ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3TRA:A14:A46

Extra

PDB:
ATOM 1 O3' A A 13 16.305 19.604 1.301 1.00 10.10 O
ATOM 2 P A A 14 17.360 19.394 2.526 1.00 18.38 P
ATOM 3 OP1 A A 14 18.597 20.210 2.317 1.00 6.76 O
ATOM 4 OP2 A A 14 17.644 17.932 2.467 1.00 14.01 O
ATOM 5 O5' A A 14 16.504 19.815 3.797 1.00 14.44 O
ATOM 6 C5' A A 14 16.142 21.209 3.977 1.00 14.14 C
ATOM 7 C4' A A 14 14.749 21.223 4.560 1.00 9.88 C
ATOM 8 O4' A A 14 13.923 20.291 3.887 1.00 5.24 O
ATOM 9 C3' A A 14 14.659 20.808 6.025 1.00 16.34 C
ATOM 10 O3' A A 14 14.979 21.855 6.937 1.00 19.79 O
ATOM 11 C2' A A 14 13.206 20.352 6.159 1.00 19.58 C
ATOM 12 O2' A A 14 12.422 21.529 6.339 1.00 17.84 O
ATOM 13 C1' A A 14 12.970 19.727 4.799 1.00 13.96 C
ATOM 14 N9 A A 14 13.133 18.258 4.844 1.00 15.17 N
ATOM 15 C8 A A 14 14.237 17.517 4.515 1.00 15.42 C
ATOM 16 N7 A A 14 14.062 16.225 4.649 1.00 14.43 N
ATOM 17 C5 A A 14 12.741 16.116 5.083 1.00 11.44 C
ATOM 18 C6 A A 14 11.951 14.980 5.397 1.00 8.49 C
ATOM 19 N6 A A 14 12.392 13.736 5.322 1.00 10.21 N
ATOM 20 N1 A A 14 10.679 15.259 5.801 1.00 3.98 N
ATOM 21 C2 A A 14 10.221 16.538 5.875 1.00 5.73 C
ATOM 22 N3 A A 14 10.902 17.639 5.591 1.00 8.20 N
ATOM 23 C4 A A 14 12.156 17.354 5.203 1.00 9.00 C
TER

ATOM 1 O3' A B 45 5.964 5.698 4.769 1.00 0.32 O
ATOM 2 P U B 46 5.246 6.140 6.144 1.00 0.00 P
ATOM 3 OP1 U B 46 4.945 4.944 6.997 1.00 2.78 O
ATOM 4 OP2 U B 46 3.980 6.766 5.666 1.00 1.35 O
ATOM 5 O5' U B 46 6.259 7.160 6.817 1.00 3.52 O
ATOM 6 C5' U B 46 7.254 6.861 7.819 1.00 0.37 C
ATOM 7 C4' U B 46 8.593 7.269 7.221 1.00 0.78 C
ATOM 8 O4' U B 46 8.454 8.575 6.668 1.00 3.54 O
ATOM 9 C3' U B 46 9.763 7.371 8.208 1.00 0.65 C
ATOM 10 O3' U B 46 11.011 6.997 7.565 1.00 0.00 O
ATOM 11 C2' U B 46 9.811 8.847 8.551 1.00 2.07 C
ATOM 12 O2' U B 46 11.095 9.180 9.000 1.00 0.89 O
ATOM 13 C1' U B 46 9.443 9.452 7.236 1.00 0.87 C
ATOM 14 N1 U B 46 8.870 10.805 7.355 1.00 0.00 N
ATOM 15 C2 U B 46 9.690 11.846 6.937 1.00 0.00 C
ATOM 16 O2 U B 46 10.824 11.614 6.518 1.00 4.97 O
ATOM 17 N3 U B 46 9.202 13.117 7.011 1.00 1.96 N
ATOM 18 C4 U B 46 7.942 13.376 7.475 1.00 4.87 C
ATOM 19 O4 U B 46 7.580 14.586 7.505 1.00 8.19 O
ATOM 20 C5 U B 46 7.115 12.301 7.894 1.00 5.07 C
ATOM 21 C6 U B 46 7.616 11.050 7.819 1.00 0.12 C
TER

Atoms:
OP1: (18.597,20.210,2.317)
OP2: (17.644,17.932,2.467)
C3': (14.659,20.808,6.025)
C1': (12.970,19.727,4.799)
C5': (16.142,21.209,3.977)
O4': (13.923,20.291,3.887)
C8: (14.237,17.517,4.515)
O2': (12.422,21.529,6.339)
C6: (11.951,14.980,5.397)
C5: (12.741,16.116,5.083)
C4: (12.156,17.354,5.203)
P: (17.360,19.394,2.526)
C4': (14.749,21.223,4.560)
C2': (13.206,20.352,6.159)
C2: (10.221,16.538,5.875)
N1: (10.679,15.259,5.801)
N3: (10.902,17.639,5.591)
N6: (12.392,13.736,5.322)
N7: (14.062,16.225,4.649)
N9: (13.133,18.258,4.844)
O5': (16.504,19.815,3.797)
O3': (14.979,21.855,6.937)
C4: (7.942,13.376,7.475)
N3: (9.202,13.117,7.011)
OP1: (4.945,4.944,6.997)
OP2: (3.980,6.766,5.666)
C2: (9.690,11.846,6.937)
C1': (9.443,9.452,7.236)
C3': (9.763,7.371,8.208)
O5': (6.259,7.160,6.817)
O4': (8.454,8.575,6.668)
C5': (7.254,6.861,7.819)
P: (5.246,6.140,6.144)
C4': (8.593,7.269,7.221)
C2': (9.811,8.847,8.551)
O2': (11.095,9.180,9.000)
N1: (8.870,10.805,7.355)
O4: (7.580,14.586,7.505)
O2: (10.824,11.614,6.518)
C6: (7.616,11.050,7.819)
C5: (7.115,12.301,7.894)
O3': (11.011,6.997,7.565)
Image (generated by PyMOL):
PyMOL image
show in jmol