Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2007:A2597
Extra
PDB:
ATOM 1 O3' G A2006 -53.079 -80.545 7.429 1.00 35.17 O
ATOM 2 P A A2007 -54.537 -81.022 7.861 1.00 43.43 P
ATOM 3 OP1 A A2007 -54.678 -80.890 9.336 1.00 44.05 O
ATOM 4 OP2 A A2007 -54.784 -82.307 7.160 1.00 47.52 O
ATOM 5 O5' A A2007 -55.465 -79.908 7.214 1.00 54.81 O
ATOM 6 C5' A A2007 -56.491 -79.361 8.014 1.00 58.94 C
ATOM 7 C4' A A2007 -56.325 -77.854 8.131 1.00 44.78 C
ATOM 8 O4' A A2007 -55.773 -77.311 6.906 1.00 39.77 O
ATOM 9 C3' A A2007 -57.632 -77.110 8.322 1.00 39.43 C
ATOM 10 O3' A A2007 -57.964 -77.084 9.695 1.00 33.95 O
ATOM 11 C2' A A2007 -57.277 -75.732 7.802 1.00 42.28 C
ATOM 12 O2' A A2007 -56.493 -75.016 8.726 1.00 48.62 O
ATOM 13 C1' A A2007 -56.412 -76.087 6.606 1.00 38.97 C
ATOM 14 N9 A A2007 -57.158 -76.178 5.355 1.00 38.03 N
ATOM 15 C8 A A2007 -57.156 -77.187 4.439 1.00 43.69 C
ATOM 16 N7 A A2007 -57.925 -76.963 3.404 1.00 42.03 N
ATOM 17 C5 A A2007 -58.467 -75.720 3.661 1.00 43.69 C
ATOM 18 C6 A A2007 -59.370 -74.903 2.952 1.00 50.21 C
ATOM 19 N6 A A2007 -59.914 -75.230 1.782 1.00 58.66 N
ATOM 20 N1 A A2007 -59.709 -73.719 3.488 1.00 48.48 N
ATOM 21 C2 A A2007 -59.172 -73.382 4.662 1.00 48.55 C
ATOM 22 N3 A A2007 -58.317 -74.061 5.423 1.00 44.46 N
ATOM 23 C4 A A2007 -58.005 -75.229 4.859 1.00 40.53 C
ATOM 24 P A A2008 -59.496 -77.388 10.102 1.00 37.03 P
ATOM 25 OP1 A A2008 -59.555 -77.310 11.590 1.00 36.08 O
ATOM 26 OP2 A A2008 -60.003 -78.597 9.407 1.00 41.88 O
ATOM 27 O5' A A2008 -60.263 -76.152 9.437 1.00 41.96 O
TER
ATOM 1 O3' C B2596 -64.681 -66.099 -2.716 1.00 74.87 O
ATOM 2 P U B2597 -65.448 -67.500 -2.520 1.00 45.28 P
ATOM 3 OP1 U B2597 -66.274 -67.641 -3.735 1.00 53.40 O
ATOM 4 OP2 U B2597 -66.075 -67.489 -1.176 1.00 52.51 O
ATOM 5 O5' U B2597 -64.331 -68.655 -2.487 1.00 53.48 O
ATOM 6 C5' U B2597 -63.850 -69.283 -3.683 1.00 56.37 C
ATOM 7 C4' U B2597 -63.568 -70.769 -3.474 1.00 51.81 C
ATOM 8 O4' U B2597 -62.374 -70.997 -2.661 1.00 45.16 O
ATOM 9 C3' U B2597 -64.694 -71.518 -2.770 1.00 48.70 C
ATOM 10 O3' U B2597 -64.677 -72.873 -3.172 1.00 49.64 O
ATOM 11 C2' U B2597 -64.247 -71.393 -1.328 1.00 54.02 C
ATOM 12 O2' U B2597 -64.926 -72.285 -0.464 1.00 42.05 O
ATOM 13 C1' U B2597 -62.772 -71.761 -1.540 1.00 52.97 C
ATOM 14 N1 U B2597 -61.927 -71.449 -0.351 1.00 54.41 N
ATOM 15 C2 U B2597 -61.421 -72.498 0.399 1.00 55.06 C
ATOM 16 O2 U B2597 -61.607 -73.674 0.122 1.00 56.61 O
ATOM 17 N3 U B2597 -60.679 -72.114 1.488 1.00 53.20 N
ATOM 18 C4 U B2597 -60.415 -70.819 1.891 1.00 47.49 C
ATOM 19 O4 U B2597 -59.741 -70.632 2.891 1.00 46.90 O
ATOM 20 C5 U B2597 -60.980 -69.783 1.068 1.00 46.78 C
ATOM 21 C6 U B2597 -61.704 -70.129 0.000 1.00 51.55 C
