ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OGE:A541:A856

Extra

PDB:
ATOM 1 O3' C A 540 67.530 30.089 38.120 1.00 70.91 O
ATOM 2 P A A 541 67.192 31.192 39.241 1.00 76.94 P
ATOM 3 OP1 A A 541 68.074 30.905 40.404 1.00 72.76 O
ATOM 4 OP2 A A 541 65.718 31.197 39.443 1.00 53.35 O
ATOM 5 O5' A A 541 67.644 32.545 38.532 1.00 66.91 O
ATOM 6 C5' A A 541 67.568 33.785 39.206 1.00 67.35 C
ATOM 7 C4' A A 541 67.517 34.929 38.231 1.00 66.60 C
ATOM 8 O4' A A 541 68.812 35.146 37.646 1.00 62.47 O
ATOM 9 C3' A A 541 66.575 34.753 37.050 1.00 58.84 C
ATOM 10 O3' A A 541 65.277 35.208 37.366 1.00 67.10 O
ATOM 11 C2' A A 541 67.238 35.538 35.901 1.00 57.05 C
ATOM 12 O2' A A 541 66.581 36.779 35.681 1.00 55.77 O
ATOM 13 C1' A A 541 68.660 35.806 36.426 1.00 55.14 C
ATOM 14 N9 A A 541 69.720 35.361 35.517 1.00 50.86 N
ATOM 15 C8 A A 541 70.946 35.951 35.514 1.00 62.83 C
ATOM 16 N7 A A 541 71.790 35.435 34.665 1.00 69.02 N
ATOM 17 C5 A A 541 71.060 34.424 34.084 1.00 59.11 C
ATOM 18 C6 A A 541 71.427 33.525 33.099 1.00 59.94 C
ATOM 19 N6 A A 541 72.648 33.537 32.547 1.00 70.35 N
ATOM 20 N1 A A 541 70.493 32.638 32.710 1.00 58.89 N
ATOM 21 C2 A A 541 69.295 32.674 33.293 1.00 64.70 C
ATOM 22 N3 A A 541 68.838 33.485 34.235 1.00 68.68 N
ATOM 23 C4 A A 541 69.786 34.348 34.598 1.00 59.96 C
ATOM 24 P C A 542 64.040 34.946 36.383 1.00 66.83 P
ATOM 25 OP1 C A 542 64.076 33.519 36.022 1.00 76.34 O
ATOM 26 OP2 C A 542 64.110 35.968 35.303 1.00 58.55 O
ATOM 27 O5' C A 542 62.790 35.229 37.326 1.00 62.38 O
TER

ATOM 1 O3' C B 855 72.938 26.675 24.661 1.00 51.05 O
ATOM 2 P U B 856 73.224 25.513 25.737 1.00 62.83 P
ATOM 3 OP1 U B 856 74.361 24.712 25.217 1.00 49.20 O
ATOM 4 OP2 U B 856 71.940 24.837 26.022 1.00 52.52 O
ATOM 5 O5' U B 856 73.680 26.330 27.006 1.00 67.40 O
ATOM 6 C5' U B 856 74.779 27.224 26.929 1.00 65.36 C
ATOM 7 C4' U B 856 75.173 27.718 28.288 1.00 52.59 C
ATOM 8 O4' U B 856 74.190 28.681 28.738 1.00 48.81 O
ATOM 9 C3' U B 856 75.254 26.638 29.356 1.00 46.15 C
ATOM 10 O3' U B 856 76.438 26.803 30.120 1.00 54.98 O
ATOM 11 C2' U B 856 74.023 26.881 30.227 1.00 46.90 C
ATOM 12 O2' U B 856 74.204 26.556 31.588 1.00 48.51 O
ATOM 13 C1' U B 856 73.774 28.373 30.040 1.00 54.47 C
ATOM 14 N1 U B 856 72.344 28.769 30.185 1.00 60.78 N
ATOM 15 C2 U B 856 72.049 29.879 30.979 1.00 61.78 C
ATOM 16 O2 U B 856 72.934 30.545 31.521 1.00 68.08 O
ATOM 17 N3 U B 856 70.701 30.187 31.112 1.00 56.20 N
ATOM 18 C4 U B 856 69.632 29.513 30.550 1.00 61.63 C
ATOM 19 O4 U B 856 68.471 29.896 30.757 1.00 62.97 O
ATOM 20 C5 U B 856 70.023 28.384 29.749 1.00 59.52 C
ATOM 21 C6 U B 856 71.320 28.053 29.599 1.00 59.46 C
ATOM 22 P G B 857 77.448 25.570 30.273 1.00 68.31 P
ATOM 23 OP1 G B 857 76.682 24.346 29.943 1.00 64.69 O
ATOM 24 OP2 G B 857 78.075 25.682 31.611 1.00 71.78 O
ATOM 25 O5' G B 857 78.525 25.848 29.145 1.00 47.03 O
TER

Atoms:
OP1: (68.074,30.905,40.404)
OP2: (65.718,31.197,39.443)
C3': (66.575,34.753,37.050)
C1': (68.660,35.806,36.426)
C5': (67.568,33.785,39.206)
O4': (68.812,35.146,37.646)
C8: (70.946,35.951,35.514)
O2': (66.581,36.779,35.681)
C6: (71.427,33.525,33.099)
C5: (71.060,34.424,34.084)
C4: (69.786,34.348,34.598)
P: (67.192,31.192,39.241)
C4': (67.517,34.929,38.231)
C2': (67.238,35.538,35.901)
C2: (69.295,32.674,33.293)
N1: (70.493,32.638,32.710)
N3: (68.838,33.485,34.235)
N6: (72.648,33.537,32.547)
N7: (71.790,35.435,34.665)
N9: (69.720,35.361,35.517)
O5': (67.644,32.545,38.532)
O3': (65.277,35.208,37.366)
C4: (69.632,29.513,30.550)
N3: (70.701,30.187,31.112)
OP1: (74.361,24.712,25.217)
OP2: (71.940,24.837,26.022)
C2: (72.049,29.879,30.979)
C1': (73.774,28.373,30.040)
C3': (75.254,26.638,29.356)
O5': (73.680,26.330,27.006)
O4': (74.190,28.681,28.738)
C5': (74.779,27.224,26.929)
P: (73.224,25.513,25.737)
C4': (75.173,27.718,28.288)
C2': (74.023,26.881,30.227)
O2': (74.204,26.556,31.588)
N1: (72.344,28.769,30.185)
O4: (68.471,29.896,30.757)
O2: (72.934,30.545,31.521)
C6: (71.320,28.053,29.599)
C5: (70.023,28.384,29.749)
O3': (76.438,26.803,30.120)
Image (generated by PyMOL):
PyMOL image
show in jmol