Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A541:A856
Extra
PDB:
ATOM 1 O3' C A 540 -13.908 75.365 82.175 1.00 21.35 O
ATOM 2 P A A 541 -13.418 74.326 81.040 1.00 8.13 P
ATOM 3 OP1 A A 541 -14.178 73.054 81.246 1.00 4.86 O
ATOM 4 OP2 A A 541 -11.908 74.299 80.981 1.00 4.86 O
ATOM 5 O5' A A 541 -13.895 75.010 79.683 1.00 0.79 O
ATOM 6 C5' A A 541 -13.556 74.417 78.422 1.00 0.79 C
ATOM 7 C4' A A 541 -13.676 75.419 77.303 1.00 0.79 C
ATOM 8 O4' A A 541 -15.008 75.947 77.233 1.00 0.79 O
ATOM 9 C3' A A 541 -12.798 76.637 77.428 1.00 0.79 C
ATOM 10 O3' A A 541 -11.588 76.285 76.786 1.00 0.79 O
ATOM 11 C2' A A 541 -13.541 77.710 76.621 1.00 0.79 C
ATOM 12 O2' A A 541 -13.022 77.840 75.320 1.00 0.79 O
ATOM 13 C1' A A 541 -14.963 77.155 76.530 1.00 0.79 C
ATOM 14 N9 A A 541 -16.084 77.979 76.959 1.00 6.51 N
ATOM 15 C8 A A 541 -17.338 77.904 76.419 1.00 7.44 C
ATOM 16 N7 A A 541 -18.206 78.704 76.973 1.00 8.80 N
ATOM 17 C5 A A 541 -17.472 79.355 77.950 1.00 7.97 C
ATOM 18 C6 A A 541 -17.824 80.331 78.891 1.00 8.17 C
ATOM 19 N6 A A 541 -19.067 80.810 79.025 1.00 7.60 N
ATOM 20 N1 A A 541 -16.856 80.799 79.702 1.00 9.36 N
ATOM 21 C2 A A 541 -15.623 80.292 79.577 1.00 6.40 C
ATOM 22 N3 A A 541 -15.173 79.360 78.741 1.00 8.40 N
ATOM 23 C4 A A 541 -16.158 78.929 77.942 1.00 7.65 C
ATOM 24 P C A 542 -10.229 77.004 77.196 1.00 31.71 P
ATOM 25 OP1 C A 542 -10.138 76.924 78.674 1.00 29.93 O
ATOM 26 OP2 C A 542 -10.142 78.318 76.512 1.00 33.56 O
ATOM 27 O5' C A 542 -9.114 76.050 76.606 1.00 34.24 O
TER
ATOM 1 O3' C B 855 -18.815 88.719 85.705 1.00 7.34 O
ATOM 2 P U B 856 -19.152 87.643 86.844 1.00 68.09 P
ATOM 3 OP1 U B 856 -20.273 88.201 87.659 1.00 31.15 O
ATOM 4 OP2 U B 856 -17.893 87.201 87.508 1.00 32.19 O
ATOM 5 O5' U B 856 -19.728 86.418 86.023 1.00 15.23 O
ATOM 6 C5' U B 856 -20.948 86.567 85.292 1.00 15.40 C
ATOM 7 C4' U B 856 -21.392 85.238 84.735 1.00 16.95 C
ATOM 8 O4' U B 856 -20.464 84.816 83.704 1.00 17.58 O
ATOM 9 C3' U B 856 -21.468 84.107 85.751 1.00 16.85 C
ATOM 10 O3' U B 856 -22.588 83.304 85.452 1.00 17.26 O
ATOM 11 C2' U B 856 -20.181 83.337 85.502 1.00 17.44 C
ATOM 12 O2' U B 856 -20.279 81.976 85.840 1.00 18.85 O
ATOM 13 C1' U B 856 -20.006 83.523 83.998 1.00 18.12 C
ATOM 14 N1 U B 856 -18.632 83.372 83.496 1.00 4.73 N
ATOM 15 C2 U B 856 -18.427 82.366 82.589 1.00 4.33 C
ATOM 16 O2 U B 856 -19.344 81.706 82.138 1.00 4.30 O
ATOM 17 N3 U B 856 -17.122 82.168 82.217 1.00 3.92 N
ATOM 18 C4 U B 856 -16.019 82.881 82.640 1.00 5.55 C
ATOM 19 O4 U B 856 -14.877 82.483 82.345 1.00 6.85 O
ATOM 20 C5 U B 856 -16.328 83.960 83.535 1.00 5.09 C
ATOM 21 C6 U B 856 -17.594 84.163 83.921 1.00 4.98 C
