Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1340:A1334
Extra
PDB:
ATOM 1 O3' C A1339 -100.738 107.707 81.727 1.00 37.29 O
ATOM 2 P A A1340 -99.739 107.511 80.493 1.00 34.38 P
ATOM 3 OP1 A A1340 -99.758 106.059 80.161 1.00 45.73 O
ATOM 4 OP2 A A1340 -98.446 108.176 80.810 1.00 46.06 O
ATOM 5 O5' A A1340 -100.428 108.323 79.310 1.00 91.19 O
ATOM 6 C5' A A1340 -100.052 109.683 79.051 1.00 92.89 C
ATOM 7 C4' A A1340 -100.362 110.051 77.623 1.00 94.37 C
ATOM 8 O4' A A1340 -99.642 109.159 76.737 1.00 95.77 O
ATOM 9 C3' A A1340 -101.830 109.979 77.223 1.00 94.79 C
ATOM 10 O3' A A1340 -102.092 111.047 76.305 1.00 92.06 O
ATOM 11 C2' A A1340 -101.931 108.621 76.526 1.00 96.08 C
ATOM 12 O2' A A1340 -102.953 108.585 75.548 1.00 96.79 O
ATOM 13 C1' A A1340 -100.546 108.489 75.885 1.00 97.05 C
ATOM 14 N9 A A1340 -100.049 107.120 75.700 1.00 73.39 N
ATOM 15 C8 A A1340 -98.895 106.588 76.229 1.00 74.21 C
ATOM 16 N7 A A1340 -98.668 105.350 75.870 1.00 75.72 N
ATOM 17 C5 A A1340 -99.749 105.035 75.059 1.00 75.53 C
ATOM 18 C6 A A1340 -100.098 103.864 74.366 1.00 75.56 C
ATOM 19 N6 A A1340 -99.361 102.749 74.380 1.00 74.27 N
ATOM 20 N1 A A1340 -101.241 103.875 73.650 1.00 76.12 N
ATOM 21 C2 A A1340 -101.974 104.992 73.637 1.00 76.01 C
ATOM 22 N3 A A1340 -101.754 106.154 74.245 1.00 75.83 N
ATOM 23 C4 A A1340 -100.612 106.112 74.950 1.00 74.65 C
ATOM 24 P U A1341 -102.418 112.530 76.860 1.00 39.71 P
ATOM 25 OP1 U A1341 -102.494 112.512 78.348 1.00 80.54 O
ATOM 26 OP2 U A1341 -103.590 112.998 76.073 1.00 82.07 O
ATOM 27 O5' U A1341 -101.163 113.415 76.414 1.00 20.71 O
TER
ATOM 1 O3' A B1333 -101.846 98.191 65.761 1.00 39.85 O
ATOM 2 P U B1334 -103.047 97.244 66.238 1.00 43.01 P
ATOM 3 OP1 U B1334 -102.839 95.922 65.594 1.00 57.69 O
ATOM 4 OP2 U B1334 -104.323 97.975 66.030 1.00 57.79 O
ATOM 5 O5' U B1334 -102.816 97.063 67.798 1.00 41.94 O
ATOM 6 C5' U B1334 -101.624 96.456 68.304 1.00 41.75 C
ATOM 7 C4' U B1334 -101.383 96.916 69.717 1.00 41.51 C
ATOM 8 O4' U B1334 -101.084 98.328 69.713 1.00 40.96 O
ATOM 9 C3' U B1334 -102.584 96.783 70.647 1.00 40.98 C
ATOM 10 O3' U B1334 -102.573 95.487 71.266 1.00 41.03 O
ATOM 11 C2' U B1334 -102.345 97.868 71.701 1.00 40.79 C
ATOM 12 O2' U B1334 -101.684 97.392 72.853 1.00 41.36 O
ATOM 13 C1' U B1334 -101.441 98.870 70.968 1.00 41.23 C
ATOM 14 N1 U B1334 -102.013 100.216 70.794 1.00 78.00 N
ATOM 15 C2 U B1334 -101.710 101.173 71.757 1.00 78.63 C
ATOM 16 O2 U B1334 -100.942 100.969 72.685 1.00 77.45 O
ATOM 17 N3 U B1334 -102.336 102.380 71.592 1.00 78.70 N
ATOM 18 C4 U B1334 -103.198 102.733 70.582 1.00 79.46 C
ATOM 19 O4 U B1334 -103.744 103.838 70.611 1.00 81.68 O
ATOM 20 C5 U B1334 -103.422 101.712 69.605 1.00 78.40 C
ATOM 21 C6 U B1334 -102.838 100.520 69.741 1.00 78.29 C
