Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2280:A2337
Extra
PDB:
ATOM 1 O3' G A2279 -136.430 -33.907 43.864 1.00 0.71 O
ATOM 2 P A A2280 -136.975 -32.623 43.074 1.00 4.04 P
ATOM 3 OP1 A A2280 -135.908 -31.583 43.089 1.00 4.04 O
ATOM 4 OP2 A A2280 -138.295 -32.304 43.663 1.00 4.04 O
ATOM 5 O5' A A2280 -137.170 -33.167 41.600 1.00 4.04 O
ATOM 6 C5' A A2280 -138.298 -33.952 41.246 1.00 4.04 C
ATOM 7 C4' A A2280 -137.975 -34.852 40.090 1.00 4.04 C
ATOM 8 O4' A A2280 -136.937 -35.785 40.499 1.00 4.04 O
ATOM 9 C3' A A2280 -139.113 -35.724 39.598 1.00 4.04 C
ATOM 10 O3' A A2280 -138.790 -36.162 38.285 1.00 4.04 O
ATOM 11 C2' A A2280 -138.975 -36.909 40.527 1.00 4.04 C
ATOM 12 O2' A A2280 -139.670 -38.056 40.116 1.00 4.04 O
ATOM 13 C1' A A2280 -137.463 -37.097 40.454 1.00 4.04 C
ATOM 14 N9 A A2280 -136.887 -37.864 41.547 1.00 4.06 N
ATOM 15 C8 A A2280 -135.824 -38.703 41.482 1.00 4.06 C
ATOM 16 N7 A A2280 -135.522 -39.248 42.623 1.00 4.06 N
ATOM 17 C5 A A2280 -136.442 -38.727 43.477 1.00 4.06 C
ATOM 18 C6 A A2280 -136.620 -38.914 44.829 1.00 4.06 C
ATOM 19 N6 A A2280 -135.858 -39.723 45.547 1.00 4.06 N
ATOM 20 N1 A A2280 -137.623 -38.221 45.408 1.00 4.06 N
ATOM 21 C2 A A2280 -138.382 -37.394 44.659 1.00 4.06 C
ATOM 22 N3 A A2280 -138.304 -37.136 43.353 1.00 4.06 N
ATOM 23 C4 A A2280 -137.292 -37.854 42.835 1.00 4.06 C
ATOM 24 P A A2281 -139.494 -35.541 36.990 1.00 0.14 P
ATOM 25 OP1 A A2281 -138.732 -34.315 36.604 1.00 0.14 O
ATOM 26 OP2 A A2281 -140.942 -35.443 37.305 1.00 0.14 O
ATOM 27 O5' A A2281 -139.254 -36.679 35.903 1.00 0.14 O
TER
ATOM 1 O3' U B2336 -142.586 -40.374 53.049 1.00 9.32 O
ATOM 2 P U B2337 -141.226 -39.841 53.709 1.00 0.01 P
ATOM 3 OP1 U B2337 -141.308 -40.097 55.158 1.00 0.01 O
ATOM 4 OP2 U B2337 -141.009 -38.456 53.226 1.00 0.01 O
ATOM 5 O5' U B2337 -140.156 -40.794 53.072 1.00 0.01 O
ATOM 6 C5' U B2337 -140.298 -42.200 53.168 1.00 0.01 C
ATOM 7 C4' U B2337 -139.308 -42.872 52.286 1.00 0.01 C
ATOM 8 O4' U B2337 -139.386 -42.242 50.999 1.00 0.01 O
ATOM 9 C3' U B2337 -137.868 -42.713 52.729 1.00 0.01 C
ATOM 10 O3' U B2337 -137.103 -43.794 52.233 1.00 0.01 O
ATOM 11 C2' U B2337 -137.450 -41.445 52.019 1.00 0.01 C
ATOM 12 O2' U B2337 -136.069 -41.334 51.803 1.00 0.01 O
ATOM 13 C1' U B2337 -138.180 -41.596 50.710 1.00 0.01 C
ATOM 14 N1 U B2337 -138.506 -40.345 50.049 1.00 0.32 N
ATOM 15 C2 U B2337 -137.719 -39.990 48.985 1.00 0.32 C
ATOM 16 O2 U B2337 -136.747 -40.659 48.652 1.00 0.32 O
ATOM 17 N3 U B2337 -138.124 -38.832 48.364 1.00 0.32 N
ATOM 18 C4 U B2337 -139.196 -38.040 48.677 1.00 0.32 C
ATOM 19 O4 U B2337 -139.411 -37.040 48.026 1.00 0.32 O
ATOM 20 C5 U B2337 -139.967 -38.475 49.781 1.00 0.32 C
ATOM 21 C6 U B2337 -139.609 -39.601 50.418 1.00 0.32 C
ATOM 22 P G B2338 -137.175 -45.239 52.913 1.00 0.01 P
