Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02000:02489
Extra
PDB:
ATOM 1 O3' G A1999 47.416 153.129 83.523 1.00 33.09 O
ATOM 2 P A A2000 46.392 151.918 83.748 1.00 29.35 P
ATOM 3 OP1 A A2000 46.383 151.196 82.454 1.00 30.48 O
ATOM 4 OP2 A A2000 45.129 152.420 84.308 1.00 27.96 O
ATOM 5 O5' A A2000 47.104 151.041 84.871 1.00 29.55 O
ATOM 6 C5' A A2000 47.464 149.662 84.638 1.00 30.42 C
ATOM 7 C4' A A2000 48.906 149.557 84.177 1.00 29.57 C
ATOM 8 O4' A A2000 49.759 150.491 84.887 1.00 29.96 O
ATOM 9 C3' A A2000 49.543 148.193 84.380 1.00 29.64 C
ATOM 10 O3' A A2000 49.315 147.336 83.279 1.00 29.53 O
ATOM 11 C2' A A2000 51.008 148.525 84.579 1.00 28.72 C
ATOM 12 O2' A A2000 51.655 148.782 83.353 1.00 30.72 O
ATOM 13 C1' A A2000 50.896 149.813 85.389 1.00 28.05 C
ATOM 14 N9 A A2000 50.682 149.587 86.818 1.00 27.62 N
ATOM 15 C8 A A2000 49.690 150.116 87.599 1.00 28.03 C
ATOM 16 N7 A A2000 49.759 149.761 88.853 1.00 29.01 N
ATOM 17 C5 A A2000 50.870 148.934 88.904 1.00 28.42 C
ATOM 18 C6 A A2000 51.481 148.230 89.957 1.00 28.76 C
ATOM 19 N6 A A2000 51.047 148.246 91.218 1.00 27.71 N
ATOM 20 N1 A A2000 52.573 147.498 89.666 1.00 30.63 N
ATOM 21 C2 A A2000 53.012 147.475 88.410 1.00 29.64 C
ATOM 22 N3 A A2000 52.526 148.088 87.338 1.00 30.87 N
ATOM 23 C4 A A2000 51.443 148.813 87.657 1.00 28.65 C
ATOM 24 P A A2001 48.620 145.915 83.520 1.00 28.76 P
ATOM 25 OP1 A A2001 48.331 145.365 82.167 1.00 28.36 O
ATOM 26 OP2 A A2001 47.510 146.099 84.494 1.00 25.17 O
ATOM 27 O5' A A2001 49.767 145.058 84.213 1.00 26.25 O
TER
ATOM 1 O3' C B2488 58.939 142.900 95.254 1.00 26.95 O
ATOM 2 P U B2489 58.969 143.843 96.549 1.00 27.39 P
ATOM 3 OP1 U B2489 59.919 144.944 96.253 1.00 29.18 O
ATOM 4 OP2 U B2489 59.165 143.010 97.771 1.00 27.08 O
ATOM 5 O5' U B2489 57.515 144.474 96.575 1.00 24.50 O
ATOM 6 C5' U B2489 57.209 145.549 97.447 1.00 24.57 C
ATOM 7 C4' U B2489 55.834 146.091 97.147 1.00 28.26 C
ATOM 8 O4' U B2489 55.843 146.820 95.887 1.00 30.24 O
ATOM 9 C3' U B2489 54.693 145.085 97.050 1.00 26.54 C
ATOM 10 O3' U B2489 53.548 145.727 97.577 1.00 29.95 O
ATOM 11 C2' U B2489 54.532 144.917 95.543 1.00 27.12 C
ATOM 12 O2' U B2489 53.237 144.519 95.160 1.00 24.54 O
ATOM 13 C1' U B2489 54.798 146.343 95.069 1.00 29.24 C
ATOM 14 N1 U B2489 55.194 146.488 93.662 1.00 31.90 N
ATOM 15 C2 U B2489 54.198 146.793 92.756 1.00 32.99 C
ATOM 16 O2 U B2489 53.033 146.912 93.071 1.00 34.53 O
ATOM 17 N3 U B2489 54.617 146.952 91.462 1.00 34.40 N
ATOM 18 C4 U B2489 55.901 146.840 90.984 1.00 36.53 C
ATOM 19 O4 U B2489 56.116 147.020 89.779 1.00 38.97 O
ATOM 20 C5 U B2489 56.881 146.509 91.979 1.00 35.92 C
ATOM 21 C6 U B2489 56.501 146.344 93.254 1.00 33.20 C