ATOM 22 P G B 857 -23.625 82.930 86.616 1.00 43.02 P
ATOM 23 OP1 G B 857 -22.995 83.299 87.892 1.00 20.00 O
ATOM 24 OP2 G B 857 -24.020 81.525 86.379 1.00 21.98 O
ATOM 25 O5' G B 857 -24.880 83.888 86.382 1.00 14.73 O
TER
ATOM 2 P A A 541 -13.418 74.326 81.040 1.00 8.13 P
ATOM 3 OP1 A A 541 -14.178 73.054 81.246 1.00 4.86 O
ATOM 4 OP2 A A 541 -11.908 74.299 80.981 1.00 4.86 O
ATOM 5 O5' A A 541 -13.895 75.010 79.683 1.00 0.79 O
ATOM 6 C5' A A 541 -13.556 74.417 78.422 1.00 0.79 C
ATOM 7 C4' A A 541 -13.676 75.419 77.303 1.00 0.79 C
ATOM 8 O4' A A 541 -15.008 75.947 77.233 1.00 0.79 O
ATOM 9 C3' A A 541 -12.798 76.637 77.428 1.00 0.79 C
ATOM 10 O3' A A 541 -11.588 76.285 76.786 1.00 0.79 O
ATOM 11 C2' A A 541 -13.541 77.710 76.621 1.00 0.79 C
ATOM 12 O2' A A 541 -13.022 77.840 75.320 1.00 0.79 O
ATOM 13 C1' A A 541 -14.963 77.155 76.530 1.00 0.79 C
ATOM 14 N9 A A 541 -16.084 77.979 76.959 1.00 6.51 N
ATOM 15 C8 A A 541 -17.338 77.904 76.419 1.00 7.44 C
ATOM 16 N7 A A 541 -18.206 78.704 76.973 1.00 8.80 N
ATOM 17 C5 A A 541 -17.472 79.355 77.950 1.00 7.97 C
ATOM 18 C6 A A 541 -17.824 80.331 78.891 1.00 8.17 C
ATOM 19 N6 A A 541 -19.067 80.810 79.025 1.00 7.60 N
ATOM 20 N1 A A 541 -16.856 80.799 79.702 1.00 9.36 N
ATOM 21 C2 A A 541 -15.623 80.292 79.577 1.00 6.40 C
ATOM 22 N3 A A 541 -15.173 79.360 78.741 1.00 8.40 N
ATOM 23 C4 A A 541 -16.158 78.929 77.942 1.00 7.65 C
ATOM 24 P C A 542 -10.229 77.004 77.196 1.00 31.71 P
ATOM 25 OP1 C A 542 -10.138 76.924 78.674 1.00 29.93 O
ATOM 26 OP2 C A 542 -10.142 78.318 76.512 1.00 33.56 O
ATOM 27 O5' C A 542 -9.114 76.050 76.606 1.00 34.24 O
TER
ATOM 1 O3' C B 855 -18.815 88.719 85.705 1.00 7.34 O
ATOM 2 P U B 856 -19.152 87.643 86.844 1.00 68.09 P
ATOM 3 OP1 U B 856 -20.273 88.201 87.659 1.00 31.15 O
ATOM 4 OP2 U B 856 -17.893 87.201 87.508 1.00 32.19 O
ATOM 5 O5' U B 856 -19.728 86.418 86.023 1.00 15.23 O
ATOM 6 C5' U B 856 -20.948 86.567 85.292 1.00 15.40 C
ATOM 7 C4' U B 856 -21.392 85.238 84.735 1.00 16.95 C
ATOM 8 O4' U B 856 -20.464 84.816 83.704 1.00 17.58 O
ATOM 9 C3' U B 856 -21.468 84.107 85.751 1.00 16.85 C
ATOM 10 O3' U B 856 -22.588 83.304 85.452 1.00 17.26 O
ATOM 11 C2' U B 856 -20.181 83.337 85.502 1.00 17.44 C
ATOM 12 O2' U B 856 -20.279 81.976 85.840 1.00 18.85 O
ATOM 13 C1' U B 856 -20.006 83.523 83.998 1.00 18.12 C
ATOM 14 N1 U B 856 -18.632 83.372 83.496 1.00 4.73 N
ATOM 15 C2 U B 856 -18.427 82.366 82.589 1.00 4.33 C
ATOM 16 O2 U B 856 -19.344 81.706 82.138 1.00 4.30 O
ATOM 17 N3 U B 856 -17.122 82.168 82.217 1.00 3.92 N
ATOM 18 C4 U B 856 -16.019 82.881 82.640 1.00 5.55 C
ATOM 19 O4 U B 856 -14.877 82.483 82.345 1.00 6.85 O
ATOM 20 C5 U B 856 -16.328 83.960 83.535 1.00 5.09 C