ATOM 23 OP1 G B2338 -138.493 -45.360 53.591 1.00 0.01 O
ATOM 24 OP2 G B2338 -135.933 -45.393 53.712 1.00 0.01 O
ATOM 25 O5' G B2338 -137.120 -46.201 51.652 1.00 0.01 O
TER
ATOM 2 P A A2280 -136.975 -32.623 43.074 1.00 4.04 P
ATOM 3 OP1 A A2280 -135.908 -31.583 43.089 1.00 4.04 O
ATOM 4 OP2 A A2280 -138.295 -32.304 43.663 1.00 4.04 O
ATOM 5 O5' A A2280 -137.170 -33.167 41.600 1.00 4.04 O
ATOM 6 C5' A A2280 -138.298 -33.952 41.246 1.00 4.04 C
ATOM 7 C4' A A2280 -137.975 -34.852 40.090 1.00 4.04 C
ATOM 8 O4' A A2280 -136.937 -35.785 40.499 1.00 4.04 O
ATOM 9 C3' A A2280 -139.113 -35.724 39.598 1.00 4.04 C
ATOM 10 O3' A A2280 -138.790 -36.162 38.285 1.00 4.04 O
ATOM 11 C2' A A2280 -138.975 -36.909 40.527 1.00 4.04 C
ATOM 12 O2' A A2280 -139.670 -38.056 40.116 1.00 4.04 O
ATOM 13 C1' A A2280 -137.463 -37.097 40.454 1.00 4.04 C
ATOM 14 N9 A A2280 -136.887 -37.864 41.547 1.00 4.06 N
ATOM 15 C8 A A2280 -135.824 -38.703 41.482 1.00 4.06 C
ATOM 16 N7 A A2280 -135.522 -39.248 42.623 1.00 4.06 N
ATOM 17 C5 A A2280 -136.442 -38.727 43.477 1.00 4.06 C
ATOM 18 C6 A A2280 -136.620 -38.914 44.829 1.00 4.06 C
ATOM 19 N6 A A2280 -135.858 -39.723 45.547 1.00 4.06 N
ATOM 20 N1 A A2280 -137.623 -38.221 45.408 1.00 4.06 N
ATOM 21 C2 A A2280 -138.382 -37.394 44.659 1.00 4.06 C
ATOM 22 N3 A A2280 -138.304 -37.136 43.353 1.00 4.06 N
ATOM 23 C4 A A2280 -137.292 -37.854 42.835 1.00 4.06 C
ATOM 24 P A A2281 -139.494 -35.541 36.990 1.00 0.14 P
ATOM 25 OP1 A A2281 -138.732 -34.315 36.604 1.00 0.14 O
ATOM 26 OP2 A A2281 -140.942 -35.443 37.305 1.00 0.14 O
ATOM 27 O5' A A2281 -139.254 -36.679 35.903 1.00 0.14 O
TER
ATOM 1 O3' U B2336 -142.586 -40.374 53.049 1.00 9.32 O
ATOM 2 P U B2337 -141.226 -39.841 53.709 1.00 0.01 P
ATOM 3 OP1 U B2337 -141.308 -40.097 55.158 1.00 0.01 O
ATOM 4 OP2 U B2337 -141.009 -38.456 53.226 1.00 0.01 O
ATOM 5 O5' U B2337 -140.156 -40.794 53.072 1.00 0.01 O
ATOM 6 C5' U B2337 -140.298 -42.200 53.168 1.00 0.01 C
ATOM 7 C4' U B2337 -139.308 -42.872 52.286 1.00 0.01 C
ATOM 8 O4' U B2337 -139.386 -42.242 50.999 1.00 0.01 O
ATOM 9 C3' U B2337 -137.868 -42.713 52.729 1.00 0.01 C
ATOM 10 O3' U B2337 -137.103 -43.794 52.233 1.00 0.01 O
ATOM 11 C2' U B2337 -137.450 -41.445 52.019 1.00 0.01 C
ATOM 12 O2' U B2337 -136.069 -41.334 51.803 1.00 0.01 O
ATOM 13 C1' U B2337 -138.180 -41.596 50.710 1.00 0.01 C
ATOM 14 N1 U B2337 -138.506 -40.345 50.049 1.00 0.32 N
ATOM 15 C2 U B2337 -137.719 -39.990 48.985 1.00 0.32 C
ATOM 16 O2 U B2337 -136.747 -40.659 48.652 1.00 0.32 O
ATOM 17 N3 U B2337 -138.124 -38.832 48.364 1.00 0.32 N
ATOM 18 C4 U B2337 -139.196 -38.040 48.677 1.00 0.32 C
ATOM 19 O4 U B2337 -139.411 -37.040 48.026 1.00 0.32 O
ATOM 20 C5 U B2337 -139.967 -38.475 49.781 1.00 0.32 C
ATOM 21 C6 U B2337 -139.609 -39.601 50.418 1.00 0.32 C