ATOM 22 P C B1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 23 OP1 C B1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 24 OP2 C B1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 25 O5' C B1335 -105.019 95.097 71.713 1.00 38.96 O
TER
ATOM 2 P A A1340 -99.739 107.511 80.493 1.00 34.38 P
ATOM 3 OP1 A A1340 -99.758 106.059 80.161 1.00 45.73 O
ATOM 4 OP2 A A1340 -98.446 108.176 80.810 1.00 46.06 O
ATOM 5 O5' A A1340 -100.428 108.323 79.310 1.00 91.19 O
ATOM 6 C5' A A1340 -100.052 109.683 79.051 1.00 92.89 C
ATOM 7 C4' A A1340 -100.362 110.051 77.623 1.00 94.37 C
ATOM 8 O4' A A1340 -99.642 109.159 76.737 1.00 95.77 O
ATOM 9 C3' A A1340 -101.830 109.979 77.223 1.00 94.79 C
ATOM 10 O3' A A1340 -102.092 111.047 76.305 1.00 92.06 O
ATOM 11 C2' A A1340 -101.931 108.621 76.526 1.00 96.08 C
ATOM 12 O2' A A1340 -102.953 108.585 75.548 1.00 96.79 O
ATOM 13 C1' A A1340 -100.546 108.489 75.885 1.00 97.05 C
ATOM 14 N9 A A1340 -100.049 107.120 75.700 1.00 73.39 N
ATOM 15 C8 A A1340 -98.895 106.588 76.229 1.00 74.21 C
ATOM 16 N7 A A1340 -98.668 105.350 75.870 1.00 75.72 N
ATOM 17 C5 A A1340 -99.749 105.035 75.059 1.00 75.53 C
ATOM 18 C6 A A1340 -100.098 103.864 74.366 1.00 75.56 C
ATOM 19 N6 A A1340 -99.361 102.749 74.380 1.00 74.27 N
ATOM 20 N1 A A1340 -101.241 103.875 73.650 1.00 76.12 N
ATOM 21 C2 A A1340 -101.974 104.992 73.637 1.00 76.01 C
ATOM 22 N3 A A1340 -101.754 106.154 74.245 1.00 75.83 N
ATOM 23 C4 A A1340 -100.612 106.112 74.950 1.00 74.65 C
ATOM 24 P U A1341 -102.418 112.530 76.860 1.00 39.71 P
ATOM 25 OP1 U A1341 -102.494 112.512 78.348 1.00 80.54 O
ATOM 26 OP2 U A1341 -103.590 112.998 76.073 1.00 82.07 O
ATOM 27 O5' U A1341 -101.163 113.415 76.414 1.00 20.71 O
TER
ATOM 1 O3' A B1333 -101.846 98.191 65.761 1.00 39.85 O
ATOM 2 P U B1334 -103.047 97.244 66.238 1.00 43.01 P
ATOM 3 OP1 U B1334 -102.839 95.922 65.594 1.00 57.69 O
ATOM 4 OP2 U B1334 -104.323 97.975 66.030 1.00 57.79 O
ATOM 5 O5' U B1334 -102.816 97.063 67.798 1.00 41.94 O
ATOM 6 C5' U B1334 -101.624 96.456 68.304 1.00 41.75 C
ATOM 7 C4' U B1334 -101.383 96.916 69.717 1.00 41.51 C
ATOM 8 O4' U B1334 -101.084 98.328 69.713 1.00 40.96 O
ATOM 9 C3' U B1334 -102.584 96.783 70.647 1.00 40.98 C
ATOM 10 O3' U B1334 -102.573 95.487 71.266 1.00 41.03 O
ATOM 11 C2' U B1334 -102.345 97.868 71.701 1.00 40.79 C
ATOM 12 O2' U B1334 -101.684 97.392 72.853 1.00 41.36 O
ATOM 13 C1' U B1334 -101.441 98.870 70.968 1.00 41.23 C
ATOM 14 N1 U B1334 -102.013 100.216 70.794 1.00 78.00 N
ATOM 15 C2 U B1334 -101.710 101.173 71.757 1.00 78.63 C
ATOM 16 O2 U B1334 -100.942 100.969 72.685 1.00 77.45 O
ATOM 17 N3 U B1334 -102.336 102.380 71.592 1.00 78.70 N
ATOM 18 C4 U B1334 -103.198 102.733 70.582 1.00 79.46 C
ATOM 19 O4 U B1334 -103.744 103.838 70.611 1.00 81.68 O
ATOM 20 C5 U B1334 -103.422 101.712 69.605 1.00 78.40 C