ATOM 22 P A B2598 -65.543 -73.310 -4.443 1.00 42.35 P
ATOM 23 OP1 A B2598 -65.040 -74.587 -5.008 1.00 38.88 O
ATOM 24 OP2 A B2598 -65.652 -72.115 -5.313 1.00 48.46 O
ATOM 25 O5' A B2598 -66.950 -73.582 -3.732 1.00 43.78 O
TER
ATOM 2 P A A2007 -54.537 -81.022 7.861 1.00 43.43 P
ATOM 3 OP1 A A2007 -54.678 -80.890 9.336 1.00 44.05 O
ATOM 4 OP2 A A2007 -54.784 -82.307 7.160 1.00 47.52 O
ATOM 5 O5' A A2007 -55.465 -79.908 7.214 1.00 54.81 O
ATOM 6 C5' A A2007 -56.491 -79.361 8.014 1.00 58.94 C
ATOM 7 C4' A A2007 -56.325 -77.854 8.131 1.00 44.78 C
ATOM 8 O4' A A2007 -55.773 -77.311 6.906 1.00 39.77 O
ATOM 9 C3' A A2007 -57.632 -77.110 8.322 1.00 39.43 C
ATOM 10 O3' A A2007 -57.964 -77.084 9.695 1.00 33.95 O
ATOM 11 C2' A A2007 -57.277 -75.732 7.802 1.00 42.28 C
ATOM 12 O2' A A2007 -56.493 -75.016 8.726 1.00 48.62 O
ATOM 13 C1' A A2007 -56.412 -76.087 6.606 1.00 38.97 C
ATOM 14 N9 A A2007 -57.158 -76.178 5.355 1.00 38.03 N
ATOM 15 C8 A A2007 -57.156 -77.187 4.439 1.00 43.69 C
ATOM 16 N7 A A2007 -57.925 -76.963 3.404 1.00 42.03 N
ATOM 17 C5 A A2007 -58.467 -75.720 3.661 1.00 43.69 C
ATOM 18 C6 A A2007 -59.370 -74.903 2.952 1.00 50.21 C
ATOM 19 N6 A A2007 -59.914 -75.230 1.782 1.00 58.66 N
ATOM 20 N1 A A2007 -59.709 -73.719 3.488 1.00 48.48 N
ATOM 21 C2 A A2007 -59.172 -73.382 4.662 1.00 48.55 C
ATOM 22 N3 A A2007 -58.317 -74.061 5.423 1.00 44.46 N
ATOM 23 C4 A A2007 -58.005 -75.229 4.859 1.00 40.53 C
ATOM 24 P A A2008 -59.496 -77.388 10.102 1.00 37.03 P
ATOM 25 OP1 A A2008 -59.555 -77.310 11.590 1.00 36.08 O
ATOM 26 OP2 A A2008 -60.003 -78.597 9.407 1.00 41.88 O
ATOM 27 O5' A A2008 -60.263 -76.152 9.437 1.00 41.96 O
TER
ATOM 1 O3' C B2596 -64.681 -66.099 -2.716 1.00 74.87 O
ATOM 2 P U B2597 -65.448 -67.500 -2.520 1.00 45.28 P
ATOM 3 OP1 U B2597 -66.274 -67.641 -3.735 1.00 53.40 O
ATOM 4 OP2 U B2597 -66.075 -67.489 -1.176 1.00 52.51 O
ATOM 5 O5' U B2597 -64.331 -68.655 -2.487 1.00 53.48 O
ATOM 6 C5' U B2597 -63.850 -69.283 -3.683 1.00 56.37 C
ATOM 7 C4' U B2597 -63.568 -70.769 -3.474 1.00 51.81 C
ATOM 8 O4' U B2597 -62.374 -70.997 -2.661 1.00 45.16 O
ATOM 9 C3' U B2597 -64.694 -71.518 -2.770 1.00 48.70 C
ATOM 10 O3' U B2597 -64.677 -72.873 -3.172 1.00 49.64 O
ATOM 11 C2' U B2597 -64.247 -71.393 -1.328 1.00 54.02 C
ATOM 12 O2' U B2597 -64.926 -72.285 -0.464 1.00 42.05 O
ATOM 13 C1' U B2597 -62.772 -71.761 -1.540 1.00 52.97 C
ATOM 14 N1 U B2597 -61.927 -71.449 -0.351 1.00 54.41 N
ATOM 15 C2 U B2597 -61.421 -72.498 0.399 1.00 55.06 C
ATOM 16 O2 U B2597 -61.607 -73.674 0.122 1.00 56.61 O
ATOM 17 N3 U B2597 -60.679 -72.114 1.488 1.00 53.20 N
ATOM 18 C4 U B2597 -60.415 -70.819 1.891 1.00 47.49 C
ATOM 19 O4 U B2597 -59.741 -70.632 2.891 1.00 46.90 O
ATOM 20 C5 U B2597 -60.980 -69.783 1.068 1.00 46.78 C