ATOM 22 P A B2490 52.705 145.033 98.747 1.00 32.87 P
ATOM 23 OP1 A B2490 51.885 146.090 99.368 1.00 34.52 O
ATOM 24 OP2 A B2490 53.616 144.232 99.590 1.00 35.52 O
ATOM 25 O5' A B2490 51.687 144.093 97.965 1.00 33.86 O
TER
ATOM 2 P A A2000 46.392 151.918 83.748 1.00 29.35 P
ATOM 3 OP1 A A2000 46.383 151.196 82.454 1.00 30.48 O
ATOM 4 OP2 A A2000 45.129 152.420 84.308 1.00 27.96 O
ATOM 5 O5' A A2000 47.104 151.041 84.871 1.00 29.55 O
ATOM 6 C5' A A2000 47.464 149.662 84.638 1.00 30.42 C
ATOM 7 C4' A A2000 48.906 149.557 84.177 1.00 29.57 C
ATOM 8 O4' A A2000 49.759 150.491 84.887 1.00 29.96 O
ATOM 9 C3' A A2000 49.543 148.193 84.380 1.00 29.64 C
ATOM 10 O3' A A2000 49.315 147.336 83.279 1.00 29.53 O
ATOM 11 C2' A A2000 51.008 148.525 84.579 1.00 28.72 C
ATOM 12 O2' A A2000 51.655 148.782 83.353 1.00 30.72 O
ATOM 13 C1' A A2000 50.896 149.813 85.389 1.00 28.05 C
ATOM 14 N9 A A2000 50.682 149.587 86.818 1.00 27.62 N
ATOM 15 C8 A A2000 49.690 150.116 87.599 1.00 28.03 C
ATOM 16 N7 A A2000 49.759 149.761 88.853 1.00 29.01 N
ATOM 17 C5 A A2000 50.870 148.934 88.904 1.00 28.42 C
ATOM 18 C6 A A2000 51.481 148.230 89.957 1.00 28.76 C
ATOM 19 N6 A A2000 51.047 148.246 91.218 1.00 27.71 N
ATOM 20 N1 A A2000 52.573 147.498 89.666 1.00 30.63 N
ATOM 21 C2 A A2000 53.012 147.475 88.410 1.00 29.64 C
ATOM 22 N3 A A2000 52.526 148.088 87.338 1.00 30.87 N
ATOM 23 C4 A A2000 51.443 148.813 87.657 1.00 28.65 C
ATOM 24 P A A2001 48.620 145.915 83.520 1.00 28.76 P
ATOM 25 OP1 A A2001 48.331 145.365 82.167 1.00 28.36 O
ATOM 26 OP2 A A2001 47.510 146.099 84.494 1.00 25.17 O
ATOM 27 O5' A A2001 49.767 145.058 84.213 1.00 26.25 O
TER
ATOM 1 O3' C B2488 58.939 142.900 95.254 1.00 26.95 O
ATOM 2 P U B2489 58.969 143.843 96.549 1.00 27.39 P
ATOM 3 OP1 U B2489 59.919 144.944 96.253 1.00 29.18 O
ATOM 4 OP2 U B2489 59.165 143.010 97.771 1.00 27.08 O
ATOM 5 O5' U B2489 57.515 144.474 96.575 1.00 24.50 O
ATOM 6 C5' U B2489 57.209 145.549 97.447 1.00 24.57 C
ATOM 7 C4' U B2489 55.834 146.091 97.147 1.00 28.26 C
ATOM 8 O4' U B2489 55.843 146.820 95.887 1.00 30.24 O
ATOM 9 C3' U B2489 54.693 145.085 97.050 1.00 26.54 C
ATOM 10 O3' U B2489 53.548 145.727 97.577 1.00 29.95 O
ATOM 11 C2' U B2489 54.532 144.917 95.543 1.00 27.12 C
ATOM 12 O2' U B2489 53.237 144.519 95.160 1.00 24.54 O
ATOM 13 C1' U B2489 54.798 146.343 95.069 1.00 29.24 C
ATOM 14 N1 U B2489 55.194 146.488 93.662 1.00 31.90 N
ATOM 15 C2 U B2489 54.198 146.793 92.756 1.00 32.99 C
ATOM 16 O2 U B2489 53.033 146.912 93.071 1.00 34.53 O
ATOM 17 N3 U B2489 54.617 146.952 91.462 1.00 34.40 N
ATOM 18 C4 U B2489 55.901 146.840 90.984 1.00 36.53 C
ATOM 19 O4 U B2489 56.116 147.020 89.779 1.00 38.97 O
