Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1928:A2518
Extra
PDB:
ATOM 1 O3' G A1927 51.257 -79.976 -9.387 1.00 39.02 O
ATOM 2 P A A1928 52.752 -80.483 -9.594 1.00 37.94 P
ATOM 3 OP1 A A1928 52.948 -80.632 -11.055 1.00 32.16 O
ATOM 4 OP2 A A1928 52.988 -81.646 -8.709 1.00 37.53 O
ATOM 5 O5' A A1928 53.570 -79.241 -9.022 1.00 32.22 O
ATOM 6 C5' A A1928 54.685 -78.693 -9.719 1.00 36.89 C
ATOM 7 C4' A A1928 54.505 -77.196 -9.934 1.00 35.55 C
ATOM 8 O4' A A1928 53.948 -76.581 -8.755 1.00 35.42 O
ATOM 9 C3' A A1928 55.817 -76.478 -10.154 1.00 34.44 C
ATOM 10 O3' A A1928 56.189 -76.514 -11.504 1.00 30.15 O
ATOM 11 C2' A A1928 55.578 -75.077 -9.617 1.00 35.03 C
ATOM 12 O2' A A1928 55.013 -74.160 -10.526 1.00 37.66 O
ATOM 13 C1' A A1928 54.610 -75.362 -8.480 1.00 32.40 C
ATOM 14 N9 A A1928 55.314 -75.524 -7.218 1.00 34.61 N
ATOM 15 C8 A A1928 55.413 -76.659 -6.447 1.00 36.41 C
ATOM 16 N7 A A1928 56.080 -76.484 -5.338 1.00 38.66 N
ATOM 17 C5 A A1928 56.458 -75.151 -5.380 1.00 36.45 C
ATOM 18 C6 A A1928 57.175 -74.343 -4.485 1.00 34.25 C
ATOM 19 N6 A A1928 57.673 -74.794 -3.326 1.00 32.02 N
ATOM 20 N1 A A1928 57.366 -73.040 -4.825 1.00 34.59 N
ATOM 21 C2 A A1928 56.868 -72.603 -5.999 1.00 35.59 C
ATOM 22 N3 A A1928 56.180 -73.272 -6.928 1.00 31.77 N
ATOM 23 C4 A A1928 56.004 -74.552 -6.547 1.00 35.62 C
ATOM 24 P A A1929 57.675 -76.938 -11.872 1.00 37.49 P
ATOM 25 OP1 A A1929 57.718 -77.062 -13.348 1.00 44.51 O
ATOM 26 OP2 A A1929 58.058 -78.096 -11.013 1.00 38.69 O
ATOM 27 O5' A A1929 58.518 -75.665 -11.428 1.00 36.59 O
TER
ATOM 1 O3' C B2517 62.642 -65.843 1.588 1.00 48.14 O
ATOM 2 P U B2518 63.474 -67.191 1.424 1.00 42.12 P
ATOM 3 OP1 U B2518 64.118 -67.471 2.742 1.00 37.52 O
ATOM 4 OP2 U B2518 64.315 -67.026 0.200 1.00 39.60 O
ATOM 5 O5' U B2518 62.352 -68.287 1.151 1.00 44.29 O
ATOM 6 C5' U B2518 61.818 -69.112 2.202 1.00 40.17 C
ATOM 7 C4' U B2518 61.509 -70.500 1.682 1.00 32.41 C
ATOM 8 O4' U B2518 60.290 -70.490 0.920 1.00 31.34 O
ATOM 9 C3' U B2518 62.589 -71.035 0.755 1.00 33.76 C
ATOM 10 O3' U B2518 63.580 -71.761 1.510 1.00 38.97 O
ATOM 11 C2' U B2518 61.862 -71.820 -0.335 1.00 36.81 C
ATOM 12 O2' U B2518 62.177 -73.208 -0.340 1.00 33.05 O
ATOM 13 C1' U B2518 60.382 -71.414 -0.143 1.00 34.66 C
ATOM 14 N1 U B2518 59.681 -70.828 -1.301 1.00 33.68 N
ATOM 15 C2 U B2518 59.250 -71.672 -2.321 1.00 41.40 C
ATOM 16 O2 U B2518 59.365 -72.885 -2.283 1.00 44.48 O
ATOM 17 N3 U B2518 58.661 -71.035 -3.388 1.00 43.06 N
ATOM 18 C4 U B2518 58.436 -69.678 -3.534 1.00 48.92 C
ATOM 19 O4 U B2518 57.916 -69.258 -4.569 1.00 59.23 O
ATOM 20 C5 U B2518 58.866 -68.879 -2.430 1.00 46.52 C
ATOM 21 C6 U B2518 59.460 -69.466 -1.379 1.00 43.38 C