ATOM 21 C6 U B1334 -102.838 100.520 69.741 1.00 78.29 C
ATOM 22 P C B1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 23 OP1 C B1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 24 OP2 C B1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 25 O5' C B1335 -105.019 95.097 71.713 1.00 38.96 O
TER
Atoms:
OP1: (-99.758,106.059,80.161)
OP2: (-98.446,108.176,80.810)
C3': (-101.830,109.979,77.223)
C1': (-100.546,108.489,75.885)
C5': (-100.052,109.683,79.051)
O4': (-99.642,109.159,76.737)
C8: (-98.895,106.588,76.229)
O2': (-102.953,108.585,75.548)
C6: (-100.098,103.864,74.366)
C5: (-99.749,105.035,75.059)
C4: (-100.612,106.112,74.950)
P: (-99.739,107.511,80.493)
C4': (-100.362,110.051,77.623)
C2': (-101.931,108.621,76.526)
C2: (-101.974,104.992,73.637)
N1: (-101.241,103.875,73.650)
N3: (-101.754,106.154,74.245)
N6: (-99.361,102.749,74.380)
N7: (-98.668,105.350,75.870)
N9: (-100.049,107.120,75.700)
O5': (-100.428,108.323,79.310)
O3': (-102.092,111.047,76.305)
OP2: (-98.446,108.176,80.810)
C3': (-101.830,109.979,77.223)
C1': (-100.546,108.489,75.885)
C5': (-100.052,109.683,79.051)
O4': (-99.642,109.159,76.737)
C8: (-98.895,106.588,76.229)
O2': (-102.953,108.585,75.548)
C6: (-100.098,103.864,74.366)
C5: (-99.749,105.035,75.059)
C4: (-100.612,106.112,74.950)
P: (-99.739,107.511,80.493)
C4': (-100.362,110.051,77.623)
C2': (-101.931,108.621,76.526)
C2: (-101.974,104.992,73.637)
N1: (-101.241,103.875,73.650)
N3: (-101.754,106.154,74.245)
N6: (-99.361,102.749,74.380)
N7: (-98.668,105.350,75.870)
N9: (-100.049,107.120,75.700)
O5': (-100.428,108.323,79.310)
O3': (-102.092,111.047,76.305)
C4: (-103.198,102.733,70.582)
N3: (-102.336,102.380,71.592)
OP1: (-102.839,95.922,65.594)
OP2: (-104.323,97.975,66.030)
C2: (-101.710,101.173,71.757)
C1': (-101.441,98.870,70.968)
C3': (-102.584,96.783,70.647)
O5': (-102.816,97.063,67.798)
O4': (-101.084,98.328,69.713)
C5': (-101.624,96.456,68.304)
P: (-103.047,97.244,66.238)
C4': (-101.383,96.916,69.717)
C2': (-102.345,97.868,71.701)
O2': (-101.684,97.392,72.853)
N1: (-102.013,100.216,70.794)
O4: (-103.744,103.838,70.611)
O2: (-100.942,100.969,72.685)
C6: (-102.838,100.520,69.741)
C5: (-103.422,101.712,69.605)
O3': (-102.573,95.487,71.266)
N3: (-102.336,102.380,71.592)
OP1: (-102.839,95.922,65.594)
OP2: (-104.323,97.975,66.030)
C2: (-101.710,101.173,71.757)
C1': (-101.441,98.870,70.968)
C3': (-102.584,96.783,70.647)
O5': (-102.816,97.063,67.798)
O4': (-101.084,98.328,69.713)
C5': (-101.624,96.456,68.304)
P: (-103.047,97.244,66.238)
C4': (-101.383,96.916,69.717)
C2': (-102.345,97.868,71.701)
O2': (-101.684,97.392,72.853)
N1: (-102.013,100.216,70.794)
O4: (-103.744,103.838,70.611)
O2: (-100.942,100.969,72.685)
C6: (-102.838,100.520,69.741)
C5: (-103.422,101.712,69.605)
O3': (-102.573,95.487,71.266)
Image (generated by PyMOL):