ATOM 21 C6 U B 856 -17.594 84.163 83.921 1.00 4.98 C
ATOM 22 P G B 857 -23.625 82.930 86.616 1.00 43.02 P
ATOM 23 OP1 G B 857 -22.995 83.299 87.892 1.00 20.00 O
ATOM 24 OP2 G B 857 -24.020 81.525 86.379 1.00 21.98 O
ATOM 25 O5' G B 857 -24.880 83.888 86.382 1.00 14.73 O
TER
Atoms:
OP1: (-14.178,73.054,81.246)
OP2: (-11.908,74.299,80.981)
C3': (-12.798,76.637,77.428)
C1': (-14.963,77.155,76.530)
C5': (-13.556,74.417,78.422)
O4': (-15.008,75.947,77.233)
C8: (-17.338,77.904,76.419)
O2': (-13.022,77.840,75.320)
C6: (-17.824,80.331,78.891)
C5: (-17.472,79.355,77.950)
C4: (-16.158,78.929,77.942)
P: (-13.418,74.326,81.040)
C4': (-13.676,75.419,77.303)
C2': (-13.541,77.710,76.621)
C2: (-15.623,80.292,79.577)
N1: (-16.856,80.799,79.702)
N3: (-15.173,79.360,78.741)
N6: (-19.067,80.810,79.025)
N7: (-18.206,78.704,76.973)
N9: (-16.084,77.979,76.959)
O5': (-13.895,75.010,79.683)
O3': (-11.588,76.285,76.786)
OP2: (-11.908,74.299,80.981)
C3': (-12.798,76.637,77.428)
C1': (-14.963,77.155,76.530)
C5': (-13.556,74.417,78.422)
O4': (-15.008,75.947,77.233)
C8: (-17.338,77.904,76.419)
O2': (-13.022,77.840,75.320)
C6: (-17.824,80.331,78.891)
C5: (-17.472,79.355,77.950)
C4: (-16.158,78.929,77.942)
P: (-13.418,74.326,81.040)
C4': (-13.676,75.419,77.303)
C2': (-13.541,77.710,76.621)
C2: (-15.623,80.292,79.577)
N1: (-16.856,80.799,79.702)
N3: (-15.173,79.360,78.741)
N6: (-19.067,80.810,79.025)
N7: (-18.206,78.704,76.973)
N9: (-16.084,77.979,76.959)
O5': (-13.895,75.010,79.683)
O3': (-11.588,76.285,76.786)
C4: (-16.019,82.881,82.640)
N3: (-17.122,82.168,82.217)
OP1: (-20.273,88.201,87.659)
OP2: (-17.893,87.201,87.508)
C2: (-18.427,82.366,82.589)
C1': (-20.006,83.523,83.998)
C3': (-21.468,84.107,85.751)
O5': (-19.728,86.418,86.023)
O4': (-20.464,84.816,83.704)
C5': (-20.948,86.567,85.292)
P: (-19.152,87.643,86.844)
C4': (-21.392,85.238,84.735)
C2': (-20.181,83.337,85.502)
O2': (-20.279,81.976,85.840)
N1: (-18.632,83.372,83.496)
O4: (-14.877,82.483,82.345)
O2: (-19.344,81.706,82.138)
C6: (-17.594,84.163,83.921)
C5: (-16.328,83.960,83.535)
O3': (-22.588,83.304,85.452)
N3: (-17.122,82.168,82.217)
OP1: (-20.273,88.201,87.659)
OP2: (-17.893,87.201,87.508)
C2: (-18.427,82.366,82.589)
C1': (-20.006,83.523,83.998)
C3': (-21.468,84.107,85.751)
O5': (-19.728,86.418,86.023)
O4': (-20.464,84.816,83.704)
C5': (-20.948,86.567,85.292)
P: (-19.152,87.643,86.844)
C4': (-21.392,85.238,84.735)
C2': (-20.181,83.337,85.502)
O2': (-20.279,81.976,85.840)
N1: (-18.632,83.372,83.496)
O4: (-14.877,82.483,82.345)
O2: (-19.344,81.706,82.138)
C6: (-17.594,84.163,83.921)
C5: (-16.328,83.960,83.535)
O3': (-22.588,83.304,85.452)
Image (generated by PyMOL):