ATOM 22 P G B2338 -137.175 -45.239 52.913 1.00 0.01 P
ATOM 23 OP1 G B2338 -138.493 -45.360 53.591 1.00 0.01 O
ATOM 24 OP2 G B2338 -135.933 -45.393 53.712 1.00 0.01 O
ATOM 25 O5' G B2338 -137.120 -46.201 51.652 1.00 0.01 O
TER
Atoms:
OP1: (-135.908,-31.583,43.089)
OP2: (-138.295,-32.304,43.663)
C3': (-139.113,-35.724,39.598)
C1': (-137.463,-37.097,40.454)
C5': (-138.298,-33.952,41.246)
O4': (-136.937,-35.785,40.499)
C8: (-135.824,-38.703,41.482)
O2': (-139.670,-38.056,40.116)
C6: (-136.620,-38.914,44.829)
C5: (-136.442,-38.727,43.477)
C4: (-137.292,-37.854,42.835)
P: (-136.975,-32.623,43.074)
C4': (-137.975,-34.852,40.090)
C2': (-138.975,-36.909,40.527)
C2: (-138.382,-37.394,44.659)
N1: (-137.623,-38.221,45.408)
N3: (-138.304,-37.136,43.353)
N6: (-135.858,-39.723,45.547)
N7: (-135.522,-39.248,42.623)
N9: (-136.887,-37.864,41.547)
O5': (-137.170,-33.167,41.600)
O3': (-138.790,-36.162,38.285)
OP2: (-138.295,-32.304,43.663)
C3': (-139.113,-35.724,39.598)
C1': (-137.463,-37.097,40.454)
C5': (-138.298,-33.952,41.246)
O4': (-136.937,-35.785,40.499)
C8: (-135.824,-38.703,41.482)
O2': (-139.670,-38.056,40.116)
C6: (-136.620,-38.914,44.829)
C5: (-136.442,-38.727,43.477)
C4: (-137.292,-37.854,42.835)
P: (-136.975,-32.623,43.074)
C4': (-137.975,-34.852,40.090)
C2': (-138.975,-36.909,40.527)
C2: (-138.382,-37.394,44.659)
N1: (-137.623,-38.221,45.408)
N3: (-138.304,-37.136,43.353)
N6: (-135.858,-39.723,45.547)
N7: (-135.522,-39.248,42.623)
N9: (-136.887,-37.864,41.547)
O5': (-137.170,-33.167,41.600)
O3': (-138.790,-36.162,38.285)
C4: (-139.196,-38.040,48.677)
N3: (-138.124,-38.832,48.364)
OP1: (-141.308,-40.097,55.158)
OP2: (-141.009,-38.456,53.226)
C2: (-137.719,-39.990,48.985)
C1': (-138.180,-41.596,50.710)
C3': (-137.868,-42.713,52.729)
O5': (-140.156,-40.794,53.072)
O4': (-139.386,-42.242,50.999)
C5': (-140.298,-42.200,53.168)
P: (-141.226,-39.841,53.709)
C4': (-139.308,-42.872,52.286)
C2': (-137.450,-41.445,52.019)
O2': (-136.069,-41.334,51.803)
N1: (-138.506,-40.345,50.049)
O4: (-139.411,-37.040,48.026)
O2: (-136.747,-40.659,48.652)
C6: (-139.609,-39.601,50.418)
C5: (-139.967,-38.475,49.781)
O3': (-137.103,-43.794,52.233)
N3: (-138.124,-38.832,48.364)
OP1: (-141.308,-40.097,55.158)
OP2: (-141.009,-38.456,53.226)
C2: (-137.719,-39.990,48.985)
C1': (-138.180,-41.596,50.710)
C3': (-137.868,-42.713,52.729)
O5': (-140.156,-40.794,53.072)
O4': (-139.386,-42.242,50.999)
C5': (-140.298,-42.200,53.168)
P: (-141.226,-39.841,53.709)
C4': (-139.308,-42.872,52.286)
C2': (-137.450,-41.445,52.019)
O2': (-136.069,-41.334,51.803)
N1: (-138.506,-40.345,50.049)
O4: (-139.411,-37.040,48.026)
O2: (-136.747,-40.659,48.652)
C6: (-139.609,-39.601,50.418)
C5: (-139.967,-38.475,49.781)
O3': (-137.103,-43.794,52.233)
Image (generated by PyMOL):