ATOM 20 C5 U B2489 56.881 146.509 91.979 1.00 35.92 C
ATOM 21 C6 U B2489 56.501 146.344 93.254 1.00 33.20 C
ATOM 22 P A B2490 52.705 145.033 98.747 1.00 32.87 P
ATOM 23 OP1 A B2490 51.885 146.090 99.368 1.00 34.52 O
ATOM 24 OP2 A B2490 53.616 144.232 99.590 1.00 35.52 O
ATOM 25 O5' A B2490 51.687 144.093 97.965 1.00 33.86 O
TER
Atoms:
OP1: (46.383,151.196,82.454)
OP2: (45.129,152.420,84.308)
C3': (49.543,148.193,84.380)
C1': (50.896,149.813,85.389)
C5': (47.464,149.662,84.638)
O4': (49.759,150.491,84.887)
C8: (49.690,150.116,87.599)
O2': (51.655,148.782,83.353)
C6: (51.481,148.230,89.957)
C5: (50.870,148.934,88.904)
C4: (51.443,148.813,87.657)
P: (46.392,151.918,83.748)
C4': (48.906,149.557,84.177)
C2': (51.008,148.525,84.579)
C2: (53.012,147.475,88.410)
N1: (52.573,147.498,89.666)
N3: (52.526,148.088,87.338)
N6: (51.047,148.246,91.218)
N7: (49.759,149.761,88.853)
N9: (50.682,149.587,86.818)
O5': (47.104,151.041,84.871)
O3': (49.315,147.336,83.279)
OP2: (45.129,152.420,84.308)
C3': (49.543,148.193,84.380)
C1': (50.896,149.813,85.389)
C5': (47.464,149.662,84.638)
O4': (49.759,150.491,84.887)
C8: (49.690,150.116,87.599)
O2': (51.655,148.782,83.353)
C6: (51.481,148.230,89.957)
C5: (50.870,148.934,88.904)
C4: (51.443,148.813,87.657)
P: (46.392,151.918,83.748)
C4': (48.906,149.557,84.177)
C2': (51.008,148.525,84.579)
C2: (53.012,147.475,88.410)
N1: (52.573,147.498,89.666)
N3: (52.526,148.088,87.338)
N6: (51.047,148.246,91.218)
N7: (49.759,149.761,88.853)
N9: (50.682,149.587,86.818)
O5': (47.104,151.041,84.871)
O3': (49.315,147.336,83.279)
C4: (55.901,146.840,90.984)
N3: (54.617,146.952,91.462)
OP1: (59.919,144.944,96.253)
OP2: (59.165,143.010,97.771)
C2: (54.198,146.793,92.756)
C1': (54.798,146.343,95.069)
C3': (54.693,145.085,97.050)
O5': (57.515,144.474,96.575)
O4': (55.843,146.820,95.887)
C5': (57.209,145.549,97.447)
P: (58.969,143.843,96.549)
C4': (55.834,146.091,97.147)
C2': (54.532,144.917,95.543)
O2': (53.237,144.519,95.160)
N1: (55.194,146.488,93.662)
O4: (56.116,147.020,89.779)
O2: (53.033,146.912,93.071)
C6: (56.501,146.344,93.254)
C5: (56.881,146.509,91.979)
O3': (53.548,145.727,97.577)
N3: (54.617,146.952,91.462)
OP1: (59.919,144.944,96.253)
OP2: (59.165,143.010,97.771)
C2: (54.198,146.793,92.756)
C1': (54.798,146.343,95.069)
C3': (54.693,145.085,97.050)
O5': (57.515,144.474,96.575)
O4': (55.843,146.820,95.887)
C5': (57.209,145.549,97.447)
P: (58.969,143.843,96.549)
C4': (55.834,146.091,97.147)
C2': (54.532,144.917,95.543)
O2': (53.237,144.519,95.160)
N1: (55.194,146.488,93.662)
O4: (56.116,147.020,89.779)
O2: (53.033,146.912,93.071)
C6: (56.501,146.344,93.254)
C5: (56.881,146.509,91.979)
O3': (53.548,145.727,97.577)
Image (generated by PyMOL):