ATOM 22 P A B2519 63.151 -72.851 2.634 1.00 44.61 P
ATOM 23 OP1 A B2519 61.900 -73.556 2.272 1.00 33.72 O
ATOM 24 OP2 A B2519 63.276 -72.223 3.981 1.00 35.57 O
ATOM 25 O5' A B2519 64.335 -73.898 2.554 1.00 42.14 O
TER
ATOM 2 P A A1928 52.752 -80.483 -9.594 1.00 37.94 P
ATOM 3 OP1 A A1928 52.948 -80.632 -11.055 1.00 32.16 O
ATOM 4 OP2 A A1928 52.988 -81.646 -8.709 1.00 37.53 O
ATOM 5 O5' A A1928 53.570 -79.241 -9.022 1.00 32.22 O
ATOM 6 C5' A A1928 54.685 -78.693 -9.719 1.00 36.89 C
ATOM 7 C4' A A1928 54.505 -77.196 -9.934 1.00 35.55 C
ATOM 8 O4' A A1928 53.948 -76.581 -8.755 1.00 35.42 O
ATOM 9 C3' A A1928 55.817 -76.478 -10.154 1.00 34.44 C
ATOM 10 O3' A A1928 56.189 -76.514 -11.504 1.00 30.15 O
ATOM 11 C2' A A1928 55.578 -75.077 -9.617 1.00 35.03 C
ATOM 12 O2' A A1928 55.013 -74.160 -10.526 1.00 37.66 O
ATOM 13 C1' A A1928 54.610 -75.362 -8.480 1.00 32.40 C
ATOM 14 N9 A A1928 55.314 -75.524 -7.218 1.00 34.61 N
ATOM 15 C8 A A1928 55.413 -76.659 -6.447 1.00 36.41 C
ATOM 16 N7 A A1928 56.080 -76.484 -5.338 1.00 38.66 N
ATOM 17 C5 A A1928 56.458 -75.151 -5.380 1.00 36.45 C
ATOM 18 C6 A A1928 57.175 -74.343 -4.485 1.00 34.25 C
ATOM 19 N6 A A1928 57.673 -74.794 -3.326 1.00 32.02 N
ATOM 20 N1 A A1928 57.366 -73.040 -4.825 1.00 34.59 N
ATOM 21 C2 A A1928 56.868 -72.603 -5.999 1.00 35.59 C
ATOM 22 N3 A A1928 56.180 -73.272 -6.928 1.00 31.77 N
ATOM 23 C4 A A1928 56.004 -74.552 -6.547 1.00 35.62 C
ATOM 24 P A A1929 57.675 -76.938 -11.872 1.00 37.49 P
ATOM 25 OP1 A A1929 57.718 -77.062 -13.348 1.00 44.51 O
ATOM 26 OP2 A A1929 58.058 -78.096 -11.013 1.00 38.69 O
ATOM 27 O5' A A1929 58.518 -75.665 -11.428 1.00 36.59 O
TER
ATOM 1 O3' C B2517 62.642 -65.843 1.588 1.00 48.14 O
ATOM 2 P U B2518 63.474 -67.191 1.424 1.00 42.12 P
ATOM 3 OP1 U B2518 64.118 -67.471 2.742 1.00 37.52 O
ATOM 4 OP2 U B2518 64.315 -67.026 0.200 1.00 39.60 O
ATOM 5 O5' U B2518 62.352 -68.287 1.151 1.00 44.29 O
ATOM 6 C5' U B2518 61.818 -69.112 2.202 1.00 40.17 C
ATOM 7 C4' U B2518 61.509 -70.500 1.682 1.00 32.41 C
ATOM 8 O4' U B2518 60.290 -70.490 0.920 1.00 31.34 O
ATOM 9 C3' U B2518 62.589 -71.035 0.755 1.00 33.76 C
ATOM 10 O3' U B2518 63.580 -71.761 1.510 1.00 38.97 O
ATOM 11 C2' U B2518 61.862 -71.820 -0.335 1.00 36.81 C
ATOM 12 O2' U B2518 62.177 -73.208 -0.340 1.00 33.05 O
ATOM 13 C1' U B2518 60.382 -71.414 -0.143 1.00 34.66 C
ATOM 14 N1 U B2518 59.681 -70.828 -1.301 1.00 33.68 N
ATOM 15 C2 U B2518 59.250 -71.672 -2.321 1.00 41.40 C
ATOM 16 O2 U B2518 59.365 -72.885 -2.283 1.00 44.48 O
ATOM 17 N3 U B2518 58.661 -71.035 -3.388 1.00 43.06 N
ATOM 18 C4 U B2518 58.436 -69.678 -3.534 1.00 48.92 C
ATOM 19 O4 U B2518 57.916 -69.258 -4.569 1.00 59.23 O