ATOM 21 C6 U B2597 -61.704 -70.129 0.000 1.00 51.55 C
ATOM 22 P A B2598 -65.543 -73.310 -4.443 1.00 42.35 P
ATOM 23 OP1 A B2598 -65.040 -74.587 -5.008 1.00 38.88 O
ATOM 24 OP2 A B2598 -65.652 -72.115 -5.313 1.00 48.46 O
ATOM 25 O5' A B2598 -66.950 -73.582 -3.732 1.00 43.78 O
TER
Atoms:
OP1: (-54.678,-80.890,9.336)
OP2: (-54.784,-82.307,7.160)
C3': (-57.632,-77.110,8.322)
C1': (-56.412,-76.087,6.606)
C5': (-56.491,-79.361,8.014)
O4': (-55.773,-77.311,6.906)
C8: (-57.156,-77.187,4.439)
O2': (-56.493,-75.016,8.726)
C6: (-59.370,-74.903,2.952)
C5: (-58.467,-75.720,3.661)
C4: (-58.005,-75.229,4.859)
P: (-54.537,-81.022,7.861)
C4': (-56.325,-77.854,8.131)
C2': (-57.277,-75.732,7.802)
C2: (-59.172,-73.382,4.662)
N1: (-59.709,-73.719,3.488)
N3: (-58.317,-74.061,5.423)
N6: (-59.914,-75.230,1.782)
N7: (-57.925,-76.963,3.404)
N9: (-57.158,-76.178,5.355)
O5': (-55.465,-79.908,7.214)
O3': (-57.964,-77.084,9.695)
OP2: (-54.784,-82.307,7.160)
C3': (-57.632,-77.110,8.322)
C1': (-56.412,-76.087,6.606)
C5': (-56.491,-79.361,8.014)
O4': (-55.773,-77.311,6.906)
C8: (-57.156,-77.187,4.439)
O2': (-56.493,-75.016,8.726)
C6: (-59.370,-74.903,2.952)
C5: (-58.467,-75.720,3.661)
C4: (-58.005,-75.229,4.859)
P: (-54.537,-81.022,7.861)
C4': (-56.325,-77.854,8.131)
C2': (-57.277,-75.732,7.802)
C2: (-59.172,-73.382,4.662)
N1: (-59.709,-73.719,3.488)
N3: (-58.317,-74.061,5.423)
N6: (-59.914,-75.230,1.782)
N7: (-57.925,-76.963,3.404)
N9: (-57.158,-76.178,5.355)
O5': (-55.465,-79.908,7.214)
O3': (-57.964,-77.084,9.695)
C4: (-60.415,-70.819,1.891)
N3: (-60.679,-72.114,1.488)
OP1: (-66.274,-67.641,-3.735)
OP2: (-66.075,-67.489,-1.176)
C2: (-61.421,-72.498,0.399)
C1': (-62.772,-71.761,-1.540)
C3': (-64.694,-71.518,-2.770)
O5': (-64.331,-68.655,-2.487)
O4': (-62.374,-70.997,-2.661)
C5': (-63.850,-69.283,-3.683)
P: (-65.448,-67.500,-2.520)
C4': (-63.568,-70.769,-3.474)
C2': (-64.247,-71.393,-1.328)
O2': (-64.926,-72.285,-0.464)
N1: (-61.927,-71.449,-0.351)
O4: (-59.741,-70.632,2.891)
O2: (-61.607,-73.674,0.122)
C6: (-61.704,-70.129,0.000)
C5: (-60.980,-69.783,1.068)
O3': (-64.677,-72.873,-3.172)
N3: (-60.679,-72.114,1.488)
OP1: (-66.274,-67.641,-3.735)
OP2: (-66.075,-67.489,-1.176)
C2: (-61.421,-72.498,0.399)
C1': (-62.772,-71.761,-1.540)
C3': (-64.694,-71.518,-2.770)
O5': (-64.331,-68.655,-2.487)
O4': (-62.374,-70.997,-2.661)
C5': (-63.850,-69.283,-3.683)
P: (-65.448,-67.500,-2.520)
C4': (-63.568,-70.769,-3.474)
C2': (-64.247,-71.393,-1.328)
O2': (-64.926,-72.285,-0.464)
N1: (-61.927,-71.449,-0.351)
O4: (-59.741,-70.632,2.891)
O2: (-61.607,-73.674,0.122)
C6: (-61.704,-70.129,0.000)
C5: (-60.980,-69.783,1.068)
O3': (-64.677,-72.873,-3.172)
Image (generated by PyMOL):