ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:02167:02219

Extra

PDB:
ATOM 1 O3' U A2166 90.670 51.471 78.010 1.00 56.07 O
ATOM 2 P A A2167 91.802 50.971 79.034 1.00 58.23 P
ATOM 3 OP1 A A2167 92.963 51.895 78.935 1.00 58.05 O
ATOM 4 OP2 A A2167 91.994 49.519 78.785 1.00 56.94 O
ATOM 5 O5' A A2167 91.133 51.181 80.467 1.00 57.36 O
ATOM 6 C5' A A2167 90.202 50.220 81.014 1.00 56.52 C
ATOM 7 C4' A A2167 89.145 50.927 81.833 1.00 55.85 C
ATOM 8 O4' A A2167 88.316 51.724 80.942 1.00 54.27 O
ATOM 9 C3' A A2167 88.173 50.035 82.603 1.00 56.32 C
ATOM 10 O3' A A2167 87.732 50.749 83.757 1.00 59.61 O
ATOM 11 C2' A A2167 86.986 49.970 81.651 1.00 54.99 C
ATOM 12 O2' A A2167 85.769 49.645 82.289 1.00 56.95 O
ATOM 13 C1' A A2167 86.965 51.413 81.168 1.00 53.11 C
ATOM 14 N9 A A2167 86.196 51.697 79.961 1.00 50.62 N
ATOM 15 C8 A A2167 85.296 52.719 79.793 1.00 50.08 C
ATOM 16 N7 A A2167 84.721 52.731 78.617 1.00 48.85 N
ATOM 17 C5 A A2167 85.284 51.648 77.963 1.00 48.87 C
ATOM 18 C6 A A2167 85.090 51.119 76.682 1.00 48.91 C
ATOM 19 N6 A A2167 84.245 51.636 75.788 1.00 48.34 N
ATOM 20 N1 A A2167 85.806 50.028 76.342 1.00 49.27 N
ATOM 21 C2 A A2167 86.662 49.517 77.236 1.00 49.68 C
ATOM 22 N3 A A2167 86.935 49.928 78.471 1.00 49.31 N
ATOM 23 C4 A A2167 86.202 51.007 78.777 1.00 49.25 C
ATOM 24 P U A2168 88.451 50.528 85.179 1.00 61.70 P
ATOM 25 OP1 U A2168 89.793 51.179 85.122 1.00 59.76 O
ATOM 26 OP2 U A2168 88.341 49.091 85.553 1.00 60.63 O
ATOM 27 O5' U A2168 87.534 51.376 86.169 1.00 60.10 O
TER

ATOM 1 O3' U B2218 83.496 42.570 70.620 1.00 49.67 O
ATOM 2 P U B2219 84.191 43.642 69.641 1.00 50.83 P
ATOM 3 OP1 U B2219 83.814 43.254 68.255 1.00 49.11 O
ATOM 4 OP2 U B2219 85.633 43.762 70.014 1.00 47.99 O
ATOM 5 O5' U B2219 83.481 45.032 69.982 1.00 51.70 O
ATOM 6 C5' U B2219 82.041 45.176 69.928 1.00 53.13 C
ATOM 7 C4' U B2219 81.624 46.525 70.483 1.00 52.78 C
ATOM 8 O4' U B2219 82.254 46.705 71.781 1.00 53.13 O
ATOM 9 C3' U B2219 82.002 47.763 69.669 1.00 52.62 C
ATOM 10 O3' U B2219 81.055 48.787 69.953 1.00 53.93 O
ATOM 11 C2' U B2219 83.325 48.178 70.295 1.00 52.55 C
ATOM 12 O2' U B2219 83.606 49.554 70.119 1.00 52.67 O
ATOM 13 C1' U B2219 83.052 47.873 71.767 1.00 52.15 C
ATOM 14 N1 U B2219 84.254 47.632 72.580 1.00 51.06 N
ATOM 15 C2 U B2219 84.527 48.521 73.602 1.00 49.83 C
ATOM 16 O2 U B2219 83.808 49.467 73.872 1.00 48.15 O
ATOM 17 N3 U B2219 85.674 48.257 74.304 1.00 50.01 N
ATOM 18 C4 U B2219 86.555 47.216 74.103 1.00 50.32 C
ATOM 19 O4 U B2219 87.572 47.138 74.796 1.00 50.84 O
ATOM 20 C5 U B2219 86.195 46.332 73.044 1.00 51.17 C
ATOM 21 C6 U B2219 85.086 46.565 72.334 1.00 51.24 C
ATOM 22 P G B2220 79.877 49.107 68.914 1.00 55.70 P
ATOM 23 OP1 G B2220 79.565 47.874 68.143 1.00 56.45 O
ATOM 24 OP2 G B2220 80.265 50.347 68.192 1.00 55.76 O
ATOM 25 O5' G B2220 78.631 49.432 69.856 1.00 54.89 O
TER

Atoms:
OP1: (92.963,51.895,78.935)
OP2: (91.994,49.519,78.785)
C3': (88.173,50.035,82.603)
C1': (86.965,51.413,81.168)
C5': (90.202,50.220,81.014)
O4': (88.316,51.724,80.942)
C8: (85.296,52.719,79.793)
O2': (85.769,49.645,82.289)
C6: (85.090,51.119,76.682)
C5: (85.284,51.648,77.963)
C4: (86.202,51.007,78.777)
P: (91.802,50.971,79.034)
C4': (89.145,50.927,81.833)
C2': (86.986,49.970,81.651)
C2: (86.662,49.517,77.236)
N1: (85.806,50.028,76.342)
N3: (86.935,49.928,78.471)
N6: (84.245,51.636,75.788)
N7: (84.721,52.731,78.617)
N9: (86.196,51.697,79.961)
O5': (91.133,51.181,80.467)
O3': (87.732,50.749,83.757)
C4: (86.555,47.216,74.103)
N3: (85.674,48.257,74.304)
OP1: (83.814,43.254,68.255)
OP2: (85.633,43.762,70.014)
C2: (84.527,48.521,73.602)
C1': (83.052,47.873,71.767)
C3': (82.002,47.763,69.669)
O5': (83.481,45.032,69.982)
O4': (82.254,46.705,71.781)
C5': (82.041,45.176,69.928)
P: (84.191,43.642,69.641)
C4': (81.624,46.525,70.483)
C2': (83.325,48.178,70.295)
O2': (83.606,49.554,70.119)
N1: (84.254,47.632,72.580)
O4: (87.572,47.138,74.796)
O2: (83.808,49.467,73.872)
C6: (85.086,46.565,72.334)
C5: (86.195,46.332,73.044)
O3': (81.055,48.787,69.953)
Image (generated by PyMOL):
PyMOL image
show in jmol