ATOM 20 C5 U B2518 58.866 -68.879 -2.430 1.00 46.52 C
ATOM 21 C6 U B2518 59.460 -69.466 -1.379 1.00 43.38 C
ATOM 22 P A B2519 63.151 -72.851 2.634 1.00 44.61 P
ATOM 23 OP1 A B2519 61.900 -73.556 2.272 1.00 33.72 O
ATOM 24 OP2 A B2519 63.276 -72.223 3.981 1.00 35.57 O
ATOM 25 O5' A B2519 64.335 -73.898 2.554 1.00 42.14 O
TER
Atoms:
OP1: (52.948,-80.632,-11.055)
OP2: (52.988,-81.646,-8.709)
C3': (55.817,-76.478,-10.154)
C1': (54.610,-75.362,-8.480)
C5': (54.685,-78.693,-9.719)
O4': (53.948,-76.581,-8.755)
C8: (55.413,-76.659,-6.447)
O2': (55.013,-74.160,-10.526)
C6: (57.175,-74.343,-4.485)
C5: (56.458,-75.151,-5.380)
C4: (56.004,-74.552,-6.547)
P: (52.752,-80.483,-9.594)
C4': (54.505,-77.196,-9.934)
C2': (55.578,-75.077,-9.617)
C2: (56.868,-72.603,-5.999)
N1: (57.366,-73.040,-4.825)
N3: (56.180,-73.272,-6.928)
N6: (57.673,-74.794,-3.326)
N7: (56.080,-76.484,-5.338)
N9: (55.314,-75.524,-7.218)
O5': (53.570,-79.241,-9.022)
O3': (56.189,-76.514,-11.504)
OP2: (52.988,-81.646,-8.709)
C3': (55.817,-76.478,-10.154)
C1': (54.610,-75.362,-8.480)
C5': (54.685,-78.693,-9.719)
O4': (53.948,-76.581,-8.755)
C8: (55.413,-76.659,-6.447)
O2': (55.013,-74.160,-10.526)
C6: (57.175,-74.343,-4.485)
C5: (56.458,-75.151,-5.380)
C4: (56.004,-74.552,-6.547)
P: (52.752,-80.483,-9.594)
C4': (54.505,-77.196,-9.934)
C2': (55.578,-75.077,-9.617)
C2: (56.868,-72.603,-5.999)
N1: (57.366,-73.040,-4.825)
N3: (56.180,-73.272,-6.928)
N6: (57.673,-74.794,-3.326)
N7: (56.080,-76.484,-5.338)
N9: (55.314,-75.524,-7.218)
O5': (53.570,-79.241,-9.022)
O3': (56.189,-76.514,-11.504)
C4: (58.436,-69.678,-3.534)
N3: (58.661,-71.035,-3.388)
OP1: (64.118,-67.471,2.742)
OP2: (64.315,-67.026,0.200)
C2: (59.250,-71.672,-2.321)
C1': (60.382,-71.414,-0.143)
C3': (62.589,-71.035,0.755)
O5': (62.352,-68.287,1.151)
O4': (60.290,-70.490,0.920)
C5': (61.818,-69.112,2.202)
P: (63.474,-67.191,1.424)
C4': (61.509,-70.500,1.682)
C2': (61.862,-71.820,-0.335)
O2': (62.177,-73.208,-0.340)
N1: (59.681,-70.828,-1.301)
O4: (57.916,-69.258,-4.569)
O2: (59.365,-72.885,-2.283)
C6: (59.460,-69.466,-1.379)
C5: (58.866,-68.879,-2.430)
O3': (63.580,-71.761,1.510)
N3: (58.661,-71.035,-3.388)
OP1: (64.118,-67.471,2.742)
OP2: (64.315,-67.026,0.200)
C2: (59.250,-71.672,-2.321)
C1': (60.382,-71.414,-0.143)
C3': (62.589,-71.035,0.755)
O5': (62.352,-68.287,1.151)
O4': (60.290,-70.490,0.920)
C5': (61.818,-69.112,2.202)
P: (63.474,-67.191,1.424)
C4': (61.509,-70.500,1.682)
C2': (61.862,-71.820,-0.335)
O2': (62.177,-73.208,-0.340)
N1: (59.681,-70.828,-1.301)
O4: (57.916,-69.258,-4.569)
O2: (59.365,-72.885,-2.283)
C6: (59.460,-69.466,-1.379)
C5: (58.866,-68.879,-2.430)
O3': (63.580,-71.761,1.510)
Image (generated by PyMOL):