29.40 O
ATOM 24 OP2 A B2490 53.232 143.891 99.901 1.00 29.61 O
ATOM 25 O5' A B2490 51.476 143.594 98.094 1.00 33.93 O
TER
Atoms:
OP1: (46.221,150.743,82.610)
OP2: (45.001,152.065,84.432)
C3': (49.304,147.758,84.577)
C1': (50.701,149.352,85.608)
C5': (47.255,149.223,84.828)
O4': (49.563,150.048,85.120)
C8: (49.508,149.631,87.834)
O2': (51.485,148.276,83.602)
C6: (51.388,147.842,90.204)
C5: (50.746,148.513,89.147)
C4: (51.326,148.417,87.897)
P: (46.243,151.488,83.901)
C4': (48.703,149.136,84.381)
C2': (50.781,148.053,84.802)
C2: (52.962,147.164,88.667)
N1: (52.522,147.167,89.920)
N3: (52.443,147.748,87.588)
N6: (50.936,147.830,91.465)
N7: (49.598,149.282,89.094)
N9: (50.521,149.142,87.050)
O5': (46.868,150.591,85.055)
O3': (49.028,146.903,83.469)
OP2: (45.001,152.065,84.432)
C3': (49.304,147.758,84.577)
C1': (50.701,149.352,85.608)
C5': (47.255,149.223,84.828)
O4': (49.563,150.048,85.120)
C8: (49.508,149.631,87.834)
O2': (51.485,148.276,83.602)
C6: (51.388,147.842,90.204)
C5: (50.746,148.513,89.147)
C4: (51.326,148.417,87.897)
P: (46.243,151.488,83.901)
C4': (48.703,149.136,84.381)
C2': (50.781,148.053,84.802)
C2: (52.962,147.164,88.667)
N1: (52.522,147.167,89.920)
N3: (52.443,147.748,87.588)
N6: (50.936,147.830,91.465)
N7: (49.598,149.282,89.094)
N9: (50.521,149.142,87.050)
O5': (46.868,150.591,85.055)
O3': (49.028,146.903,83.469)
C4: (55.853,146.394,91.327)
N3: (54.555,146.594,91.753)
OP1: (59.566,144.731,96.439)
OP2: (59.018,142.753,97.992)
C2: (54.073,146.455,93.031)
C1': (54.567,145.943,95.366)
C3': (54.407,144.724,97.371)
O5': (57.218,144.117,96.918)
O4': (55.577,146.450,96.215)
C5': (56.904,145.183,97.807)
P: (58.701,143.571,96.798)
C4': (55.539,145.741,97.488)
C2': (54.310,144.523,95.859)
O2': (53.057,144.077,95.402)
N1: (55.010,146.064,93.970)
O4: (56.157,146.664,90.162)
O2: (52.906,146.669,93.307)
C6: (56.315,145.817,93.605)
C5: (56.757,145.969,92.351)
O3': (53.233,145.347,97.869)
N3: (54.555,146.594,91.753)
OP1: (59.566,144.731,96.439)
OP2: (59.018,142.753,97.992)
C2: (54.073,146.455,93.031)
C1': (54.567,145.943,95.366)
C3': (54.407,144.724,97.371)
O5': (57.218,144.117,96.918)
O4': (55.577,146.450,96.215)
C5': (56.904,145.183,97.807)
P: (58.701,143.571,96.798)
C4': (55.539,145.741,97.488)
C2': (54.310,144.523,95.859)
O2': (53.057,144.077,95.402)
N1: (55.010,146.064,93.970)
O4: (56.157,146.664,90.162)
O2: (52.906,146.669,93.307)
C6: (56.315,145.817,93.605)
C5: (56.757,145.969,92.351)
O3': (53.233,145.347,97.869)
Image (generated by PyMOL):